RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 RASA1P20936 1047 aa13.68□□□□□ -0.22
SPEN-205ENST00000487496 MAPK4P31152 587 aa13.68□□□□□ -0.22
SPEN-205ENST00000487496 ATP2B2Q01814 1243 aa13.68□□□□□ -0.22
SPEN-205ENST00000487496 NUCB1Q02818 461 aa13.68□□□□□ -0.22
SPEN-205ENST00000487496 COG2Q14746 738 aa13.68□□□□□ -0.22
SPEN-205ENST00000487496 CCAR1Q8IX12 1150 aaKnown RBP13.68□□□□□ -0.22
SPEN-205ENST00000487496 LPAR1Q92633 364 aa13.68□□□□□ -0.22
SPEN-205ENST00000487496 RNF208Q9H0X6 261 aa13.68□□□□□ -0.22
SPEN-205ENST00000487496 SH2D4AQ9H788 454 aa13.68□□□□□ -0.22
SPEN-205ENST00000487496 VCPKMTQ9H867 229 aa13.68□□□□□ -0.22
SPEN-205ENST00000487496 MKNK2Q9HBH9 465 aa13.68□□□□□ -0.22
SPEN-205ENST00000487496 CENPFP49454 3210 aa13.68□□□□□ -0.22
SPEN-205ENST00000487496 GJB1P08034 283 aa13.67□□□□□ -0.22
SPEN-205ENST00000487496 CCDC129Q6ZRS4 1044 aa13.67□□□□□ -0.22
SPEN-205ENST00000487496 GPR142Q7Z601 462 aa13.67□□□□□ -0.22
SPEN-205ENST00000487496 PLEKHM2Q8IWE5 1019 aa13.67□□□□□ -0.22
SPEN-205ENST00000487496 SPICE1Q8N0Z3 855 aa13.67□□□□□ -0.22
SPEN-205ENST00000487496 NUDT12Q9BQG2 462 aa13.67□□□□□ -0.22
SPEN-205ENST00000487496 TANGO6Q9C0B7 1094 aa13.67□□□□□ -0.22
SPEN-205ENST00000487496 NAPBQ9H115 298 aa13.67□□□□□ -0.22
SPEN-205ENST00000487496 UNC93B1Q9H1C4 597 aa13.67□□□□□ -0.22
SPEN-205ENST00000487496 HOXC10Q9NYD6 342 aa13.67□□□□□ -0.22
SPEN-205ENST00000487496 BTBD7Q9P203 1132 aa13.67□□□□□ -0.22
SPEN-205ENST00000487496 PDE4DIPQ5VU43 2346 aa13.66□□□□□ -0.22
SPEN-205ENST00000487496 FOXP2O15409 715 aa13.66□□□□□ -0.22
SPEN-205ENST00000487496 CYP2B6P20813 491 aa13.66□□□□□ -0.22
SPEN-205ENST00000487496 GJA8P48165 433 aa13.66□□□□□ -0.22
SPEN-205ENST00000487496 CCNA1P78396 465 aa13.66□□□□□ -0.22
SPEN-205ENST00000487496 PLEKHH3Q7Z736 793 aa13.66□□□□□ -0.22
SPEN-205ENST00000487496 TICAM2Q86XR7 235 aa13.66□□□□□ -0.22
SPEN-205ENST00000487496 ZNF444Q8N0Y2 327 aaPredicted RBP13.66□□□□□ -0.22
SPEN-205ENST00000487496 NKX2-3Q8TAU0 364 aa13.66□□□□□ -0.22
SPEN-205ENST00000487496 SOCS4Q8WXH5 440 aa13.66□□□□□ -0.22
SPEN-205ENST00000487496 SHISA4Q96DD7 197 aa13.66□□□□□ -0.22
SPEN-205ENST00000487496 ZNF287Q9HBT7 754 aa13.66□□□□□ -0.22
SPEN-205ENST00000487496 HELLSQ9NRZ9 838 aa13.66□□□□□ -0.22
SPEN-205ENST00000487496 MYH8P13535 1937 aa13.66□□□□□ -0.22
SPEN-205ENST00000487496 TRIM6-TRIM34B2RNG4 842 aa13.65□□□□□ -0.22
SPEN-205ENST00000487496 WDR46O15213 610 aaKnown RBP13.65□□□□□ -0.22
SPEN-205ENST00000487496 PRDM1O75626 825 aa13.65□□□□□ -0.22
SPEN-205ENST00000487496 FLOT1O75955 427 aa13.65□□□□□ -0.22
SPEN-205ENST00000487496 HMGCRP04035 888 aa13.65□□□□□ -0.22
SPEN-205ENST00000487496 DSG3P32926 999 aa13.65□□□□□ -0.22
SPEN-205ENST00000487496 IRX6P78412 446 aaPredicted RBP13.65□□□□□ -0.22
SPEN-205ENST00000487496 PPARAQ07869 468 aa13.65□□□□□ -0.22
SPEN-205ENST00000487496 MORN1Q5T089 497 aa13.65□□□□□ -0.22
SPEN-205ENST00000487496 VPS53Q5VIR6 699 aa13.65□□□□□ -0.22
SPEN-205ENST00000487496 U2AF1L4Q8WU68 220 aaKnown RBP13.65□□□□□ -0.22
SPEN-205ENST00000487496 USP6NLQ92738 828 aa13.65□□□□□ -0.22
SPEN-205ENST00000487496 FAM227BQ96M60 508 aa13.65□□□□□ -0.22
SPEN-205ENST00000487496 OSBPL3Q9H4L5 887 aa13.65□□□□□ -0.22
SPEN-205ENST00000487496 IGKV6D-41A0A0C4DH26 115 aa13.64□□□□□ -0.23
SPEN-205ENST00000487496 A0A0D9SFI3 127 aa13.64□□□□□ -0.23
SPEN-205ENST00000487496 SGPL1O95470 568 aa13.64□□□□□ -0.23
SPEN-205ENST00000487496 SLC3A2P08195 630 aaKnown RBP13.64□□□□□ -0.23
SPEN-205ENST00000487496 XRCC5P13010 732 aaKnown RBP13.64□□□□□ -0.23
SPEN-205ENST00000487496 PDE4BQ07343 736 aa13.64□□□□□ -0.23
SPEN-205ENST00000487496 TRIM32Q13049 653 aa13.64□□□□□ -0.23
SPEN-205ENST00000487496 MCMDC2Q4G0Z9 681 aa13.64□□□□□ -0.23
SPEN-205ENST00000487496 TRIB2Q92519 343 aa13.64□□□□□ -0.23
SPEN-205ENST00000487496 RILPL2Q969X0 211 aa13.64□□□□□ -0.23
SPEN-205ENST00000487496 CWC22Q9HCG8 908 aaKnown RBP13.64□□□□□ -0.23
SPEN-205ENST00000487496 GOPCQ9HD26 462 aa13.64□□□□□ -0.23
SPEN-205ENST00000487496 PAK6Q9NQU5 681 aaPredicted RBP13.64□□□□□ -0.23
SPEN-205ENST00000487496 NYAP2Q9P242 653 aa13.64□□□□□ -0.23
SPEN-205ENST00000487496 BRCA2P51587 3418 aa13.64□□□□□ -0.23
SPEN-205ENST00000487496 PTPREP23469 700 aa13.63□□□□□ -0.23
SPEN-205ENST00000487496 RGS2P41220 211 aa13.63□□□□□ -0.23
SPEN-205ENST00000487496 NMIQ13287 307 aaPredicted RBP13.63□□□□□ -0.23
SPEN-205ENST00000487496 WDR78Q5VTH9 848 aa13.63□□□□□ -0.23
SPEN-205ENST00000487496 PRPF38BQ5VTL8 546 aaKnown RBP13.63□□□□□ -0.23
SPEN-205ENST00000487496 MB21D1Q8N884 522 aa13.63□□□□□ -0.23
SPEN-205ENST00000487496 ATG4CQ96DT6 458 aa13.63□□□□□ -0.23
SPEN-205ENST00000487496 CEP95Q96GE4 821 aa13.63□□□□□ -0.23
SPEN-205ENST00000487496 DEFB118Q96PH6 123 aa13.63□□□□□ -0.23
SPEN-205ENST00000487496 MOV10L1Q9BXT6 1211 aaKnown RBP13.63□□□□□ -0.23
SPEN-205ENST00000487496 SPATC1LQ9H0A9 340 aa13.63□□□□□ -0.23
SPEN-205ENST00000487496 FBXO28Q9NVF7 368 aa13.63□□□□□ -0.23
SPEN-205ENST00000487496 CLIP2Q9UDT6 1046 aa13.63□□□□□ -0.23
SPEN-205ENST00000487496 TNRC18O15417 2968 aaPredicted RBP13.62□□□□□ -0.23
SPEN-205ENST00000487496 PLXNB2O15031 1838 aa13.62□□□□□ -0.23
SPEN-205ENST00000487496 SLC15A5A6NIM6 579 aa13.62□□□□□ -0.23
SPEN-205ENST00000487496 F5H6K3 240 aa13.62□□□□□ -0.23
SPEN-205ENST00000487496 RAD21O60216 631 aa13.62□□□□□ -0.23
SPEN-205ENST00000487496 KLRC3Q07444 240 aa13.62□□□□□ -0.23
SPEN-205ENST00000487496 MAP2K5Q13163 448 aa13.62□□□□□ -0.23
SPEN-205ENST00000487496 ALX1Q15699 326 aa13.62□□□□□ -0.23
SPEN-205ENST00000487496 FAM47AQ5JRC9 791 aa13.62□□□□□ -0.23
SPEN-205ENST00000487496 FAM83BQ5T0W9 1011 aa13.62□□□□□ -0.23
SPEN-205ENST00000487496 TRMT44Q8IYL2 757 aaKnown RBP13.62□□□□□ -0.23
SPEN-205ENST00000487496 NEDD1Q8NHV4 660 aa13.62□□□□□ -0.23
SPEN-205ENST00000487496 MKL1Q969V6 931 aa13.62□□□□□ -0.23
SPEN-205ENST00000487496 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.62□□□□□ -0.23
SPEN-205ENST00000487496 MTMR4Q9NYA4 1195 aa13.62□□□□□ -0.23
SPEN-205ENST00000487496 ADAMTS5Q9UNA0 930 aa13.62□□□□□ -0.23
SPEN-205ENST00000487496 GREB1LQ9C091 1923 aaPredicted RBP13.62□□□□□ -0.23
SPEN-205ENST00000487496 RPTORQ8N122 1335 aa13.62□□□□□ -0.23
SPEN-205ENST00000487496 RLFQ13129 1914 aa13.61□□□□□ -0.23
SPEN-205ENST00000487496 NDUFB10O96000 172 aa13.61□□□□□ -0.23
SPEN-205ENST00000487496 FGAP02671 866 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms