RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 FLT3LGP49771 235 aa12.66□□□□□ -0.38
TOP3B-216ENST00000487485 JAG1P78504 1218 aa12.66□□□□□ -0.38
TOP3B-216ENST00000487485 ABCB5Q2M3G0 1257 aa12.66□□□□□ -0.38
TOP3B-216ENST00000487485 ZNF444Q8N0Y2 327 aaPredicted RBP12.66□□□□□ -0.38
TOP3B-216ENST00000487485 PARK7Q99497 189 aaKnown RBP12.66□□□□□ -0.38
TOP3B-216ENST00000487485 CABP5Q9NP86 173 aa12.66□□□□□ -0.38
TOP3B-216ENST00000487485 PICK1Q9NRD5 415 aa12.66□□□□□ -0.38
TOP3B-216ENST00000487485 A0A1W2PPC1 479 aa12.65□□□□□ -0.38
TOP3B-216ENST00000487485 MPHOSPH10O00566 681 aaKnown RBP12.65□□□□□ -0.38
TOP3B-216ENST00000487485 REC8O95072 547 aa12.65□□□□□ -0.38
TOP3B-216ENST00000487485 GH2P01242 217 aa12.65□□□□□ -0.38
TOP3B-216ENST00000487485 INHAP05111 366 aa12.65□□□□□ -0.38
TOP3B-216ENST00000487485 ASNSP08243 561 aa12.65□□□□□ -0.38
TOP3B-216ENST00000487485 CYP21A2P08686 494 aa12.65□□□□□ -0.38
TOP3B-216ENST00000487485 FGRP09769 529 aa12.65□□□□□ -0.38
TOP3B-216ENST00000487485 RASA1P20936 1047 aa12.65□□□□□ -0.38
TOP3B-216ENST00000487485 NECTIN1Q15223 517 aa12.65□□□□□ -0.38
TOP3B-216ENST00000487485 SHROOM1Q2M3G4 852 aaPredicted RBP12.65□□□□□ -0.38
TOP3B-216ENST00000487485 AKNAD1Q5T1N1 836 aa12.65□□□□□ -0.38
TOP3B-216ENST00000487485 MFSD6Q6ZSS7 791 aa12.65□□□□□ -0.38
TOP3B-216ENST00000487485 CCDC17Q96LX7 622 aa12.65□□□□□ -0.38
TOP3B-216ENST00000487485 DEFB118Q96PH6 123 aa12.65□□□□□ -0.38
TOP3B-216ENST00000487485 NBPF3Q9H094 633 aa12.65□□□□□ -0.38
TOP3B-216ENST00000487485 GINM1Q9NU53 330 aa12.65□□□□□ -0.38
TOP3B-216ENST00000487485 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.65□□□□□ -0.38
TOP3B-216ENST00000487485 TACC3Q9Y6A5 838 aa12.65□□□□□ -0.38
TOP3B-216ENST00000487485 AKR1B1P15121 316 aa12.64□□□□□ -0.39
TOP3B-216ENST00000487485 PTPRAP18433 802 aa12.64□□□□□ -0.39
TOP3B-216ENST00000487485 RAB3GAP1Q15042 981 aa12.64□□□□□ -0.39
TOP3B-216ENST00000487485 CCDC84Q86UT8 332 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-216ENST00000487485 TBC1D10CQ8IV04 446 aa12.64□□□□□ -0.39
TOP3B-216ENST00000487485 STAG1Q8WVM7 1258 aa12.64□□□□□ -0.39
TOP3B-216ENST00000487485 RNF41Q9H4P4 317 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-216ENST00000487485 TOMM22Q9NS69 142 aa12.64□□□□□ -0.39
TOP3B-216ENST00000487485 ZBTB21Q9ULJ3 1066 aa12.64□□□□□ -0.39
TOP3B-216ENST00000487485 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.64□□□□□ -0.39
TOP3B-216ENST00000487485 ZHX2Q9Y6X8 837 aa12.64□□□□□ -0.39
TOP3B-216ENST00000487485 GREB1LQ9C091 1923 aaPredicted RBP12.63□□□□□ -0.39
TOP3B-216ENST00000487485 USP17L5A8MUK1 530 aa12.63□□□□□ -0.39
TOP3B-216ENST00000487485 ORC4O43929 436 aa12.63□□□□□ -0.39
TOP3B-216ENST00000487485 RANBP6O60518 1105 aaKnown RBP12.63□□□□□ -0.39
TOP3B-216ENST00000487485 TSPY3P0CV98 308 aa12.63□□□□□ -0.39
TOP3B-216ENST00000487485 TSPY8P0CW00 308 aa12.63□□□□□ -0.39
TOP3B-216ENST00000487485 PCP11498 1178 aaKnown RBP12.63□□□□□ -0.39
TOP3B-216ENST00000487485 GUCY1A2P33402 732 aa12.63□□□□□ -0.39
TOP3B-216ENST00000487485 TFAP4Q01664 338 aa12.63□□□□□ -0.39
TOP3B-216ENST00000487485 C8orf34Q49A92 452 aa12.63□□□□□ -0.39
TOP3B-216ENST00000487485 FAM47AQ5JRC9 791 aa12.63□□□□□ -0.39
TOP3B-216ENST00000487485 RRP12Q5JTH9 1297 aaKnown RBP12.63□□□□□ -0.39
TOP3B-216ENST00000487485 CREB3L3Q68CJ9 461 aa12.63□□□□□ -0.39
TOP3B-216ENST00000487485 TMEM179Q6ZVK1 233 aa12.63□□□□□ -0.39
TOP3B-216ENST00000487485 PXYLP1Q8TE99 480 aa12.63□□□□□ -0.39
TOP3B-216ENST00000487485 DIS3LQ8TF46 1054 aaKnown RBP12.63□□□□□ -0.39
TOP3B-216ENST00000487485 PAWRQ96IZ0 340 aaKnown RBP12.63□□□□□ -0.39
TOP3B-216ENST00000487485 CRISPLD2Q9H0B8 497 aa12.63□□□□□ -0.39
TOP3B-216ENST00000487485 ALPK3Q96L96 1907 aa12.62□□□□□ -0.39
TOP3B-216ENST00000487485 A0A0G2JLL6 359 aaPredicted RBP12.62□□□□□ -0.39
TOP3B-216ENST00000487485 TSPY2A6NKD2 308 aa12.62□□□□□ -0.39
TOP3B-216ENST00000487485 SLC27A2O14975 620 aa12.62□□□□□ -0.39
TOP3B-216ENST00000487485 EIF5BO60841 1220 aaKnown RBP12.62□□□□□ -0.39
TOP3B-216ENST00000487485 IRF5Q13568 498 aa12.62□□□□□ -0.39
TOP3B-216ENST00000487485 SEPT2Q15019 361 aa12.62□□□□□ -0.39
TOP3B-216ENST00000487485 GADL1Q6ZQY3 521 aa12.62□□□□□ -0.39
TOP3B-216ENST00000487485 FASTKD5Q7L8L6 764 aaKnown RBP12.62□□□□□ -0.39
TOP3B-216ENST00000487485 PRRT2Q7Z6L0 340 aaPredicted RBP12.62□□□□□ -0.39
TOP3B-216ENST00000487485 USP26Q9BXU7 913 aa12.62□□□□□ -0.39
TOP3B-216ENST00000487485 TBC1D2Q9BYX2 928 aa12.62□□□□□ -0.39
TOP3B-216ENST00000487485 AS3MTQ9HBK9 375 aa12.62□□□□□ -0.39
TOP3B-216ENST00000487485 PAK6Q9NQU5 681 aaPredicted RBP12.62□□□□□ -0.39
TOP3B-216ENST00000487485 AFG3L2Q9Y4W6 797 aa12.62□□□□□ -0.39
TOP3B-216ENST00000487485 TAF6LQ9Y6J9 622 aa12.62□□□□□ -0.39
TOP3B-216ENST00000487485 PTPRFP10586 1907 aa12.62□□□□□ -0.39
TOP3B-216ENST00000487485 MYH4Q9Y623 1939 aa12.62□□□□□ -0.39
TOP3B-216ENST00000487485 NEDD4P46934 1319 aa12.62□□□□□ -0.39
TOP3B-216ENST00000487485 E7EWF7 191 aa12.61□□□□□ -0.39
TOP3B-216ENST00000487485 TNPO2O14787 897 aaKnown RBP12.61□□□□□ -0.39
TOP3B-216ENST00000487485 EPB41L2O43491 1005 aaKnown RBP12.61□□□□□ -0.39
TOP3B-216ENST00000487485 SEC24BO95487 1268 aa12.61□□□□□ -0.39
TOP3B-216ENST00000487485 SPP2Q13103 211 aa12.61□□□□□ -0.39
TOP3B-216ENST00000487485 RNF20Q5VTR2 975 aa12.61□□□□□ -0.39
TOP3B-216ENST00000487485 ZNF280CQ8ND82 737 aa12.61□□□□□ -0.39
TOP3B-216ENST00000487485 NEDD1Q8NHV4 660 aa12.61□□□□□ -0.39
TOP3B-216ENST00000487485 ESR2Q92731 530 aa12.61□□□□□ -0.39
TOP3B-216ENST00000487485 GDF15Q99988 308 aa12.61□□□□□ -0.39
TOP3B-216ENST00000487485 WDR18Q9BV38 432 aa12.61□□□□□ -0.39
TOP3B-216ENST00000487485 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.61□□□□□ -0.39
TOP3B-216ENST00000487485 KRT23Q9C075 422 aa12.61□□□□□ -0.39
TOP3B-216ENST00000487485 CNNM2Q9H8M5 875 aa12.61□□□□□ -0.39
TOP3B-216ENST00000487485 ZMYND8Q9ULU4 1186 aaPredicted RBP12.61□□□□□ -0.39
TOP3B-216ENST00000487485 TRIM75PA6NK02 468 aa12.6□□□□□ -0.39
TOP3B-216ENST00000487485 B4E1Z4 1266 aa12.6□□□□□ -0.39
TOP3B-216ENST00000487485 KDM4AO75164 1064 aa12.6□□□□□ -0.39
TOP3B-216ENST00000487485 BMP8BP34820 402 aa12.6□□□□□ -0.39
TOP3B-216ENST00000487485 HSPA4P34932 840 aa12.6□□□□□ -0.39
TOP3B-216ENST00000487485 MNX1P50219 401 aaPredicted RBP12.6□□□□□ -0.39
TOP3B-216ENST00000487485 TRDNQ13061 729 aa12.6□□□□□ -0.39
TOP3B-216ENST00000487485 Q7L0L9 218 aa12.6□□□□□ -0.39
TOP3B-216ENST00000487485 NECAB2Q7Z6G3 386 aa12.6□□□□□ -0.39
TOP3B-216ENST00000487485 DEFB123Q8N688 67 aa12.6□□□□□ -0.39
TOP3B-216ENST00000487485 ANKRD13CQ8N6S4 541 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms