RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 FGBP02675 491 aa18.74■□□□□ 0.59
UFD1-209ENST00000489406 CATSPERGQ6ZRH7 1159 aa18.74■□□□□ 0.59
UFD1-209ENST00000489406 CERS4Q9HA82 394 aa18.74■□□□□ 0.59
UFD1-209ENST00000489406 IL23AQ9NPF7 189 aa18.74■□□□□ 0.59
UFD1-209ENST00000489406 PI4KBQ9UBF8 816 aa18.74■□□□□ 0.59
UFD1-209ENST00000489406 ZBTB21Q9ULJ3 1066 aa18.74■□□□□ 0.59
UFD1-209ENST00000489406 EYA2O00167 538 aa18.73■□□□□ 0.59
UFD1-209ENST00000489406 STRNO43815 780 aa18.73■□□□□ 0.59
UFD1-209ENST00000489406 ST18O60284 1047 aa18.73■□□□□ 0.59
UFD1-209ENST00000489406 ACLYP53396 1101 aa18.73■□□□□ 0.59
UFD1-209ENST00000489406 FOXK2Q01167 660 aa18.73■□□□□ 0.59
UFD1-209ENST00000489406 MECOMQ03112 1051 aa18.73■□□□□ 0.59
UFD1-209ENST00000489406 OTOP2Q7RTS6 562 aa18.73■□□□□ 0.59
UFD1-209ENST00000489406 GJD3Q8N144 294 aa18.73■□□□□ 0.59
UFD1-209ENST00000489406 ATP2B3Q16720 1220 aa18.72■□□□□ 0.59
UFD1-209ENST00000489406 LBX2Q6XYB7 198 aa18.72■□□□□ 0.59
UFD1-209ENST00000489406 NUP133Q8WUM0 1156 aa18.72■□□□□ 0.59
UFD1-209ENST00000489406 LENG1Q96BZ8 264 aaPredicted RBP18.72■□□□□ 0.59
UFD1-209ENST00000489406 MOV10L1Q9BXT6 1211 aaKnown RBP18.72■□□□□ 0.59
UFD1-209ENST00000489406 SLC5A4Q9NY91 659 aa18.72■□□□□ 0.59
UFD1-209ENST00000489406 CACNA1FO60840 1977 aa18.72■□□□□ 0.59
UFD1-209ENST00000489406 ALADP13716 330 aa18.71■□□□□ 0.59
UFD1-209ENST00000489406 SPTY2D1Q68D10 685 aaPredicted RBP18.71■□□□□ 0.59
UFD1-209ENST00000489406 ZNF384Q8TF68 577 aa18.71■□□□□ 0.59
UFD1-209ENST00000489406 MAML3Q96JK9 1138 aa18.71■□□□□ 0.59
UFD1-209ENST00000489406 C12orf42Q96LP6 360 aa18.71■□□□□ 0.59
UFD1-209ENST00000489406 TSEN34Q9BSV6 310 aaKnown RBP18.71■□□□□ 0.59
UFD1-209ENST00000489406 DNAJC18Q9H819 358 aa18.71■□□□□ 0.59
UFD1-209ENST00000489406 PCDHA11Q9Y5I1 949 aa18.71■□□□□ 0.59
UFD1-209ENST00000489406 ZDBF2Q9HCK1 2354 aa18.71■□□□□ 0.59
UFD1-209ENST00000489406 SPDYE16A6NNV3 312 aaPredicted RBP18.7■□□□□ 0.58
UFD1-209ENST00000489406 SSTR3P32745 418 aaPredicted RBP18.7■□□□□ 0.58
UFD1-209ENST00000489406 CYP2C18P33260 490 aa18.7■□□□□ 0.58
UFD1-209ENST00000489406 TEX11Q8IYF3 940 aa18.7■□□□□ 0.58
UFD1-209ENST00000489406 ANKS1AQ92625 1134 aa18.7■□□□□ 0.58
UFD1-209ENST00000489406 FEZ1Q99689 392 aa18.7■□□□□ 0.58
UFD1-209ENST00000489406 GINM1Q9NU53 330 aa18.7■□□□□ 0.58
UFD1-209ENST00000489406 ZNF236Q9UL36 1845 aa18.7■□□□□ 0.58
UFD1-209ENST00000489406 EPOPA6NHQ4 379 aa18.69■□□□□ 0.58
UFD1-209ENST00000489406 ADAMTS4O75173 837 aa18.69■□□□□ 0.58
UFD1-209ENST00000489406 VAMP4O75379 141 aa18.69■□□□□ 0.58
UFD1-209ENST00000489406 ERCC3P19447 782 aa18.69■□□□□ 0.58
UFD1-209ENST00000489406 RASGRF1Q13972 1273 aa18.69■□□□□ 0.58
UFD1-209ENST00000489406 ERICH6Q7L0X2 663 aa18.69■□□□□ 0.58
UFD1-209ENST00000489406 FAM178BQ8IXR5 827 aa18.69■□□□□ 0.58
UFD1-209ENST00000489406 CRACR2BQ8N4Y2 399 aaPredicted RBP18.69■□□□□ 0.58
UFD1-209ENST00000489406 SLC4A7Q9Y6M7 1214 aa18.69■□□□□ 0.58
UFD1-209ENST00000489406 MROH7Q68CQ1 1323 aa18.69■□□□□ 0.58
UFD1-209ENST00000489406 SIPA1L1O43166 1804 aa18.68■□□□□ 0.58
UFD1-209ENST00000489406 MAP4K4O95819 1239 aaPredicted RBP18.68■□□□□ 0.58
UFD1-209ENST00000489406 TAL1P17542 331 aaPredicted RBP18.68■□□□□ 0.58
UFD1-209ENST00000489406 VCAM1P19320 739 aa18.68■□□□□ 0.58
UFD1-209ENST00000489406 CDK7P50613 346 aa18.68■□□□□ 0.58
UFD1-209ENST00000489406 CCDC102BQ68D86 513 aa18.68■□□□□ 0.58
UFD1-209ENST00000489406 ATG9AQ7Z3C6 839 aa18.68■□□□□ 0.58
UFD1-209ENST00000489406 TRIM34Q9BYJ4 488 aa18.68■□□□□ 0.58
UFD1-209ENST00000489406 DHX36Q9H2U1 1008 aaKnown RBP18.68■□□□□ 0.58
UFD1-209ENST00000489406 USP34Q70CQ2 3546 aa18.68■□□□□ 0.58
UFD1-209ENST00000489406 CFAP54Q96N23 3096 aa18.68■□□□□ 0.58
UFD1-209ENST00000489406 CA3P07451 260 aa18.67■□□□□ 0.58
UFD1-209ENST00000489406 ADORA1P30542 326 aa18.67■□□□□ 0.58
UFD1-209ENST00000489406 KCNA10Q16322 511 aa18.67■□□□□ 0.58
UFD1-209ENST00000489406 FOXP4Q8IVH2 680 aaPredicted RBP18.67■□□□□ 0.58
UFD1-209ENST00000489406 VTI1AQ96AJ9 217 aa18.67■□□□□ 0.58
UFD1-209ENST00000489406 A0A0G2JMZ2 1700 aa18.66■□□□□ 0.58
UFD1-209ENST00000489406 MOXD2PA6NHM9 499 aa18.66■□□□□ 0.58
UFD1-209ENST00000489406 GH2P01242 217 aa18.66■□□□□ 0.58
UFD1-209ENST00000489406 LDHCP07864 332 aa18.66■□□□□ 0.58
UFD1-209ENST00000489406 RFX5P48382 616 aaPredicted RBP18.66■□□□□ 0.58
UFD1-209ENST00000489406 SH3RF3Q8TEJ3 882 aaPredicted RBP18.66■□□□□ 0.58
UFD1-209ENST00000489406 ARNTL2Q8WYA1 636 aa18.66■□□□□ 0.58
UFD1-209ENST00000489406 GLT1D1Q96MS3 346 aa18.66■□□□□ 0.58
UFD1-209ENST00000489406 SPATC1LQ9H0A9 340 aa18.66■□□□□ 0.58
UFD1-209ENST00000489406 RPAP3Q9H6T3 665 aaPredicted RBP18.66■□□□□ 0.58
UFD1-209ENST00000489406 NRBP1Q9UHY1 535 aa18.66■□□□□ 0.58
UFD1-209ENST00000489406 ZBBXA8MT70 800 aa18.65■□□□□ 0.58
UFD1-209ENST00000489406 AKR1A1P14550 325 aa18.65■□□□□ 0.58
UFD1-209ENST00000489406 USP14P54578 494 aa18.65■□□□□ 0.58
UFD1-209ENST00000489406 TMEM67Q5HYA8 995 aa18.65■□□□□ 0.58
UFD1-209ENST00000489406 SHCBP1Q8NEM2 672 aa18.65■□□□□ 0.58
UFD1-209ENST00000489406 SIL1Q9H173 461 aa18.65■□□□□ 0.58
UFD1-209ENST00000489406 CEP126Q9P2H0 1117 aa18.65■□□□□ 0.58
UFD1-209ENST00000489406 ELP1O95163 1332 aa18.65■□□□□ 0.58
UFD1-209ENST00000489406 SYNRGQ9UMZ2 1314 aa18.65■□□□□ 0.58
UFD1-209ENST00000489406 TLR3O15455 904 aaKnown RBP18.64■□□□□ 0.57
UFD1-209ENST00000489406 ZNF865P0CJ78 1059 aaPredicted RBP18.64■□□□□ 0.57
UFD1-209ENST00000489406 ATP2A2P16615 1042 aaKnown RBP18.64■□□□□ 0.57
UFD1-209ENST00000489406 GSTO1P78417 241 aa18.64■□□□□ 0.57
UFD1-209ENST00000489406 METTL16Q86W50 562 aaKnown RBP18.64■□□□□ 0.57
UFD1-209ENST00000489406 NCAPG2Q86XI2 1143 aa18.64■□□□□ 0.57
UFD1-209ENST00000489406 FAM126BQ8IXS8 530 aa18.64■□□□□ 0.57
UFD1-209ENST00000489406 KLHDC9Q8NEP7 349 aa18.64■□□□□ 0.57
UFD1-209ENST00000489406 CDCA7LQ96GN5 454 aa18.64■□□□□ 0.57
UFD1-209ENST00000489406 TINF2Q9BSI4 451 aa18.64■□□□□ 0.57
UFD1-209ENST00000489406 BRWD1Q9NSI6 2320 aa18.64■□□□□ 0.57
UFD1-209ENST00000489406 UMODL1Q5DID0 1318 aa18.64■□□□□ 0.57
UFD1-209ENST00000489406 ZNF318Q5VUA4 2279 aa18.63■□□□□ 0.57
UFD1-209ENST00000489406 MYADML2A6NDP7 307 aa18.63■□□□□ 0.57
UFD1-209ENST00000489406 ARVCFO00192 962 aa18.63■□□□□ 0.57
UFD1-209ENST00000489406 DCXO43602 365 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms