RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 TRIM29Q14134 588 aa20.92■□□□□ 0.94
CD40-206ENST00000489304 RRP1BQ14684 758 aaKnown RBP20.92■□□□□ 0.94
CD40-206ENST00000489304 GRM4Q14833 912 aa20.92■□□□□ 0.94
CD40-206ENST00000489304 FKBP1CQ5VVH2 108 aa20.92■□□□□ 0.94
CD40-206ENST00000489304 BRAPQ7Z569 592 aa20.92■□□□□ 0.94
CD40-206ENST00000489304 METTL16Q86W50 562 aaKnown RBP20.92■□□□□ 0.94
CD40-206ENST00000489304 GZF1Q9H116 711 aaPredicted RBP20.92■□□□□ 0.94
CD40-206ENST00000489304 TFIP11Q9UBB9 837 aaKnown RBP20.92■□□□□ 0.94
CD40-206ENST00000489304 CFAP45Q9UL16 551 aa20.92■□□□□ 0.94
CD40-206ENST00000489304 UBE2Q2LH0YL09 131 aa20.92■□□□□ 0.94
CD40-206ENST00000489304 H7C1D1 291 aa20.92■□□□□ 0.94
CD40-206ENST00000489304 CCDC82Q8N4S0 544 aa20.92■□□□□ 0.94
CD40-206ENST00000489304 STX8Q9UNK0 236 aa20.92■□□□□ 0.94
CD40-206ENST00000489304 CNTNAP5Q8WYK1 1306 aa20.91■□□□□ 0.94
CD40-206ENST00000489304 MPHOSPH10O00566 681 aaKnown RBP20.91■□□□□ 0.94
CD40-206ENST00000489304 TOP1P11387 765 aaKnown RBP20.91■□□□□ 0.94
CD40-206ENST00000489304 JAG1P78504 1218 aa20.91■□□□□ 0.94
CD40-206ENST00000489304 TATDN1Q6P1N9 297 aa20.91■□□□□ 0.94
CD40-206ENST00000489304 FAM83AQ86UY5 434 aa20.91■□□□□ 0.94
CD40-206ENST00000489304 SRBD1Q8N5C6 995 aaKnown RBP20.91■□□□□ 0.94
CD40-206ENST00000489304 CCDC17Q96LX7 622 aa20.91■□□□□ 0.94
CD40-206ENST00000489304 ZNF396Q96N95 335 aaPredicted RBP20.91■□□□□ 0.94
CD40-206ENST00000489304 TRIM34Q9BYJ4 488 aa20.91■□□□□ 0.94
CD40-206ENST00000489304 HACL1Q9UJ83 578 aa20.91■□□□□ 0.94
CD40-206ENST00000489304 MYH4Q9Y623 1939 aa20.9■□□□□ 0.94
CD40-206ENST00000489304 GNAQP50148 359 aa20.9■□□□□ 0.94
CD40-206ENST00000489304 HIRAP54198 1017 aaPredicted RBP20.9■□□□□ 0.94
CD40-206ENST00000489304 AKAP17AQ02040 695 aaKnown RBP20.9■□□□□ 0.94
CD40-206ENST00000489304 RASA3Q14644 834 aa20.9■□□□□ 0.94
CD40-206ENST00000489304 RASGRP2Q7LDG7 609 aa20.9■□□□□ 0.94
CD40-206ENST00000489304 LEO1Q8WVC0 666 aaPredicted RBP20.9■□□□□ 0.94
CD40-206ENST00000489304 SPATA32Q96LK8 384 aa20.9■□□□□ 0.94
CD40-206ENST00000489304 MTMR4Q9NYA4 1195 aa20.9■□□□□ 0.94
CD40-206ENST00000489304 MTMR7Q9Y216 660 aa20.9■□□□□ 0.94
CD40-206ENST00000489304 BAZ2BQ9UIF8 2168 aaKnown RBP20.9■□□□□ 0.94
CD40-206ENST00000489304 GDF11O95390 407 aa20.9■□□□□ 0.94
CD40-206ENST00000489304 PKN1Q16512 942 aa20.9■□□□□ 0.94
CD40-206ENST00000489304 CERKLQ49MI3 558 aaPredicted RBP20.9■□□□□ 0.94
CD40-206ENST00000489304 KIF28PB7ZC32 967 aa20.89■□□□□ 0.93
CD40-206ENST00000489304 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.89■□□□□ 0.93
CD40-206ENST00000489304 MAD2L2Q9UI95 211 aa20.89■□□□□ 0.93
CD40-206ENST00000489304 V9GY48 417 aaPredicted RBP20.89■□□□□ 0.93
CD40-206ENST00000489304 SOCS7O14512 581 aa20.88■□□□□ 0.93
CD40-206ENST00000489304 U2AF2P26368 475 aaKnown RBP eCLIP20.88■□□□□ 0.93
CD40-206ENST00000489304 CAVIN1Q6NZI2 390 aaKnown RBP20.88■□□□□ 0.93
CD40-206ENST00000489304 MIGA2Q7L4E1 593 aa20.88■□□□□ 0.93
CD40-206ENST00000489304 RBM27Q9P2N5 1060 aaKnown RBP20.88■□□□□ 0.93
CD40-206ENST00000489304 PALM3A6NDB9 673 aaPredicted RBP20.87■□□□□ 0.93
CD40-206ENST00000489304 MMP1P03956 469 aa20.87■□□□□ 0.93
CD40-206ENST00000489304 PPP4R3BQ5MIZ7 849 aa20.87■□□□□ 0.93
CD40-206ENST00000489304 TEPSINQ96N21 525 aa20.87■□□□□ 0.93
CD40-206ENST00000489304 CLIP2Q9UDT6 1046 aa20.87■□□□□ 0.93
CD40-206ENST00000489304 RCOR1Q9UKL0 485 aa20.87■□□□□ 0.93
CD40-206ENST00000489304 TNNI2P48788 182 aa20.87■□□□□ 0.93
CD40-206ENST00000489304 ANGEL2Q5VTE6 544 aaKnown RBP20.87■□□□□ 0.93
CD40-206ENST00000489304 MYSM1Q5VVJ2 828 aa20.87■□□□□ 0.93
CD40-206ENST00000489304 LRRC47Q8N1G4 583 aaKnown RBP20.87■□□□□ 0.93
CD40-206ENST00000489304 STAG2Q8N3U4 1231 aa20.87■□□□□ 0.93
CD40-206ENST00000489304 USP28Q96RU2 1077 aa20.87■□□□□ 0.93
CD40-206ENST00000489304 LZTS2Q9BRK4 669 aa20.87■□□□□ 0.93
CD40-206ENST00000489304 TTLL1O95922 423 aa20.86■□□□□ 0.93
CD40-206ENST00000489304 XBP1P17861 261 aa20.86■□□□□ 0.93
CD40-206ENST00000489304 SEPT2Q15019 361 aa20.86■□□□□ 0.93
CD40-206ENST00000489304 SAFBQ15424 915 aaKnown RBP eCLIP20.86■□□□□ 0.93
CD40-206ENST00000489304 RTEL1Q9NZ71 1219 aa20.86■□□□□ 0.93
CD40-206ENST00000489304 HERC5Q9UII4 1024 aaKnown RBP20.86■□□□□ 0.93
CD40-206ENST00000489304 hCG_1642624A0A1W2PR95 340 aa20.85■□□□□ 0.93
CD40-206ENST00000489304 ABCB5Q2M3G0 1257 aa20.85■□□□□ 0.93
CD40-206ENST00000489304 ATP2B2Q01814 1243 aa20.84■□□□□ 0.93
CD40-206ENST00000489304 SIAH1Q8IUQ4 282 aa20.84■□□□□ 0.93
CD40-206ENST00000489304 FOXP1Q9H334 677 aaPredicted RBP20.84■□□□□ 0.93
CD40-206ENST00000489304 TMEM63CQ9P1W3 806 aa20.84■□□□□ 0.93
CD40-206ENST00000489304 KCNJ14Q9UNX9 436 aa20.84■□□□□ 0.93
CD40-206ENST00000489304 GH2P01242 217 aa20.84■□□□□ 0.93
CD40-206ENST00000489304 PARP1P09874 1014 aaKnown RBP20.84■□□□□ 0.93
CD40-206ENST00000489304 GOLGA8HP0CJ92 632 aa20.84■□□□□ 0.93
CD40-206ENST00000489304 SCG2P13521 617 aa20.84■□□□□ 0.93
CD40-206ENST00000489304 SMARCA1P28370 1054 aa20.84■□□□□ 0.93
CD40-206ENST00000489304 GNL2Q13823 731 aaKnown RBP20.84■□□□□ 0.93
CD40-206ENST00000489304 PFKFB3Q16875 520 aaPredicted RBP20.84■□□□□ 0.93
CD40-206ENST00000489304 SLC35G1Q2M3R5 365 aa20.84■□□□□ 0.93
CD40-206ENST00000489304 PRAMEF18Q5VWM3 479 aa20.84■□□□□ 0.93
CD40-206ENST00000489304 DIS3L2Q8IYB7 885 aaKnown RBP20.84■□□□□ 0.93
CD40-206ENST00000489304 SYAP1Q96A49 352 aaPredicted RBP20.84■□□□□ 0.93
CD40-206ENST00000489304 SHISA4Q96DD7 197 aa20.84■□□□□ 0.93
CD40-206ENST00000489304 PHF20Q9BVI0 1012 aa20.84■□□□□ 0.93
CD40-206ENST00000489304 SPZ1Q9BXG8 430 aa20.84■□□□□ 0.93
CD40-206ENST00000489304 DEFB129Q9H1M3 183 aa20.84■□□□□ 0.93
CD40-206ENST00000489304 POLR3EQ9NVU0 708 aa20.84■□□□□ 0.93
CD40-206ENST00000489304 GGA3Q9NZ52 723 aa20.84■□□□□ 0.93
CD40-206ENST00000489304 USP17L5A8MUK1 530 aa20.83■□□□□ 0.92
CD40-206ENST00000489304 GRIN3BO60391 1043 aa20.83■□□□□ 0.92
CD40-206ENST00000489304 TNFAIP1Q13829 316 aa20.83■□□□□ 0.92
CD40-206ENST00000489304 ZSCAN23Q3MJ62 389 aa20.83■□□□□ 0.92
CD40-206ENST00000489304 FTOQ9C0B1 505 aaKnown RBP eCLIP20.83■□□□□ 0.92
CD40-206ENST00000489304 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.83■□□□□ 0.92
CD40-206ENST00000489304 UTRNP46939 3433 aa20.82■□□□□ 0.92
CD40-206ENST00000489304 KLRF2D3W0D1 207 aa20.82■□□□□ 0.92
CD40-206ENST00000489304 TBC1D12O60347 775 aa20.82■□□□□ 0.92
CD40-206ENST00000489304 YEATS4O95619 227 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms