RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 ADD2P35612 726 aa20.1■□□□□ 0.81
SRGAP3-209ENST00000490889 NPLOC4Q8TAT6 608 aa20.1■□□□□ 0.81
SRGAP3-209ENST00000490889 LRCH3Q96II8 777 aa20.1■□□□□ 0.81
SRGAP3-209ENST00000490889 SLC15A5A6NIM6 579 aa20.09■□□□□ 0.81
SRGAP3-209ENST00000490889 RAB11FIP3O75154 756 aa20.09■□□□□ 0.81
SRGAP3-209ENST00000490889 MBD4O95243 580 aa20.09■□□□□ 0.81
SRGAP3-209ENST00000490889 GRB14Q14449 540 aa20.09■□□□□ 0.81
SRGAP3-209ENST00000490889 SIAH1Q8IUQ4 282 aa20.09■□□□□ 0.81
SRGAP3-209ENST00000490889 MYH8P13535 1937 aa20.09■□□□□ 0.81
SRGAP3-209ENST00000490889 CYP2D7A0A087X1C5 515 aa20.08■□□□□ 0.81
SRGAP3-209ENST00000490889 GLRX3O76003 335 aaKnown RBP20.08■□□□□ 0.81
SRGAP3-209ENST00000490889 HOXC6P09630 235 aa20.08■□□□□ 0.81
SRGAP3-209ENST00000490889 AKR1B1P15121 316 aa20.08■□□□□ 0.81
SRGAP3-209ENST00000490889 ATP5JP18859 108 aa20.08■□□□□ 0.81
SRGAP3-209ENST00000490889 ZNF236Q9UL36 1845 aa20.07■□□□□ 0.8
SRGAP3-209ENST00000490889 IGHA2P01877 340 aa20.07■□□□□ 0.8
SRGAP3-209ENST00000490889 BMP8BP34820 402 aa20.07■□□□□ 0.8
SRGAP3-209ENST00000490889 C20orf194Q5TEA3 1177 aa20.07■□□□□ 0.8
SRGAP3-209ENST00000490889 TMEM179Q6ZVK1 233 aa20.07■□□□□ 0.8
SRGAP3-209ENST00000490889 HAUS7Q99871 368 aa20.07■□□□□ 0.8
SRGAP3-209ENST00000490889 MOV10L1Q9BXT6 1211 aaKnown RBP20.07■□□□□ 0.8
SRGAP3-209ENST00000490889 COL6A3P12111 3177 aa20.06■□□□□ 0.8
SRGAP3-209ENST00000490889 MYH7P12883 1935 aa20.06■□□□□ 0.8
SRGAP3-209ENST00000490889 CYP2C19P33261 490 aa20.06■□□□□ 0.8
SRGAP3-209ENST00000490889 MAGEA10P43363 369 aaPredicted RBP20.06■□□□□ 0.8
SRGAP3-209ENST00000490889 COG2Q14746 738 aa20.06■□□□□ 0.8
SRGAP3-209ENST00000490889 LRRC26Q2I0M4 334 aa20.06■□□□□ 0.8
SRGAP3-209ENST00000490889 TRPV1Q8NER1 839 aa20.06■□□□□ 0.8
SRGAP3-209ENST00000490889 TANGO6Q9C0B7 1094 aa20.06■□□□□ 0.8
SRGAP3-209ENST00000490889 ATP8A2Q9NTI2 1148 aa20.06■□□□□ 0.8
SRGAP3-209ENST00000490889 SWAP70Q9UH65 585 aa20.06■□□□□ 0.8
SRGAP3-209ENST00000490889 IVNS1ABPQ9Y6Y0 642 aa20.06■□□□□ 0.8
SRGAP3-209ENST00000490889 PARP14Q460N5 1801 aa20.05■□□□□ 0.8
SRGAP3-209ENST00000490889 SMARCA5O60264 1052 aaPredicted RBP20.05■□□□□ 0.8
SRGAP3-209ENST00000490889 MFSD14CQ5VZR4 134 aa20.05■□□□□ 0.8
SRGAP3-209ENST00000490889 SPATC1LQ9H0A9 340 aa20.05■□□□□ 0.8
SRGAP3-209ENST00000490889 RCAN3Q9UKA8 241 aa20.05■□□□□ 0.8
SRGAP3-209ENST00000490889 ATP2B2Q01814 1243 aa20.04■□□□□ 0.8
SRGAP3-209ENST00000490889 C12orf60Q5U649 245 aa20.04■□□□□ 0.8
SRGAP3-209ENST00000490889 SPICE1Q8N0Z3 855 aa20.04■□□□□ 0.8
SRGAP3-209ENST00000490889 DDX20Q9UHI6 824 aaKnown RBP20.04■□□□□ 0.8
SRGAP3-209ENST00000490889 TMX2Q9Y320 296 aa20.04■□□□□ 0.8
SRGAP3-209ENST00000490889 USP17L12C9JPN9 530 aa20.03■□□□□ 0.8
SRGAP3-209ENST00000490889 USP17L21D6R901 530 aa20.03■□□□□ 0.8
SRGAP3-209ENST00000490889 ERCC3P19447 782 aa20.03■□□□□ 0.8
SRGAP3-209ENST00000490889 ADORA2AP29274 412 aa20.03■□□□□ 0.8
SRGAP3-209ENST00000490889 DSG3P32926 999 aa20.03■□□□□ 0.8
SRGAP3-209ENST00000490889 CDK8P49336 464 aa20.03■□□□□ 0.8
SRGAP3-209ENST00000490889 ICA1Q05084 483 aa20.03■□□□□ 0.8
SRGAP3-209ENST00000490889 UBE3CQ15386 1083 aa20.03■□□□□ 0.8
SRGAP3-209ENST00000490889 ATG4CQ96DT6 458 aa20.03■□□□□ 0.8
SRGAP3-209ENST00000490889 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.03■□□□□ 0.8
SRGAP3-209ENST00000490889 PUS7LQ9H0K6 701 aaKnown RBP20.03■□□□□ 0.8
SRGAP3-209ENST00000490889 VCPKMTQ9H867 229 aa20.03■□□□□ 0.8
SRGAP3-209ENST00000490889 HOXC10Q9NYD6 342 aa20.03■□□□□ 0.8
SRGAP3-209ENST00000490889 COBLO75128 1261 aa20.02■□□□□ 0.8
SRGAP3-209ENST00000490889 CYBAP13498 195 aa20.02■□□□□ 0.8
SRGAP3-209ENST00000490889 CNGA1P29973 690 aa20.02■□□□□ 0.8
SRGAP3-209ENST00000490889 C16orf86Q6ZW13 317 aa20.02■□□□□ 0.8
SRGAP3-209ENST00000490889 SHCBP1Q8NEM2 672 aa20.02■□□□□ 0.8
SRGAP3-209ENST00000490889 LPAR1Q92633 364 aa20.02■□□□□ 0.8
SRGAP3-209ENST00000490889 ARHGEF10LQ9HCE6 1279 aa20.02■□□□□ 0.8
SRGAP3-209ENST00000490889 FLOT1O75955 427 aa20.01■□□□□ 0.79
SRGAP3-209ENST00000490889 CTR9Q6PD62 1173 aa20.01■□□□□ 0.79
SRGAP3-209ENST00000490889 DPP9Q86TI2 863 aa20.01■□□□□ 0.79
SRGAP3-209ENST00000490889 LRRCC1Q9C099 1032 aa20.01■□□□□ 0.79
SRGAP3-209ENST00000490889 SLC4A4Q9Y6R1 1079 aa20.01■□□□□ 0.79
SRGAP3-209ENST00000490889 COL11A1P12107 1806 aaPredicted RBP20.01■□□□□ 0.79
SRGAP3-209ENST00000490889 CCDC17Q96LX7 622 aa20■□□□□ 0.79
SRGAP3-209ENST00000490889 SENP6Q9GZR1 1112 aaPredicted RBP20■□□□□ 0.79
SRGAP3-209ENST00000490889 CHMP4BQ9H444 224 aaKnown RBP20■□□□□ 0.79
SRGAP3-209ENST00000490889 WDR46O15213 610 aaKnown RBP19.99■□□□□ 0.79
SRGAP3-209ENST00000490889 STRNO43815 780 aa19.99■□□□□ 0.79
SRGAP3-209ENST00000490889 MSCO60682 206 aa19.99■□□□□ 0.79
SRGAP3-209ENST00000490889 EEF2P13639 858 aaKnown RBP19.99■□□□□ 0.79
SRGAP3-209ENST00000490889 PLS1Q14651 629 aa19.99■□□□□ 0.79
SRGAP3-209ENST00000490889 TMEM132BQ14DG7 1078 aa19.99■□□□□ 0.79
SRGAP3-209ENST00000490889 ANO1Q5XXA6 986 aa19.99■□□□□ 0.79
SRGAP3-209ENST00000490889 OLFML2BQ68BL8 750 aa19.99■□□□□ 0.79
SRGAP3-209ENST00000490889 SAMD1Q6SPF0 538 aaPredicted RBP19.99■□□□□ 0.79
SRGAP3-209ENST00000490889 TDHQ8IZJ6 230 aa19.99■□□□□ 0.79
SRGAP3-209ENST00000490889 MB21D1Q8N884 522 aa19.99■□□□□ 0.79
SRGAP3-209ENST00000490889 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.99■□□□□ 0.79
SRGAP3-209ENST00000490889 UBE2OQ9C0C9 1292 aaKnown RBP19.99■□□□□ 0.79
SRGAP3-209ENST00000490889 FBXO28Q9NVF7 368 aa19.99■□□□□ 0.79
SRGAP3-209ENST00000490889 GREB1LQ9C091 1923 aaPredicted RBP19.99■□□□□ 0.79
SRGAP3-209ENST00000490889 LAMA2P24043 3122 aaKnown RBP19.99■□□□□ 0.79
SRGAP3-209ENST00000490889 ATN1P54259 1190 aaPredicted RBP19.98■□□□□ 0.79
SRGAP3-209ENST00000490889 MDM2Q00987 491 aaPredicted RBP19.98■□□□□ 0.79
SRGAP3-209ENST00000490889 LRIT3Q3SXY7 679 aa19.98■□□□□ 0.79
SRGAP3-209ENST00000490889 NCAPG2Q86XI2 1143 aa19.98■□□□□ 0.79
SRGAP3-209ENST00000490889 MROH8Q9H579 483 aa19.98■□□□□ 0.79
SRGAP3-209ENST00000490889 SH2D4AQ9H788 454 aa19.98■□□□□ 0.79
SRGAP3-209ENST00000490889 DNM1LO00429 736 aa19.97■□□□□ 0.79
SRGAP3-209ENST00000490889 PRAMEF19Q5SWL8 479 aa19.97■□□□□ 0.79
SRGAP3-209ENST00000490889 GJC2Q5T442 439 aaPredicted RBP19.97■□□□□ 0.79
SRGAP3-209ENST00000490889 TSHZ3Q63HK5 1081 aa19.97■□□□□ 0.79
SRGAP3-209ENST00000490889 AMOTL1Q8IY63 956 aa19.97■□□□□ 0.79
SRGAP3-209ENST00000490889 STRBPQ96SI9 672 aaKnown RBP19.97■□□□□ 0.79
SRGAP3-209ENST00000490889 ADAMTS5Q9UNA0 930 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 303.9 ms