RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 UBXN2AP68543 259 aa28.56■■■□□ 2.16
PTPN18-213ENST00000489215 ATP2B2Q01814 1243 aa28.56■■■□□ 2.16
PTPN18-213ENST00000489215 PPP4R3BQ5MIZ7 849 aa28.56■■■□□ 2.16
PTPN18-213ENST00000489215 NYAP2Q9P242 653 aa28.56■■■□□ 2.16
PTPN18-213ENST00000489215 WDR46O15213 610 aaKnown RBP28.55■■■□□ 2.16
PTPN18-213ENST00000489215 CCDC129Q6ZRS4 1044 aa28.55■■■□□ 2.16
PTPN18-213ENST00000489215 STK11IPQ8N1F8 1099 aa28.55■■■□□ 2.16
PTPN18-213ENST00000489215 FAM227BQ96M60 508 aa28.55■■■□□ 2.16
PTPN18-213ENST00000489215 TANGO6Q9C0B7 1094 aa28.55■■■□□ 2.16
PTPN18-213ENST00000489215 GABRQQ9UN88 632 aa28.55■■■□□ 2.16
PTPN18-213ENST00000489215 NMIQ13287 307 aaPredicted RBP28.54■■■□□ 2.16
PTPN18-213ENST00000489215 SH3TC2Q8TF17 1288 aa28.54■■■□□ 2.16
PTPN18-213ENST00000489215 PAGR1Q9BTK6 254 aa28.54■■■□□ 2.16
PTPN18-213ENST00000489215 TXNRD2Q9NNW7 524 aa28.54■■■□□ 2.16
PTPN18-213ENST00000489215 BIN2Q9UBW5 565 aaPredicted RBP28.54■■■□□ 2.16
PTPN18-213ENST00000489215 SYNPO2Q9UMS6 1093 aa28.54■■■□□ 2.16
PTPN18-213ENST00000489215 RBBP6Q7Z6E9 1792 aaKnown RBP28.53■■■□□ 2.16
PTPN18-213ENST00000489215 A0A0D9SFI3 127 aa28.53■■■□□ 2.16
PTPN18-213ENST00000489215 ADCY3O60266 1144 aa28.53■■■□□ 2.16
PTPN18-213ENST00000489215 MB21D1Q8N884 522 aa28.53■■■□□ 2.16
PTPN18-213ENST00000489215 DIAPH3Q9NSV4 1193 aa28.53■■■□□ 2.16
PTPN18-213ENST00000489215 ANAPC4Q9UJX5 808 aa28.53■■■□□ 2.16
PTPN18-213ENST00000489215 GREB1LQ9C091 1923 aaPredicted RBP28.53■■■□□ 2.16
PTPN18-213ENST00000489215 ZMYM6O95789 1325 aa28.52■■■□□ 2.16
PTPN18-213ENST00000489215 CCDC171Q6TFL3 1326 aa28.52■■■□□ 2.16
PTPN18-213ENST00000489215 TSPY3P0CV98 308 aa28.52■■■□□ 2.16
PTPN18-213ENST00000489215 TSPY8P0CW00 308 aa28.52■■■□□ 2.16
PTPN18-213ENST00000489215 SOCS4Q8WXH5 440 aa28.52■■■□□ 2.16
PTPN18-213ENST00000489215 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.52■■■□□ 2.16
PTPN18-213ENST00000489215 CWC22Q9HCG8 908 aaKnown RBP28.52■■■□□ 2.16
PTPN18-213ENST00000489215 DOCK3Q8IZD9 2030 aa28.52■■■□□ 2.16
PTPN18-213ENST00000489215 SPDYE16A6NNV3 312 aaPredicted RBP28.51■■■□□ 2.15
PTPN18-213ENST00000489215 Q3C1V9 767 aa28.51■■■□□ 2.15
PTPN18-213ENST00000489215 CLEC10AQ8IUN9 316 aa28.51■■■□□ 2.15
PTPN18-213ENST00000489215 NEDD1Q8NHV4 660 aa28.51■■■□□ 2.15
PTPN18-213ENST00000489215 NUDT12Q9BQG2 462 aa28.51■■■□□ 2.15
PTPN18-213ENST00000489215 PRDM1O75626 825 aa28.5■■■□□ 2.15
PTPN18-213ENST00000489215 HSPD1P10809 573 aaKnown RBP28.5■■■□□ 2.15
PTPN18-213ENST00000489215 CAPN2P17655 700 aa28.5■■■□□ 2.15
PTPN18-213ENST00000489215 VPS53Q5VIR6 699 aa28.5■■■□□ 2.15
PTPN18-213ENST00000489215 MKL1Q969V6 931 aa28.5■■■□□ 2.15
PTPN18-213ENST00000489215 FOXP2O15409 715 aa28.49■■■□□ 2.15
PTPN18-213ENST00000489215 FLOT1O75955 427 aa28.49■■■□□ 2.15
PTPN18-213ENST00000489215 TTLL1O95922 423 aa28.49■■■□□ 2.15
PTPN18-213ENST00000489215 FGAP02671 866 aa28.49■■■□□ 2.15
PTPN18-213ENST00000489215 TRMT44Q8IYL2 757 aaKnown RBP28.49■■■□□ 2.15
PTPN18-213ENST00000489215 SPICE1Q8N0Z3 855 aa28.49■■■□□ 2.15
PTPN18-213ENST00000489215 NKX2-3Q8TAU0 364 aa28.49■■■□□ 2.15
PTPN18-213ENST00000489215 MTMR4Q9NYA4 1195 aa28.49■■■□□ 2.15
PTPN18-213ENST00000489215 GJD2Q9UKL4 321 aa28.49■■■□□ 2.15
PTPN18-213ENST00000489215 PLIN4Q96Q06 1357 aa28.49■■■□□ 2.15
PTPN18-213ENST00000489215 IGKV6D-41A0A0C4DH26 115 aa28.48■■■□□ 2.15
PTPN18-213ENST00000489215 PCP11498 1178 aaKnown RBP28.48■■■□□ 2.15
PTPN18-213ENST00000489215 DSG3P32926 999 aa28.48■■■□□ 2.15
PTPN18-213ENST00000489215 TFAP4Q01664 338 aa28.48■■■□□ 2.15
PTPN18-213ENST00000489215 PLEKHH3Q7Z736 793 aa28.48■■■□□ 2.15
PTPN18-213ENST00000489215 CLIP2Q9UDT6 1046 aa28.48■■■□□ 2.15
PTPN18-213ENST00000489215 HTTP42858 3142 aa28.47■■■□□ 2.15
PTPN18-213ENST00000489215 RAD21O60216 631 aa28.47■■■□□ 2.15
PTPN18-213ENST00000489215 XRCC5P13010 732 aaKnown RBP28.47■■■□□ 2.15
PTPN18-213ENST00000489215 KIAA1755Q5JYT7 1200 aa28.47■■■□□ 2.15
PTPN18-213ENST00000489215 TTC22Q5TAA0 569 aa28.47■■■□□ 2.15
PTPN18-213ENST00000489215 CWC27Q6UX04 472 aaKnown RBP28.47■■■□□ 2.15
PTPN18-213ENST00000489215 GPR142Q7Z601 462 aa28.47■■■□□ 2.15
PTPN18-213ENST00000489215 KIAA0100Q14667 2235 aaKnown RBP28.46■■■□□ 2.15
PTPN18-213ENST00000489215 POTEFA5A3E0 1075 aa28.46■■■□□ 2.15
PTPN18-213ENST00000489215 TSPY2A6NKD2 308 aa28.46■■■□□ 2.15
PTPN18-213ENST00000489215 CNMDO75829 334 aa28.46■■■□□ 2.15
PTPN18-213ENST00000489215 PDE4AP27815 886 aa28.46■■■□□ 2.15
PTPN18-213ENST00000489215 NT5C2P49902 561 aa28.46■■■□□ 2.15
PTPN18-213ENST00000489215 POTEEQ6S8J3 1075 aa28.46■■■□□ 2.15
PTPN18-213ENST00000489215 ZNF589Q86UQ0 364 aaPredicted RBP28.46■■■□□ 2.15
PTPN18-213ENST00000489215 CEP95Q96GE4 821 aa28.46■■■□□ 2.15
PTPN18-213ENST00000489215 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.46■■■□□ 2.15
PTPN18-213ENST00000489215 IVNS1ABPQ9Y6Y0 642 aa28.46■■■□□ 2.15
PTPN18-213ENST00000489215 MYH4Q9Y623 1939 aa28.45■■■□□ 2.15
PTPN18-213ENST00000489215 F5H6K3 240 aa28.45■■■□□ 2.14
PTPN18-213ENST00000489215 ORC4O43929 436 aa28.45■■■□□ 2.14
PTPN18-213ENST00000489215 FGRP09769 529 aa28.45■■■□□ 2.14
PTPN18-213ENST00000489215 CTDSPL2Q05D32 466 aa28.45■■■□□ 2.14
PTPN18-213ENST00000489215 KLRC3Q07444 240 aa28.45■■■□□ 2.14
PTPN18-213ENST00000489215 PORCNQ9H237 461 aa28.45■■■□□ 2.14
PTPN18-213ENST00000489215 BTBD7Q9P203 1132 aa28.45■■■□□ 2.14
PTPN18-213ENST00000489215 STRNO43815 780 aa28.44■■■□□ 2.14
PTPN18-213ENST00000489215 RGS2P41220 211 aa28.44■■■□□ 2.14
PTPN18-213ENST00000489215 SHCBP1Q8NEM2 672 aa28.44■■■□□ 2.14
PTPN18-213ENST00000489215 HMGCRP04035 888 aa28.43■■■□□ 2.14
PTPN18-213ENST00000489215 CCL5P13501 91 aa28.43■■■□□ 2.14
PTPN18-213ENST00000489215 ELNP15502 786 aa28.43■■■□□ 2.14
PTPN18-213ENST00000489215 FAM47AQ5JRC9 791 aa28.43■■■□□ 2.14
PTPN18-213ENST00000489215 GMCL1P1Q8NEA9 526 aa28.43■■■□□ 2.14
PTPN18-213ENST00000489215 RUFY2Q8WXA3 655 aa28.43■■■□□ 2.14
PTPN18-213ENST00000489215 SPATC1LQ9H0A9 340 aa28.43■■■□□ 2.14
PTPN18-213ENST00000489215 RNF208Q9H0X6 261 aa28.43■■■□□ 2.14
PTPN18-213ENST00000489215 RNF41Q9H4P4 317 aaPredicted RBP28.43■■■□□ 2.14
PTPN18-213ENST00000489215 ADAMTS5Q9UNA0 930 aa28.43■■■□□ 2.14
PTPN18-213ENST00000489215 RLFQ13129 1914 aa28.43■■■□□ 2.14
PTPN18-213ENST00000489215 SLC15A5A6NIM6 579 aa28.42■■■□□ 2.14
PTPN18-213ENST00000489215 RANBP6O60518 1105 aaKnown RBP28.42■■■□□ 2.14
PTPN18-213ENST00000489215 PEX10O60683 326 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms