RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 PRDM5Q9NQX1 630 aaPredicted RBP23.97■■□□□ 1.43
UPK3B-205ENST00000490360 TMEM265A0A087WTH1 108 aa23.96■■□□□ 1.43
UPK3B-205ENST00000490360 SHMT1P34896 483 aa23.96■■□□□ 1.43
UPK3B-205ENST00000490360 DBNLQ9UJU6 430 aaKnown RBP23.96■■□□□ 1.43
UPK3B-205ENST00000490360 NOP58Q9Y2X3 529 aaKnown RBP23.96■■□□□ 1.43
UPK3B-205ENST00000490360 SYMPKQ92797 1274 aaKnown RBP23.95■■□□□ 1.42
UPK3B-205ENST00000490360 FRAT1Q92837 279 aaPredicted RBP23.95■■□□□ 1.42
UPK3B-205ENST00000490360 BADQ92934 168 aa23.95■■□□□ 1.42
UPK3B-205ENST00000490360 NRBP1Q9UHY1 535 aa23.95■■□□□ 1.42
UPK3B-205ENST00000490360 POLR3DP05423 398 aaPredicted RBP23.94■■□□□ 1.42
UPK3B-205ENST00000490360 ERCC3P19447 782 aa23.94■■□□□ 1.42
UPK3B-205ENST00000490360 TRIM60Q495X7 471 aa23.94■■□□□ 1.42
UPK3B-205ENST00000490360 C9orf50Q5SZB4 431 aa23.94■■□□□ 1.42
UPK3B-205ENST00000490360 TANGO6Q9C0B7 1094 aa23.94■■□□□ 1.42
UPK3B-205ENST00000490360 PDLIM7Q9NR12 457 aa23.94■■□□□ 1.42
UPK3B-205ENST00000490360 GUCY1A2P33402 732 aa23.93■■□□□ 1.42
UPK3B-205ENST00000490360 SEPT2Q15019 361 aa23.93■■□□□ 1.42
UPK3B-205ENST00000490360 CLUAP1Q96AJ1 413 aa23.93■■□□□ 1.42
UPK3B-205ENST00000490360 TACC3Q9Y6A5 838 aa23.93■■□□□ 1.42
UPK3B-205ENST00000490360 ADCYAP1R1P41586 468 aa23.92■■□□□ 1.42
UPK3B-205ENST00000490360 PLCD1P51178 756 aa23.92■■□□□ 1.42
UPK3B-205ENST00000490360 GABPAQ06546 454 aa23.92■■□□□ 1.42
UPK3B-205ENST00000490360 LRRC41Q15345 812 aa23.92■■□□□ 1.42
UPK3B-205ENST00000490360 A0A0G2JMZ2 1700 aa23.91■■□□□ 1.42
UPK3B-205ENST00000490360 COBLO75128 1261 aa23.91■■□□□ 1.42
UPK3B-205ENST00000490360 MYCNP04198 464 aaPredicted RBP23.91■■□□□ 1.42
UPK3B-205ENST00000490360 CCDC8Q9H0W5 538 aaPredicted RBP23.91■■□□□ 1.42
UPK3B-205ENST00000490360 SH2D4AQ9H788 454 aa23.91■■□□□ 1.42
UPK3B-205ENST00000490360 MPHOSPH10O00566 681 aaKnown RBP23.9■■□□□ 1.42
UPK3B-205ENST00000490360 FCER1AP12319 257 aa23.9■■□□□ 1.42
UPK3B-205ENST00000490360 FOSL2P15408 326 aa23.9■■□□□ 1.42
UPK3B-205ENST00000490360 TTF1Q15361 905 aaPredicted RBP23.9■■□□□ 1.42
UPK3B-205ENST00000490360 ANO1Q5XXA6 986 aa23.9■■□□□ 1.42
UPK3B-205ENST00000490360 ZKSCAN2Q63HK3 967 aa23.9■■□□□ 1.42
UPK3B-205ENST00000490360 TMEM179Q6ZVK1 233 aa23.9■■□□□ 1.42
UPK3B-205ENST00000490360 TMEM57Q8N5G2 664 aa23.9■■□□□ 1.42
UPK3B-205ENST00000490360 EAF2Q96CJ1 260 aaPredicted RBP23.9■■□□□ 1.42
UPK3B-205ENST00000490360 RIOK1Q9BRS2 568 aaKnown RBP23.9■■□□□ 1.42
UPK3B-205ENST00000490360 CRNKL1Q9BZJ0 848 aaKnown RBP23.9■■□□□ 1.42
UPK3B-205ENST00000490360 TTYH1Q9H313 450 aaPredicted RBP23.9■■□□□ 1.42
UPK3B-205ENST00000490360 PRDM6Q9NQX0 595 aa23.9■■□□□ 1.42
UPK3B-205ENST00000490360 PHF24Q9UPV7 400 aa23.9■■□□□ 1.42
UPK3B-205ENST00000490360 MAGEB6P1A0A0J9YX57 407 aa23.89■■□□□ 1.41
UPK3B-205ENST00000490360 TRIM43BA6NCK2 446 aa23.89■■□□□ 1.41
UPK3B-205ENST00000490360 BCAR3O75815 825 aa23.89■■□□□ 1.41
UPK3B-205ENST00000490360 SLC25A27O95847 323 aa23.89■■□□□ 1.41
UPK3B-205ENST00000490360 RARBP10826 455 aa23.89■■□□□ 1.41
UPK3B-205ENST00000490360 DSG3P32926 999 aa23.89■■□□□ 1.41
UPK3B-205ENST00000490360 RNF180Q86T96 592 aa23.89■■□□□ 1.41
UPK3B-205ENST00000490360 NCAPG2Q86XI2 1143 aa23.89■■□□□ 1.41
UPK3B-205ENST00000490360 MYLIPQ8WY64 445 aa23.89■■□□□ 1.41
UPK3B-205ENST00000490360 TRIM43Q96BQ3 446 aaPredicted RBP23.89■■□□□ 1.41
UPK3B-205ENST00000490360 MAML3Q96JK9 1138 aa23.89■■□□□ 1.41
UPK3B-205ENST00000490360 TLR7Q9NYK1 1049 aaKnown RBP23.89■■□□□ 1.41
UPK3B-205ENST00000490360 SWAP70Q9UH65 585 aa23.89■■□□□ 1.41
UPK3B-205ENST00000490360 TTC28Q96AY4 2481 aa23.89■■□□□ 1.41
UPK3B-205ENST00000490360 ZNFX1Q9P2E3 1918 aaKnown RBP23.88■■□□□ 1.41
UPK3B-205ENST00000490360 NAV1Q8NEY1 1877 aa23.88■■□□□ 1.41
UPK3B-205ENST00000490360 A0A1W2PRG0 241 aa23.88■■□□□ 1.41
UPK3B-205ENST00000490360 CLTBP09497 229 aa23.88■■□□□ 1.41
UPK3B-205ENST00000490360 TLE2Q04725 743 aa23.88■■□□□ 1.41
UPK3B-205ENST00000490360 PLS1Q14651 629 aa23.88■■□□□ 1.41
UPK3B-205ENST00000490360 FERMT2Q96AC1 680 aa23.88■■□□□ 1.41
UPK3B-205ENST00000490360 RNPC3Q96LT9 517 aaKnown RBP23.88■■□□□ 1.41
UPK3B-205ENST00000490360 ARHGEF10LQ9HCE6 1279 aa23.88■■□□□ 1.41
UPK3B-205ENST00000490360 MCM9Q9NXL9 1143 aa23.88■■□□□ 1.41
UPK3B-205ENST00000490360 FLOT1O75955 427 aa23.87■■□□□ 1.41
UPK3B-205ENST00000490360 FAM47AQ5JRC9 791 aa23.87■■□□□ 1.41
UPK3B-205ENST00000490360 SH3RF1Q7Z6J0 888 aa23.87■■□□□ 1.41
UPK3B-205ENST00000490360 ERC1Q8IUD2 1116 aa23.87■■□□□ 1.41
UPK3B-205ENST00000490360 ANTXR1Q9H6X2 564 aa23.87■■□□□ 1.41
UPK3B-205ENST00000490360 XPNPEP3Q9NQH7 507 aa23.87■■□□□ 1.41
UPK3B-205ENST00000490360 TNNQ9UQP3 1299 aa23.87■■□□□ 1.41
UPK3B-205ENST00000490360 DIS3Q9Y2L1 958 aaKnown RBP23.87■■□□□ 1.41
UPK3B-205ENST00000490360 SMCHD1A6NHR9 2005 aa23.87■■□□□ 1.41
UPK3B-205ENST00000490360 CDH23Q9H251 3354 aa23.87■■□□□ 1.41
UPK3B-205ENST00000490360 SPTBN5Q9NRC6 3674 aaKnown RBP23.87■■□□□ 1.41
UPK3B-205ENST00000490360 KIAA0355O15063 1070 aa23.86■■□□□ 1.41
UPK3B-205ENST00000490360 PRAMEF19Q5SWL8 479 aa23.86■■□□□ 1.41
UPK3B-205ENST00000490360 RAG1P15918 1043 aa23.85■■□□□ 1.41
UPK3B-205ENST00000490360 TMX2Q9Y320 296 aa23.85■■□□□ 1.41
UPK3B-205ENST00000490360 ROBO3Q96MS0 1386 aa23.85■■□□□ 1.41
UPK3B-205ENST00000490360 WDR46O15213 610 aaKnown RBP23.84■■□□□ 1.41
UPK3B-205ENST00000490360 COPB2P35606 906 aa23.84■■□□□ 1.41
UPK3B-205ENST00000490360 SLC9C2Q5TAH2 1124 aa23.84■■□□□ 1.41
UPK3B-205ENST00000490360 TOX2Q96NM4 488 aa23.84■■□□□ 1.41
UPK3B-205ENST00000490360 VCPKMTQ9H867 229 aa23.84■■□□□ 1.41
UPK3B-205ENST00000490360 MYH8P13535 1937 aa23.84■■□□□ 1.41
UPK3B-205ENST00000490360 FPGSQ05932 587 aa23.83■■□□□ 1.41
UPK3B-205ENST00000490360 ATG4CQ96DT6 458 aa23.83■■□□□ 1.41
UPK3B-205ENST00000490360 CCDC17Q96LX7 622 aa23.83■■□□□ 1.41
UPK3B-205ENST00000490360 TINF2Q9BSI4 451 aa23.83■■□□□ 1.41
UPK3B-205ENST00000490360 TSEN34Q9BSV6 310 aaKnown RBP23.83■■□□□ 1.41
UPK3B-205ENST00000490360 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.82■■□□□ 1.4
UPK3B-205ENST00000490360 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.82■■□□□ 1.4
UPK3B-205ENST00000490360 PDE6AP16499 860 aa23.82■■□□□ 1.4
UPK3B-205ENST00000490360 ICA1Q05084 483 aa23.82■■□□□ 1.4
UPK3B-205ENST00000490360 KCTD2Q14681 263 aa23.82■■□□□ 1.4
UPK3B-205ENST00000490360 HSP90AB4PQ58FF6 505 aa23.82■■□□□ 1.4
UPK3B-205ENST00000490360 AACSQ86V21 672 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms