RNA–Protein interactions for RNA: ENST00000490668.5

SFPQ-210, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 434 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-210ENST00000490668 CHMP3Q9Y3E7 222 aa5.36□□□□□ -1.55
SFPQ-210ENST00000490668 USP3Q9Y6I4 520 aa5.36□□□□□ -1.55
SFPQ-210ENST00000490668 ARFGEF1Q9Y6D6 1849 aa5.36□□□□□ -1.55
SFPQ-210ENST00000490668 CACNA1SQ13698 1873 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 LRRC37AA6NMS7 1700 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 RTL9Q8NET4 1388 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 UTYO14607 1347 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 KLRG2A4D1S0 409 aaPredicted RBP5.35□□□□□ -1.55
SFPQ-210ENST00000490668 H7C1W4 665 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 PPEF1O14829 653 aaPredicted RBP5.35□□□□□ -1.55
SFPQ-210ENST00000490668 SH3BP5O60239 455 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 MAP3K10Q02779 954 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 GRAPQ13588 217 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 MTFR1Q15390 333 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 SF3B3Q15393 1217 aaKnown RBP5.35□□□□□ -1.55
SFPQ-210ENST00000490668 CCDC93Q567U6 631 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 DMRTA1Q5VZB9 504 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 CCSAPQ6IQ19 270 aaPredicted RBP5.35□□□□□ -1.55
SFPQ-210ENST00000490668 POTEEQ6S8J3 1075 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 KRT26Q7Z3Y9 468 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 BPHLQ86WA6 291 aaPredicted RBP5.35□□□□□ -1.55
SFPQ-210ENST00000490668 TRMT44Q8IYL2 757 aaKnown RBP5.35□□□□□ -1.55
SFPQ-210ENST00000490668 GRAPLQ8TC17 118 aaPredicted RBP5.35□□□□□ -1.55
SFPQ-210ENST00000490668 CCDC74AQ96AQ1 378 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 CCDC136Q96JN2 1154 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 ZFRQ96KR1 1074 aaKnown RBP5.35□□□□□ -1.55
SFPQ-210ENST00000490668 CRAMP1Q96RY5 1269 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 CDC5LQ99459 802 aaKnown RBP5.35□□□□□ -1.55
SFPQ-210ENST00000490668 RSRP1Q9BUV0 290 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 PRR14Q9BWN1 585 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 PLA2G12BQ9BX93 195 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 PNMA2Q9UL42 364 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 MYH3P11055 1940 aa5.35□□□□□ -1.55
SFPQ-210ENST00000490668 HAX1O00165 279 aa5.34□□□□□ -1.55
SFPQ-210ENST00000490668 GNAI3P08754 354 aa5.34□□□□□ -1.55
SFPQ-210ENST00000490668 NBPF7P0C2Y1 421 aaPredicted RBP5.34□□□□□ -1.55
SFPQ-210ENST00000490668 YBX3P16989 372 aaKnown RBP eCLIP5.34□□□□□ -1.55
SFPQ-210ENST00000490668 KCNA3P22001 575 aa5.34□□□□□ -1.55
SFPQ-210ENST00000490668 HOXA10P31260 410 aaPredicted RBP5.34□□□□□ -1.55
SFPQ-210ENST00000490668 IGHMBP2P38935 993 aaKnown RBP5.34□□□□□ -1.55
SFPQ-210ENST00000490668 CASP7P55210 303 aa5.34□□□□□ -1.55
SFPQ-210ENST00000490668 RAB15P59190 212 aa5.34□□□□□ -1.55
SFPQ-210ENST00000490668 PSMA6P60900 246 aaKnown RBP5.34□□□□□ -1.55
SFPQ-210ENST00000490668 EXOSC10Q01780 885 aaKnown RBP5.34□□□□□ -1.55
SFPQ-210ENST00000490668 ZFYVE27Q5T4F4 411 aa5.34□□□□□ -1.55
SFPQ-210ENST00000490668 INTS3Q68E01 1043 aaKnown RBP5.34□□□□□ -1.55
SFPQ-210ENST00000490668 ANKRD18AQ8IVF6 992 aa5.34□□□□□ -1.55
SFPQ-210ENST00000490668 SYNE4Q8N205 404 aa5.34□□□□□ -1.55
SFPQ-210ENST00000490668 TMEM57Q8N5G2 664 aa5.34□□□□□ -1.55
SFPQ-210ENST00000490668 BAP1Q92560 729 aa5.34□□□□□ -1.55
SFPQ-210ENST00000490668 JARID2Q92833 1246 aaPredicted RBP5.34□□□□□ -1.55
SFPQ-210ENST00000490668 IL17RAQ96F46 866 aa5.34□□□□□ -1.55
SFPQ-210ENST00000490668 CEP89Q96ST8 783 aa5.34□□□□□ -1.55
SFPQ-210ENST00000490668 APBA2Q99767 749 aa5.34□□□□□ -1.55
SFPQ-210ENST00000490668 TAOK3Q9H2K8 898 aa5.34□□□□□ -1.55
SFPQ-210ENST00000490668 CHMP4BQ9H444 224 aaKnown RBP5.34□□□□□ -1.55
SFPQ-210ENST00000490668 DDX19BQ9UMR2 479 aa5.34□□□□□ -1.55
SFPQ-210ENST00000490668 LTBP3Q9NS15 1303 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 ANKRD18BA2A2Z9 1011 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 ERVH48-1M5A8F1 160 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 SMAD7O15105 426 aaKnown RBP5.33□□□□□ -1.56
SFPQ-210ENST00000490668 TSPAN6O43657 245 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 BBOX1O75936 387 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 ITGA6P23229 1130 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 RRP1P56182 461 aaKnown RBP5.33□□□□□ -1.56
SFPQ-210ENST00000490668 IFIT5Q13325 482 aaKnown RBP5.33□□□□□ -1.56
SFPQ-210ENST00000490668 DGKZQ13574 1117 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 PDE3AQ14432 1141 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 MVPQ14764 893 aaKnown RBP5.33□□□□□ -1.56
SFPQ-210ENST00000490668 NFE2Q16621 373 aaPredicted RBP5.33□□□□□ -1.56
SFPQ-210ENST00000490668 CCDC57Q2TAC2 916 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 LINC01559Q495D7 138 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 LONRF3Q496Y0 759 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 SH3PXD2AQ5TCZ1 1133 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 RTKN2Q8IZC4 609 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 JMYQ8N9B5 988 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 TTLL11Q8NHH1 800 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 GPR152Q8TDT2 470 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 CELF1Q92879 486 aaKnown RBP5.33□□□□□ -1.56
SFPQ-210ENST00000490668 ANAPC16Q96DE5 110 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 SUCLG2Q96I99 432 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 SHDQ96IW2 340 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 MEIS3Q99687 375 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 NOC4LQ9BVI4 516 aaKnown RBP5.33□□□□□ -1.56
SFPQ-210ENST00000490668 USP44Q9H0E7 712 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 BICC1Q9H694 974 aaKnown RBP5.33□□□□□ -1.56
SFPQ-210ENST00000490668 GREM2Q9H772 168 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 CHST12Q9NRB3 414 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 GNL3LQ9NVN8 582 aaKnown RBP5.33□□□□□ -1.56
SFPQ-210ENST00000490668 KLK14Q9P0G3 267 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 TCEAL9Q9UHQ7 104 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 TNNQ9UQP3 1299 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 VPS9D1Q9Y2B5 631 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 ATP6V0A2Q9Y487 856 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 TIAM2Q8IVF5 1701 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 DUOX1Q9NRD9 1551 aa5.33□□□□□ -1.56
SFPQ-210ENST00000490668 SNED1Q8TER0 1413 aa5.32□□□□□ -1.56
SFPQ-210ENST00000490668 COL4A1P02462 1669 aa5.32□□□□□ -1.56
SFPQ-210ENST00000490668 A6NJY4 79 aa5.32□□□□□ -1.56
SFPQ-210ENST00000490668 BHMG1C9JSJ3 638 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms