RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 KIAA1755Q5JYT7 1200 aa28.28■■■□□ 2.12
RNF38-208ENST00000488058 ZNF287Q9HBT7 754 aa28.28■■■□□ 2.12
RNF38-208ENST00000488058 CWC22Q9HCG8 908 aaKnown RBP28.28■■■□□ 2.12
RNF38-208ENST00000488058 A0A0D9SFI3 127 aa28.27■■■□□ 2.12
RNF38-208ENST00000488058 EN2P19622 333 aaPredicted RBP28.27■■■□□ 2.12
RNF38-208ENST00000488058 UBXN2AP68543 259 aa28.27■■■□□ 2.12
RNF38-208ENST00000488058 PPARAQ07869 468 aa28.27■■■□□ 2.12
RNF38-208ENST00000488058 NMIQ13287 307 aaPredicted RBP28.27■■■□□ 2.12
RNF38-208ENST00000488058 MTFR1Q15390 333 aa28.27■■■□□ 2.12
RNF38-208ENST00000488058 ZNF444Q8N0Y2 327 aaPredicted RBP28.27■■■□□ 2.12
RNF38-208ENST00000488058 OSBPL3Q9H4L5 887 aa28.27■■■□□ 2.12
RNF38-208ENST00000488058 VCPKMTQ9H867 229 aa28.27■■■□□ 2.12
RNF38-208ENST00000488058 GREB1LQ9C091 1923 aaPredicted RBP28.27■■■□□ 2.12
RNF38-208ENST00000488058 SPDYE16A6NNV3 312 aaPredicted RBP28.26■■■□□ 2.11
RNF38-208ENST00000488058 SLC3A2P08195 630 aaKnown RBP28.26■■■□□ 2.11
RNF38-208ENST00000488058 IRF5Q13568 498 aa28.26■■■□□ 2.11
RNF38-208ENST00000488058 VPS53Q5VIR6 699 aa28.26■■■□□ 2.11
RNF38-208ENST00000488058 POTEEQ6S8J3 1075 aa28.26■■■□□ 2.11
RNF38-208ENST00000488058 SAMD1Q6SPF0 538 aaPredicted RBP28.26■■■□□ 2.11
RNF38-208ENST00000488058 LPAR1Q92633 364 aa28.26■■■□□ 2.11
RNF38-208ENST00000488058 RABGAP1Q9Y3P9 1069 aa28.26■■■□□ 2.11
RNF38-208ENST00000488058 PDE4BQ07343 736 aa28.25■■■□□ 2.11
RNF38-208ENST00000488058 MCMDC2Q4G0Z9 681 aa28.25■■■□□ 2.11
RNF38-208ENST00000488058 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.25■■■□□ 2.11
RNF38-208ENST00000488058 PORCNQ9H237 461 aa28.25■■■□□ 2.11
RNF38-208ENST00000488058 FOXP2O15409 715 aa28.24■■■□□ 2.11
RNF38-208ENST00000488058 CNMDO75829 334 aa28.24■■■□□ 2.11
RNF38-208ENST00000488058 MAPK4P31152 587 aa28.24■■■□□ 2.11
RNF38-208ENST00000488058 COG2Q14746 738 aa28.24■■■□□ 2.11
RNF38-208ENST00000488058 WDR78Q5VTH9 848 aa28.24■■■□□ 2.11
RNF38-208ENST00000488058 GOPCQ9HD26 462 aa28.24■■■□□ 2.11
RNF38-208ENST00000488058 PLXNB2O15031 1838 aa28.23■■■□□ 2.11
RNF38-208ENST00000488058 CCNA1P78396 465 aa28.23■■■□□ 2.11
RNF38-208ENST00000488058 PXYLP1Q8TE99 480 aa28.23■■■□□ 2.11
RNF38-208ENST00000488058 BTBD7Q9P203 1132 aa28.23■■■□□ 2.11
RNF38-208ENST00000488058 KIAA0100Q14667 2235 aaKnown RBP28.22■■■□□ 2.11
RNF38-208ENST00000488058 WDR46O15213 610 aaKnown RBP28.22■■■□□ 2.11
RNF38-208ENST00000488058 FLOT1O75955 427 aa28.22■■■□□ 2.11
RNF38-208ENST00000488058 INHAP05111 366 aa28.22■■■□□ 2.11
RNF38-208ENST00000488058 CCL5P13501 91 aa28.22■■■□□ 2.11
RNF38-208ENST00000488058 SDSP20132 328 aa28.22■■■□□ 2.11
RNF38-208ENST00000488058 CTDSPL2Q05D32 466 aa28.22■■■□□ 2.11
RNF38-208ENST00000488058 LBX2Q6XYB7 198 aa28.22■■■□□ 2.11
RNF38-208ENST00000488058 HOXC10Q9NYD6 342 aa28.22■■■□□ 2.11
RNF38-208ENST00000488058 GJD2Q9UKL4 321 aa28.22■■■□□ 2.11
RNF38-208ENST00000488058 MYH4Q9Y623 1939 aa28.22■■■□□ 2.11
RNF38-208ENST00000488058 TSPY3P0CV98 308 aa28.21■■■□□ 2.11
RNF38-208ENST00000488058 TSPY8P0CW00 308 aa28.21■■■□□ 2.11
RNF38-208ENST00000488058 CYP2B6P20813 491 aa28.21■■■□□ 2.11
RNF38-208ENST00000488058 GPR142Q7Z601 462 aa28.21■■■□□ 2.11
RNF38-208ENST00000488058 ZNF589Q86UQ0 364 aaPredicted RBP28.21■■■□□ 2.11
RNF38-208ENST00000488058 TICAM2Q86XR7 235 aa28.21■■■□□ 2.11
RNF38-208ENST00000488058 NUDT12Q9BQG2 462 aa28.21■■■□□ 2.11
RNF38-208ENST00000488058 RNF208Q9H0X6 261 aa28.21■■■□□ 2.11
RNF38-208ENST00000488058 PDE4AP27815 886 aa28.2■■■□□ 2.1
RNF38-208ENST00000488058 FAM47AQ5JRC9 791 aa28.2■■■□□ 2.1
RNF38-208ENST00000488058 PLEKHH3Q7Z736 793 aa28.2■■■□□ 2.1
RNF38-208ENST00000488058 DIAPH3Q9NSV4 1193 aa28.2■■■□□ 2.1
RNF38-208ENST00000488058 NYAP2Q9P242 653 aa28.2■■■□□ 2.1
RNF38-208ENST00000488058 CLIP2Q9UDT6 1046 aa28.2■■■□□ 2.1
RNF38-208ENST00000488058 RLFQ13129 1914 aa28.2■■■□□ 2.1
RNF38-208ENST00000488058 CCDC171Q6TFL3 1326 aa28.19■■■□□ 2.1
RNF38-208ENST00000488058 DSG3P32926 999 aa28.19■■■□□ 2.1
RNF38-208ENST00000488058 SOCS4Q8WXH5 440 aa28.19■■■□□ 2.1
RNF38-208ENST00000488058 UNC93B1Q9H1C4 597 aa28.19■■■□□ 2.1
RNF38-208ENST00000488058 PARP14Q460N5 1801 aa28.18■■■□□ 2.1
RNF38-208ENST00000488058 TFAP4Q01664 338 aa28.18■■■□□ 2.1
RNF38-208ENST00000488058 FAM83BQ5T0W9 1011 aa28.18■■■□□ 2.1
RNF38-208ENST00000488058 ATG4CQ96DT6 458 aa28.18■■■□□ 2.1
RNF38-208ENST00000488058 CEP95Q96GE4 821 aa28.18■■■□□ 2.1
RNF38-208ENST00000488058 A0A0G2JMZ2 1700 aa28.18■■■□□ 2.1
RNF38-208ENST00000488058 CENPFP49454 3210 aa28.17■■■□□ 2.1
RNF38-208ENST00000488058 IGKV6D-41A0A0C4DH26 115 aa28.17■■■□□ 2.1
RNF38-208ENST00000488058 HSPD1P10809 573 aaKnown RBP28.17■■■□□ 2.1
RNF38-208ENST00000488058 PLS1Q14651 629 aa28.17■■■□□ 2.1
RNF38-208ENST00000488058 CWC27Q6UX04 472 aaKnown RBP28.17■■■□□ 2.1
RNF38-208ENST00000488058 NEDD1Q8NHV4 660 aa28.17■■■□□ 2.1
RNF38-208ENST00000488058 INCENPQ9NQS7 918 aa28.17■■■□□ 2.1
RNF38-208ENST00000488058 MFAP1P55081 439 aaKnown RBP28.16■■■□□ 2.1
RNF38-208ENST00000488058 ALX1Q15699 326 aa28.16■■■□□ 2.1
RNF38-208ENST00000488058 NUP88Q99567 741 aaPredicted RBP28.16■■■□□ 2.1
RNF38-208ENST00000488058 TOMM22Q9NS69 142 aa28.16■■■□□ 2.1
RNF38-208ENST00000488058 FBXO28Q9NVF7 368 aa28.16■■■□□ 2.1
RNF38-208ENST00000488058 MTMR4Q9NYA4 1195 aa28.16■■■□□ 2.1
RNF38-208ENST00000488058 IVNS1ABPQ9Y6Y0 642 aa28.16■■■□□ 2.1
RNF38-208ENST00000488058 TSPY2A6NKD2 308 aa28.15■■■□□ 2.1
RNF38-208ENST00000488058 FGAP02671 866 aa28.15■■■□□ 2.1
RNF38-208ENST00000488058 HMGCRP04035 888 aa28.15■■■□□ 2.1
RNF38-208ENST00000488058 RGS2P41220 211 aa28.15■■■□□ 2.1
RNF38-208ENST00000488058 LRRC47Q8N1G4 583 aaKnown RBP28.15■■■□□ 2.1
RNF38-208ENST00000488058 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.15■■■□□ 2.1
RNF38-208ENST00000488058 PLIN4Q96Q06 1357 aa28.14■■■□□ 2.1
RNF38-208ENST00000488058 COL11A1P12107 1806 aaPredicted RBP28.14■■■□□ 2.1
RNF38-208ENST00000488058 F5H6K3 240 aa28.14■■■□□ 2.1
RNF38-208ENST00000488058 HIP1O00291 1037 aa28.14■■■□□ 2.1
RNF38-208ENST00000488058 TTLL1O95922 423 aa28.14■■■□□ 2.1
RNF38-208ENST00000488058 NDUFB10O96000 172 aa28.14■■■□□ 2.1
RNF38-208ENST00000488058 GJB1P08034 283 aa28.14■■■□□ 2.1
RNF38-208ENST00000488058 KLRC3Q07444 240 aa28.14■■■□□ 2.1
RNF38-208ENST00000488058 MORN1Q5T089 497 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms