RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 ADKP55263 362 aaKnown RBP8.69□□□□□ -1.02
BEST3-205ENST00000488961 FMR1Q06787 632 aaKnown RBP eCLIP8.69□□□□□ -1.02
BEST3-205ENST00000488961 GPS2Q13227 327 aa8.69□□□□□ -1.02
BEST3-205ENST00000488961 REXO1L1PQ8IX06 675 aa8.69□□□□□ -1.02
BEST3-205ENST00000488961 ARHGEF1Q92888 912 aaKnown RBP8.69□□□□□ -1.02
BEST3-205ENST00000488961 EIF3CQ99613 913 aaKnown RBP8.69□□□□□ -1.02
BEST3-205ENST00000488961 STX8Q9UNK0 236 aa8.69□□□□□ -1.02
BEST3-205ENST00000488961 SLC39A14Q15043 492 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 PTPAQ15257 358 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 CAVIN4Q5BKX8 364 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 ARMCX5Q6P1M9 558 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 CPLX2Q6PUV4 134 aaKnown RBP8.68□□□□□ -1.02
BEST3-205ENST00000488961 RBM43Q6ZSC3 357 aaKnown RBP8.68□□□□□ -1.02
BEST3-205ENST00000488961 FAM196AQ6ZSG2 479 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 PIK3AP1Q6ZUJ8 805 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 MAP3K14Q99558 947 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 DESI2Q9BSY9 194 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 SAMSN1Q9NSI8 373 aaKnown RBP8.68□□□□□ -1.02
BEST3-205ENST00000488961 SLU7O95391 586 aaKnown RBP8.68□□□□□ -1.02
BEST3-205ENST00000488961 TFRCP02786 760 aaKnown RBP8.68□□□□□ -1.02
BEST3-205ENST00000488961 RPS8P62241 208 aaKnown RBP8.68□□□□□ -1.02
BEST3-205ENST00000488961 AKAP17AQ02040 695 aaKnown RBP8.68□□□□□ -1.02
BEST3-205ENST00000488961 PICALMQ13492 652 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 MAP9Q49MG5 647 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 TTC19Q6DKK2 380 aaPredicted RBP8.68□□□□□ -1.02
BEST3-205ENST00000488961 NOSTRINQ8IVI9 506 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 KCNG4Q8TDN1 519 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.68□□□□□ -1.02
BEST3-205ENST00000488961 TGFBRAP1Q8WUH2 860 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 GJA10Q969M2 543 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 BORCS6Q96GS4 357 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 DISP2A7MBM2 1401 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 RFX7Q2KHR2 1363 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 ECM29Q5VYK3 1845 aa8.68□□□□□ -1.02
BEST3-205ENST00000488961 TSPY2A6NKD2 308 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 TRIM22Q8IYM9 498 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 CRACR2BQ8N4Y2 399 aaPredicted RBP8.67□□□□□ -1.02
BEST3-205ENST00000488961 PRPF38AQ8NAV1 312 aaKnown RBP8.67□□□□□ -1.02
BEST3-205ENST00000488961 SH3RF3Q8TEJ3 882 aaPredicted RBP8.67□□□□□ -1.02
BEST3-205ENST00000488961 CCDC34Q96HJ3 373 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 CDC5LQ99459 802 aaKnown RBP8.67□□□□□ -1.02
BEST3-205ENST00000488961 ZSWIM4Q9H7M6 989 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 POLR3EQ9NVU0 708 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 BRCA2P51587 3418 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 SPATA31A5Q5VU36 1347 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 SPATA31A7Q8IWB4 1347 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 PES1O00541 588 aaKnown RBP8.67□□□□□ -1.02
BEST3-205ENST00000488961 PPP1R12AO14974 1030 aaPredicted RBP8.67□□□□□ -1.02
BEST3-205ENST00000488961 C4AP0C0L4 1744 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 C4BP0C0L5 1744 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 FANCCQ00597 558 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 SWT1Q5T5J6 900 aaKnown RBP8.67□□□□□ -1.02
BEST3-205ENST00000488961 DZIP1Q86YF9 867 aaKnown RBP8.67□□□□□ -1.02
BEST3-205ENST00000488961 SUGP1Q8IWZ8 645 aaKnown RBP8.67□□□□□ -1.02
BEST3-205ENST00000488961 SRBD1Q8N5C6 995 aaKnown RBP8.67□□□□□ -1.02
BEST3-205ENST00000488961 NLRP3Q96P20 1036 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 RIOK1Q9BRS2 568 aaKnown RBP8.67□□□□□ -1.02
BEST3-205ENST00000488961 LTBP4Q8N2S1 1624 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 FAM196BA6NMK8 535 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 MMP1P03956 469 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 USP5P45974 858 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 PLCD1P51178 756 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 ATP2B2Q01814 1243 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 MTF1Q14872 753 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 NCAPHQ15003 741 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 ARHGAP29Q52LW3 1261 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 MSL1Q68DK7 614 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 MMS22LQ6ZRQ5 1243 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 PIAS4Q8N2W9 510 aaPredicted RBP8.67□□□□□ -1.02
BEST3-205ENST00000488961 IRX2Q9BZI1 471 aaPredicted RBP8.67□□□□□ -1.02
BEST3-205ENST00000488961 HSD3B7Q9H2F3 369 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 SLC24A3Q9HC58 644 aa8.67□□□□□ -1.02
BEST3-205ENST00000488961 COL16A1Q07092 1604 aaPredicted RBP8.66□□□□□ -1.02
BEST3-205ENST00000488961 FMNL1O95466 1100 aaPredicted RBP8.66□□□□□ -1.02
BEST3-205ENST00000488961 TAL1P17542 331 aaPredicted RBP8.66□□□□□ -1.02
BEST3-205ENST00000488961 HIBADHP31937 336 aaKnown RBP8.66□□□□□ -1.02
BEST3-205ENST00000488961 RFC4P35249 363 aa8.66□□□□□ -1.02
BEST3-205ENST00000488961 CACNB3P54284 484 aa8.66□□□□□ -1.02
BEST3-205ENST00000488961 UBASH3AP57075 661 aa8.66□□□□□ -1.02
BEST3-205ENST00000488961 CCZ1BP86790 482 aa8.66□□□□□ -1.02
BEST3-205ENST00000488961 CCZ1P86791 482 aaPredicted RBP8.66□□□□□ -1.02
BEST3-205ENST00000488961 SAFBQ15424 915 aaKnown RBP eCLIP8.66□□□□□ -1.02
BEST3-205ENST00000488961 PTPN14Q15678 1187 aa8.66□□□□□ -1.02
BEST3-205ENST00000488961 KCTD19Q17RG1 926 aaPredicted RBP8.66□□□□□ -1.02
BEST3-205ENST00000488961 SHROOM1Q2M3G4 852 aaPredicted RBP8.66□□□□□ -1.02
BEST3-205ENST00000488961 MEX3CQ5U5Q3 659 aaKnown RBP8.66□□□□□ -1.02
BEST3-205ENST00000488961 NSUN4Q96CB9 384 aaKnown RBP8.66□□□□□ -1.02
BEST3-205ENST00000488961 ZSCAN10Q96SZ4 725 aaPredicted RBP8.66□□□□□ -1.02
BEST3-205ENST00000488961 LRRC4BQ9NT99 713 aa8.66□□□□□ -1.02
BEST3-205ENST00000488961 USP21Q9UK80 565 aa8.66□□□□□ -1.02
BEST3-205ENST00000488961 CICQ96RK0 1608 aaPredicted RBP8.66□□□□□ -1.02
BEST3-205ENST00000488961 CMA1P23946 247 aa8.66□□□□□ -1.02
BEST3-205ENST00000488961 CCT6AP40227 531 aaKnown RBP8.66□□□□□ -1.02
BEST3-205ENST00000488961 EVCP57679 992 aa8.66□□□□□ -1.02
BEST3-205ENST00000488961 TFAP4Q01664 338 aa8.66□□□□□ -1.02
BEST3-205ENST00000488961 KARSQ15046 597 aaKnown RBP8.66□□□□□ -1.02
BEST3-205ENST00000488961 TMCO3Q6UWJ1 677 aa8.66□□□□□ -1.02
BEST3-205ENST00000488961 TMEM87BQ96K49 555 aa8.66□□□□□ -1.02
BEST3-205ENST00000488961 SCAF8Q9UPN6 1271 aaKnown RBP8.66□□□□□ -1.02
BEST3-205ENST00000488961 PCDHAC2Q9Y5I4 1007 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms