RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 CRNKL1Q9BZJ0 848 aaKnown RBP23.59■■□□□ 1.37
SMPDL3A-202ENST00000487215 TANGO6Q9C0B7 1094 aa23.59■■□□□ 1.37
SMPDL3A-202ENST00000487215 SPATC1LQ9H0A9 340 aa23.59■■□□□ 1.37
SMPDL3A-202ENST00000487215 MCM9Q9NXL9 1143 aa23.59■■□□□ 1.37
SMPDL3A-202ENST00000487215 HOXC10Q9NYD6 342 aa23.59■■□□□ 1.37
SMPDL3A-202ENST00000487215 TTF1Q15361 905 aaPredicted RBP23.58■■□□□ 1.37
SMPDL3A-202ENST00000487215 SLC9C2Q5TAH2 1124 aa23.58■■□□□ 1.37
SMPDL3A-202ENST00000487215 SHCBP1Q8NEM2 672 aa23.58■■□□□ 1.37
SMPDL3A-202ENST00000487215 GUCD1Q96NT3 240 aa23.58■■□□□ 1.37
SMPDL3A-202ENST00000487215 IL1RAPL2Q9NP60 686 aa23.58■■□□□ 1.37
SMPDL3A-202ENST00000487215 PRKAG2Q9UGJ0 569 aa23.58■■□□□ 1.37
SMPDL3A-202ENST00000487215 DNAH12Q6ZR08 3092 aa23.58■■□□□ 1.36
SMPDL3A-202ENST00000487215 STRNO43815 780 aa23.57■■□□□ 1.36
SMPDL3A-202ENST00000487215 ERCC3P19447 782 aa23.57■■□□□ 1.36
SMPDL3A-202ENST00000487215 KIAA1755Q5JYT7 1200 aa23.57■■□□□ 1.36
SMPDL3A-202ENST00000487215 ANO1Q5XXA6 986 aa23.57■■□□□ 1.36
SMPDL3A-202ENST00000487215 SLC44A5Q8NCS7 719 aa23.57■■□□□ 1.36
SMPDL3A-202ENST00000487215 SDR42E1Q8WUS8 393 aa23.57■■□□□ 1.36
SMPDL3A-202ENST00000487215 ATP11BQ9Y2G3 1177 aa23.57■■□□□ 1.36
SMPDL3A-202ENST00000487215 ZNF532Q9HCE3 1301 aa23.57■■□□□ 1.36
SMPDL3A-202ENST00000487215 LTBP2Q14767 1821 aa23.56■■□□□ 1.36
SMPDL3A-202ENST00000487215 COBLO75128 1261 aa23.56■■□□□ 1.36
SMPDL3A-202ENST00000487215 CYP2D6P10635 497 aa23.56■■□□□ 1.36
SMPDL3A-202ENST00000487215 ARRDC4Q8NCT1 418 aa23.56■■□□□ 1.36
SMPDL3A-202ENST00000487215 DCP1AQ9NPI6 582 aaPredicted RBP23.56■■□□□ 1.36
SMPDL3A-202ENST00000487215 RLFQ13129 1914 aa23.55■■□□□ 1.36
SMPDL3A-202ENST00000487215 SEPT4O43236 478 aa23.55■■□□□ 1.36
SMPDL3A-202ENST00000487215 SLC39A5Q6ZMH5 540 aa23.55■■□□□ 1.36
SMPDL3A-202ENST00000487215 TMEM179Q6ZVK1 233 aa23.55■■□□□ 1.36
SMPDL3A-202ENST00000487215 LCORLQ8N3X6 602 aa23.55■■□□□ 1.36
SMPDL3A-202ENST00000487215 RHPN1Q8TCX5 695 aa23.55■■□□□ 1.36
SMPDL3A-202ENST00000487215 FAM161BQ96MY7 647 aa23.55■■□□□ 1.36
SMPDL3A-202ENST00000487215 TCRBV5S4A2TA0A5A2 114 aa23.54■■□□□ 1.36
SMPDL3A-202ENST00000487215 KBTBD13C9JR72 458 aa23.54■■□□□ 1.36
SMPDL3A-202ENST00000487215 DSG3P32926 999 aa23.54■■□□□ 1.36
SMPDL3A-202ENST00000487215 CLEC10AQ8IUN9 316 aa23.54■■□□□ 1.36
SMPDL3A-202ENST00000487215 MB21D1Q8N884 522 aa23.54■■□□□ 1.36
SMPDL3A-202ENST00000487215 GOLIM4O00461 696 aa23.53■■□□□ 1.36
SMPDL3A-202ENST00000487215 PLS1Q14651 629 aa23.53■■□□□ 1.36
SMPDL3A-202ENST00000487215 HSP90AB4PQ58FF6 505 aa23.53■■□□□ 1.36
SMPDL3A-202ENST00000487215 ATG4CQ96DT6 458 aa23.53■■□□□ 1.36
SMPDL3A-202ENST00000487215 DYNLL2Q96FJ2 89 aa23.53■■□□□ 1.36
SMPDL3A-202ENST00000487215 DNAJC2Q99543 621 aaKnown RBP23.53■■□□□ 1.36
SMPDL3A-202ENST00000487215 MROH8Q9H579 483 aa23.53■■□□□ 1.36
SMPDL3A-202ENST00000487215 SWAP70Q9UH65 585 aa23.53■■□□□ 1.36
SMPDL3A-202ENST00000487215 FLOT1O75955 427 aa23.52■■□□□ 1.36
SMPDL3A-202ENST00000487215 MYCNP04198 464 aaPredicted RBP23.52■■□□□ 1.36
SMPDL3A-202ENST00000487215 SNX17Q15036 470 aa23.52■■□□□ 1.36
SMPDL3A-202ENST00000487215 TRIM60Q495X7 471 aa23.52■■□□□ 1.36
SMPDL3A-202ENST00000487215 PRAMEF19Q5SWL8 479 aa23.52■■□□□ 1.36
SMPDL3A-202ENST00000487215 ZNF697Q5TEC3 545 aa23.52■■□□□ 1.36
SMPDL3A-202ENST00000487215 NCAPG2Q86XI2 1143 aa23.52■■□□□ 1.36
SMPDL3A-202ENST00000487215 SIAH1Q8IUQ4 282 aa23.52■■□□□ 1.36
SMPDL3A-202ENST00000487215 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.52■■□□□ 1.36
SMPDL3A-202ENST00000487215 ABRAQ8N0Z2 381 aa23.52■■□□□ 1.36
SMPDL3A-202ENST00000487215 SPICE1Q8N0Z3 855 aa23.52■■□□□ 1.36
SMPDL3A-202ENST00000487215 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.52■■□□□ 1.36
SMPDL3A-202ENST00000487215 PRDM5Q9NQX1 630 aaPredicted RBP23.52■■□□□ 1.36
SMPDL3A-202ENST00000487215 SLC5A4Q9NY91 659 aa23.52■■□□□ 1.36
SMPDL3A-202ENST00000487215 TMX2Q9Y320 296 aa23.52■■□□□ 1.36
SMPDL3A-202ENST00000487215 CUL9Q8IWT3 2517 aa23.52■■□□□ 1.35
SMPDL3A-202ENST00000487215 UNC80Q8N2C7 3258 aa23.51■■□□□ 1.35
SMPDL3A-202ENST00000487215 AKR1B1P15121 316 aa23.51■■□□□ 1.35
SMPDL3A-202ENST00000487215 ICA1Q05084 483 aa23.51■■□□□ 1.35
SMPDL3A-202ENST00000487215 SHHQ15465 462 aa23.51■■□□□ 1.35
SMPDL3A-202ENST00000487215 PANK1Q8TE04 598 aa23.51■■□□□ 1.35
SMPDL3A-202ENST00000487215 MAML3Q96JK9 1138 aa23.51■■□□□ 1.35
SMPDL3A-202ENST00000487215 COL25A1Q9BXS0 654 aaPredicted RBP23.51■■□□□ 1.35
SMPDL3A-202ENST00000487215 ARMT1Q9H993 441 aa23.51■■□□□ 1.35
SMPDL3A-202ENST00000487215 ARHGEF10LQ9HCE6 1279 aa23.51■■□□□ 1.35
SMPDL3A-202ENST00000487215 LRRC41Q15345 812 aa23.5■■□□□ 1.35
SMPDL3A-202ENST00000487215 C9orf50Q5SZB4 431 aa23.5■■□□□ 1.35
SMPDL3A-202ENST00000487215 CLASRPQ8N2M8 674 aaKnown RBP23.5■■□□□ 1.35
SMPDL3A-202ENST00000487215 SH2D4AQ9H788 454 aa23.5■■□□□ 1.35
SMPDL3A-202ENST00000487215 VCPKMTQ9H867 229 aa23.5■■□□□ 1.35
SMPDL3A-202ENST00000487215 LAMA2P24043 3122 aaKnown RBP23.5■■□□□ 1.35
SMPDL3A-202ENST00000487215 PRKAB2O43741 272 aa23.49■■□□□ 1.35
SMPDL3A-202ENST00000487215 ADCYAP1R1P41586 468 aa23.49■■□□□ 1.35
SMPDL3A-202ENST00000487215 FAM47AQ5JRC9 791 aa23.49■■□□□ 1.35
SMPDL3A-202ENST00000487215 SAMD1Q6SPF0 538 aaPredicted RBP23.49■■□□□ 1.35
SMPDL3A-202ENST00000487215 BADQ92934 168 aa23.49■■□□□ 1.35
SMPDL3A-202ENST00000487215 FERMT2Q96AC1 680 aa23.49■■□□□ 1.35
SMPDL3A-202ENST00000487215 PDLIM7Q9NR12 457 aa23.49■■□□□ 1.35
SMPDL3A-202ENST00000487215 SMIM22K7EJ46 135 aa23.48■■□□□ 1.35
SMPDL3A-202ENST00000487215 APBB1O00213 710 aa23.48■■□□□ 1.35
SMPDL3A-202ENST00000487215 WDR46O15213 610 aaKnown RBP23.48■■□□□ 1.35
SMPDL3A-202ENST00000487215 FCER1AP12319 257 aa23.48■■□□□ 1.35
SMPDL3A-202ENST00000487215 HNRNPUQ00839 825 aaKnown RBP eCLIP23.48■■□□□ 1.35
SMPDL3A-202ENST00000487215 TMEM132BQ14DG7 1078 aa23.48■■□□□ 1.35
SMPDL3A-202ENST00000487215 SLFNL1Q499Z3 407 aa23.48■■□□□ 1.35
SMPDL3A-202ENST00000487215 SH3RF1Q7Z6J0 888 aa23.48■■□□□ 1.35
SMPDL3A-202ENST00000487215 KIF1BPQ96EK5 621 aa23.48■■□□□ 1.35
SMPDL3A-202ENST00000487215 MBD4O95243 580 aa23.47■■□□□ 1.35
SMPDL3A-202ENST00000487215 IFIT2P09913 472 aaKnown RBP23.47■■□□□ 1.35
SMPDL3A-202ENST00000487215 C1orf53Q5VUE5 145 aa23.47■■□□□ 1.35
SMPDL3A-202ENST00000487215 ATP8A2Q9NTI2 1148 aa23.47■■□□□ 1.35
SMPDL3A-202ENST00000487215 CYP2D7A0A087X1C5 515 aa23.46■■□□□ 1.35
SMPDL3A-202ENST00000487215 TRIM43BA6NCK2 446 aa23.46■■□□□ 1.35
SMPDL3A-202ENST00000487215 SLC25A27O95847 323 aa23.46■■□□□ 1.35
SMPDL3A-202ENST00000487215 ADD2P35612 726 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms