RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 SALL1Q9NSC2 1324 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 LGR5O75473 907 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 TATP17735 454 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-229ENST00000488765 TTC39AQ5SRH9 613 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 AP1ARQ63HQ0 302 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 CCDC121Q6ZUS5 278 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 COPS6Q7L5N1 327 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 TTC5Q8N0Z6 440 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 KAZALD1Q96I82 304 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 SH3GL2Q99962 352 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 PLCD4Q9BRC7 762 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 TACO1Q9BSH4 297 aaKnown RBP18.15■□□□□ 0.5
MCF2L-229ENST00000488765 WWC3Q9ULE0 1092 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 EXOSC10Q01780 885 aaKnown RBP18.14■□□□□ 0.49
MCF2L-229ENST00000488765 TOM1L2Q6ZVM7 507 aa18.14■□□□□ 0.49
MCF2L-229ENST00000488765 KIAA1328Q86T90 577 aa18.14■□□□□ 0.49
MCF2L-229ENST00000488765 MSL3Q8N5Y2 521 aaKnown RBP18.14■□□□□ 0.49
MCF2L-229ENST00000488765 CNKSR2Q8WXI2 1034 aa18.14■□□□□ 0.49
MCF2L-229ENST00000488765 STAMBPL1Q96FJ0 436 aa18.14■□□□□ 0.49
MCF2L-229ENST00000488765 SNRKQ9NRH2 765 aa18.14■□□□□ 0.49
MCF2L-229ENST00000488765 IDEP14735 1019 aa18.14■□□□□ 0.49
MCF2L-229ENST00000488765 PROCA1Q8NCQ7 364 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-229ENST00000488765 ZIM3Q96PE6 472 aa18.14■□□□□ 0.49
MCF2L-229ENST00000488765 VCPKMTQ9H867 229 aa18.14■□□□□ 0.49
MCF2L-229ENST00000488765 REXO2Q9Y3B8 237 aaKnown RBP18.14■□□□□ 0.49
MCF2L-229ENST00000488765 SLIT1O75093 1534 aa18.14■□□□□ 0.49
MCF2L-229ENST00000488765 TMEM94Q12767 1356 aa18.14■□□□□ 0.49
MCF2L-229ENST00000488765 A0A1B0GTH6 734 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 RASSF9O75901 435 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 SMTNP53814 917 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 EPHA10Q5JZY3 1008 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 TRAPPC11Q7Z392 1133 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 MICU3Q86XE3 530 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 FUKQ8N0W3 1084 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 SPDYE1Q8NFV5 336 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-229ENST00000488765 ZNF496Q96IT1 587 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-229ENST00000488765 MYD88Q99836 296 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 LACRTQ9GZZ8 138 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 PRDM11Q9NQV5 511 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 EPN1Q9Y6I3 576 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-229ENST00000488765 AKAP12Q02952 1782 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 CRYMQ14894 314 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 CCDC181Q5TID7 509 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 PNMA8AQ86V59 439 aaPredicted RBP18.13■□□□□ 0.49
MCF2L-229ENST00000488765 CMTR1Q8N1G2 835 aaKnown RBP18.13■□□□□ 0.49
MCF2L-229ENST00000488765 ARMC2Q8NEN0 867 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 XAGE3Q8WTP9 111 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 ABHD10Q9NUJ1 306 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 HPSEQ9Y251 543 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 RTN2O75298 545 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 CALRP27797 417 aaKnown RBP18.13■□□□□ 0.49
MCF2L-229ENST00000488765 AMOTQ4VCS5 1084 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 TCP11Q8WWU5 503 aa18.13■□□□□ 0.49
MCF2L-229ENST00000488765 CCDC43Q96MW1 224 aaKnown RBP18.13■□□□□ 0.49
MCF2L-229ENST00000488765 RCCD1A6NED2 376 aa18.12■□□□□ 0.49
MCF2L-229ENST00000488765 HSF2BPO75031 334 aa18.12■□□□□ 0.49
MCF2L-229ENST00000488765 TMOD1P28289 359 aa18.12■□□□□ 0.49
MCF2L-229ENST00000488765 PSMD2Q13200 908 aa18.12■□□□□ 0.49
MCF2L-229ENST00000488765 KRT40Q6A162 431 aa18.12■□□□□ 0.49
MCF2L-229ENST00000488765 FAM153BP0C7A2 387 aa18.12■□□□□ 0.49
MCF2L-229ENST00000488765 TIMM10P62072 90 aa18.12■□□□□ 0.49
MCF2L-229ENST00000488765 TRADDQ15628 312 aa18.12■□□□□ 0.49
MCF2L-229ENST00000488765 FAM153CQ494X1 144 aa18.12■□□□□ 0.49
MCF2L-229ENST00000488765 NLRP14Q86W24 1093 aa18.12■□□□□ 0.49
MCF2L-229ENST00000488765 ENOX1Q8TC92 643 aaKnown RBP18.12■□□□□ 0.49
MCF2L-229ENST00000488765 NSMCE1Q8WV22 266 aa18.12■□□□□ 0.49
MCF2L-229ENST00000488765 FAM167BQ9BTA0 163 aa18.12■□□□□ 0.49
MCF2L-229ENST00000488765 A1CFQ9NQ94 594 aaKnown RBP18.12■□□□□ 0.49
MCF2L-229ENST00000488765 FAM153AQ9UHL3 310 aa18.12■□□□□ 0.49
MCF2L-229ENST00000488765 FAM184BQ9ULE4 1060 aa18.12■□□□□ 0.49
MCF2L-229ENST00000488765 PRC1O43663 620 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 CLTAP09496 248 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 HSPD1P10809 573 aaKnown RBP18.11■□□□□ 0.49
MCF2L-229ENST00000488765 GRIPAP1Q4V328 841 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 ANKRD13CQ8N6S4 541 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 NLRP3Q96P20 1036 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 SPATS2LQ9NUQ6 558 aaKnown RBP18.11■□□□□ 0.49
MCF2L-229ENST00000488765 RESP18Q5W5W9 173 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 NKX2-3Q8TAU0 364 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 ADD3Q9UEY8 706 aaKnown RBP18.11■□□□□ 0.49
MCF2L-229ENST00000488765 KCNJ14Q9UNX9 436 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 PIK3C2AO00443 1686 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 BUB1BO60566 1050 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-229ENST00000488765 NDUFA10O95299 355 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 FILIP1LQ4L180 1135 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 HIBCHQ6NVY1 386 aaPredicted RBP18.11■□□□□ 0.49
MCF2L-229ENST00000488765 CEP120Q8N960 986 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 OR2W6PQ8NHA6 318 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 MYCBPAPQ8TBZ2 947 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 LMBR1Q8WVP7 490 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 BLZF1Q9H2G9 400 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 SENP2Q9HC62 589 aa18.11■□□□□ 0.49
MCF2L-229ENST00000488765 CABP4P57796 275 aa18.1■□□□□ 0.49
MCF2L-229ENST00000488765 QPCTQ16769 361 aa18.1■□□□□ 0.49
MCF2L-229ENST00000488765 ZNF790Q6PG37 636 aa18.1■□□□□ 0.49
MCF2L-229ENST00000488765 MAATS1Q7Z4T9 603 aa18.1■□□□□ 0.49
MCF2L-229ENST00000488765 BRAPQ7Z569 592 aa18.1■□□□□ 0.49
MCF2L-229ENST00000488765 OSBPL7Q9BZF2 842 aa18.1■□□□□ 0.49
MCF2L-229ENST00000488765 CTNND2Q9UQB3 1225 aa18.1■□□□□ 0.49
MCF2L-229ENST00000488765 PTPAQ15257 358 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 278.9 ms