RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 ST5P78524 1137 aa6.59□□□□□ -1.35
SF3A3-207ENST00000488934 DNM1Q05193 864 aaKnown RBP6.59□□□□□ -1.35
SF3A3-207ENST00000488934 NFIXQ14938 502 aa6.59□□□□□ -1.35
SF3A3-207ENST00000488934 FAM26DQ5JW98 314 aa6.59□□□□□ -1.35
SF3A3-207ENST00000488934 EDEM1Q92611 657 aa6.59□□□□□ -1.35
SF3A3-207ENST00000488934 SRA1Q9HD15 236 aaKnown RBP6.59□□□□□ -1.35
SF3A3-207ENST00000488934 ATP10DQ9P241 1426 aa6.59□□□□□ -1.36
SF3A3-207ENST00000488934 IL16Q14005 1332 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 MAP3K15Q6ZN16 1313 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 PRAMEF22A3QJZ6 481 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 SMNDC1O75940 238 aaKnown RBP eCLIP6.58□□□□□ -1.36
SF3A3-207ENST00000488934 CAMTA2O94983 1202 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 ABL1P00519 1130 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 MPSTP25325 297 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 PDE6BP35913 854 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 EIF1AXP47813 144 aaKnown RBP6.58□□□□□ -1.36
SF3A3-207ENST00000488934 FKBP4Q02790 459 aaKnown RBP eCLIP6.58□□□□□ -1.36
SF3A3-207ENST00000488934 DDR1Q08345 913 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 EHHADHQ08426 723 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 MAP4K3Q8IVH8 894 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 FMR1NBQ8N0W7 255 aaPredicted RBP6.58□□□□□ -1.36
SF3A3-207ENST00000488934 CNBD1Q8NA66 436 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 PMEPA1Q969W9 287 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 NYXQ9GZU5 481 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 MUC3BQ9H195 1237 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 ELP3Q9H9T3 547 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 PIM2Q9P1W9 311 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 ARFGEF2Q9Y6D5 1785 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 ANKRD31Q8N7Z5 1873 aa6.58□□□□□ -1.36
SF3A3-207ENST00000488934 IBTKQ9P2D0 1353 aaPredicted RBP6.57□□□□□ -1.36
SF3A3-207ENST00000488934 H0YIN7 160 aa6.57□□□□□ -1.36
SF3A3-207ENST00000488934 J3QW42 95 aa6.57□□□□□ -1.36
SF3A3-207ENST00000488934 PDGFAP04085 211 aa6.57□□□□□ -1.36
SF3A3-207ENST00000488934 MYL6BP14649 208 aa6.57□□□□□ -1.36
SF3A3-207ENST00000488934 EIF2S2P20042 333 aaKnown RBP6.57□□□□□ -1.36
SF3A3-207ENST00000488934 C8orf34Q49A92 452 aa6.57□□□□□ -1.36
SF3A3-207ENST00000488934 HSP90AB3PQ58FF7 597 aa6.57□□□□□ -1.36
SF3A3-207ENST00000488934 TBC1D9BQ66K14 1250 aa6.57□□□□□ -1.36
SF3A3-207ENST00000488934 XKR5Q6UX68 686 aa6.57□□□□□ -1.36
SF3A3-207ENST00000488934 TPTE2Q6XPS3 522 aa6.57□□□□□ -1.36
SF3A3-207ENST00000488934 ATCAYQ86WG3 371 aa6.57□□□□□ -1.36
SF3A3-207ENST00000488934 NBPF5PQ86XG9 351 aaPredicted RBP6.57□□□□□ -1.36
SF3A3-207ENST00000488934 BRIP1Q9BX63 1249 aa6.57□□□□□ -1.36
SF3A3-207ENST00000488934 DDX21Q9NR30 783 aaKnown RBP eCLIP6.57□□□□□ -1.36
SF3A3-207ENST00000488934 HYPKQ9NX55 129 aa6.57□□□□□ -1.36
SF3A3-207ENST00000488934 DBF4Q9UBU7 674 aaPredicted RBP6.57□□□□□ -1.36
SF3A3-207ENST00000488934 EGFL7Q9UHF1 273 aa6.57□□□□□ -1.36
SF3A3-207ENST00000488934 NIP7Q9Y221 180 aaKnown RBP eCLIP6.57□□□□□ -1.36
SF3A3-207ENST00000488934 CACNA1SQ13698 1873 aa6.57□□□□□ -1.36
SF3A3-207ENST00000488934 RNF123Q5XPI4 1314 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 A0A0G2JLW4 131 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 CCER2I3L3R5 266 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 ZNF853P0CG23 659 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 DPEP1P16444 411 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 YBX3P16989 372 aaKnown RBP eCLIP6.56□□□□□ -1.36
SF3A3-207ENST00000488934 NPR3P17342 541 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 PIP4K2AP48426 406 aaPredicted RBP6.56□□□□□ -1.36
SF3A3-207ENST00000488934 GRIK4Q16099 956 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 CCDC184Q52MB2 194 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 PARP10Q53GL7 1025 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 DALRD3Q5D0E6 543 aaKnown RBP6.56□□□□□ -1.36
SF3A3-207ENST00000488934 SOGA3Q5TF21 947 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 GDF6Q6KF10 455 aaPredicted RBP6.56□□□□□ -1.36
SF3A3-207ENST00000488934 PRR5LQ6MZQ0 368 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 PPP1R42Q7Z4L9 355 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 NCAPG2Q86XI2 1143 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 FBXO11Q86XK2 927 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 WDR63Q8IWG1 891 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 FAM9BQ8IZU0 186 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 LENG1Q96BZ8 264 aaPredicted RBP6.56□□□□□ -1.36
SF3A3-207ENST00000488934 RIC1Q4ADV7 1423 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 COL11A2P13942 1736 aaPredicted RBP6.56□□□□□ -1.36
SF3A3-207ENST00000488934 UTRNP46939 3433 aa6.56□□□□□ -1.36
SF3A3-207ENST00000488934 K7ELQ4 463 aaPredicted RBP6.55□□□□□ -1.36
SF3A3-207ENST00000488934 DDX58O95786 925 aaKnown RBP6.55□□□□□ -1.36
SF3A3-207ENST00000488934 GRIK5Q16478 980 aa6.55□□□□□ -1.36
SF3A3-207ENST00000488934 CCDC30Q5VVM6 783 aa6.55□□□□□ -1.36
SF3A3-207ENST00000488934 DUSP27Q5VZP5 1158 aa6.55□□□□□ -1.36
SF3A3-207ENST00000488934 C2CD5Q86YS7 1000 aa6.55□□□□□ -1.36
SF3A3-207ENST00000488934 IL22RA1Q8N6P7 574 aa6.55□□□□□ -1.36
SF3A3-207ENST00000488934 STK31Q9BXU1 1019 aa6.55□□□□□ -1.36
SF3A3-207ENST00000488934 MYH16Q9H6N6 1097 aa6.55□□□□□ -1.36
SF3A3-207ENST00000488934 CHPF2Q9P2E5 772 aa6.55□□□□□ -1.36
SF3A3-207ENST00000488934 SBF1O95248 1867 aa6.54□□□□□ -1.36
SF3A3-207ENST00000488934 GOLGB1Q14789 3259 aaKnown RBP6.54□□□□□ -1.36
SF3A3-207ENST00000488934 KIF4AO95239 1232 aa6.54□□□□□ -1.36
SF3A3-207ENST00000488934 HSP90B1P14625 803 aaKnown RBP6.54□□□□□ -1.36
SF3A3-207ENST00000488934 CES1P23141 567 aa6.54□□□□□ -1.36
SF3A3-207ENST00000488934 MTMR3Q13615 1198 aa6.54□□□□□ -1.36
SF3A3-207ENST00000488934 CEP135Q66GS9 1140 aa6.54□□□□□ -1.36
SF3A3-207ENST00000488934 STYK1Q6J9G0 422 aa6.54□□□□□ -1.36
SF3A3-207ENST00000488934 PHLDB3Q6NSJ2 640 aa6.54□□□□□ -1.36
SF3A3-207ENST00000488934 FAM117BQ6P1L5 589 aa6.54□□□□□ -1.36
SF3A3-207ENST00000488934 GLYCTKQ8IVS8 523 aa6.54□□□□□ -1.36
SF3A3-207ENST00000488934 TTLL6Q8N841 843 aa6.54□□□□□ -1.36
SF3A3-207ENST00000488934 MASTLQ96GX5 879 aa6.54□□□□□ -1.36
SF3A3-207ENST00000488934 LAMB2P55268 1798 aa6.54□□□□□ -1.36
SF3A3-207ENST00000488934 FER1L6Q2WGJ9 1857 aa6.53□□□□□ -1.36
SF3A3-207ENST00000488934 DICER1Q9UPY3 1922 aaKnown RBP6.53□□□□□ -1.36
SF3A3-207ENST00000488934 ADAM23O75077 832 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms