RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 EIF4EBP3O60516 100 aaPredicted RBP8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 CYP11A1P05108 521 aa8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 GSTP1P09211 210 aaKnown RBP8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 HOXB4P17483 251 aaPredicted RBP8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 GARTP22102 1010 aa8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 DNAJA1P31689 397 aaKnown RBP8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 SETDB1Q15047 1291 aa8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 SF3A1Q15459 793 aaKnown RBP8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 ARHGEF25Q86VW2 580 aa8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 TRIM42Q8IWZ5 723 aa8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 KLHL23Q8NBE8 558 aa8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 JARID2Q92833 1246 aaPredicted RBP8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 KCNB2Q92953 911 aa8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 CORO1BQ9BR76 489 aa8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 PPP1R1BQ9UD71 204 aaPredicted RBP8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 USP21Q9UK80 565 aa8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 COL22A1Q8NFW1 1626 aaPredicted RBP8.38□□□□□ -1.07
RTFDC1-209ENST00000487211 KIAA0232Q92628 1395 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 GJA8P48165 433 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 NLRP12P59046 1061 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 SEPT6Q14141 434 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 SUZ12Q15022 739 aaKnown RBP8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 POU4F3Q15319 338 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 LCE2AQ5TA79 106 aaPredicted RBP8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 MAP1SQ66K74 1059 aaPredicted RBP8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 PDZD3Q86UT5 571 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 VPS37DQ86XT2 251 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 MAP4K3Q8IVH8 894 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 KCNH5Q8NCM2 988 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 GALNT11Q8NCW6 608 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 COG3Q96JB2 828 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 EAF1Q96JC9 268 aaPredicted RBP8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 DRC1Q96MC2 740 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 TANGO6Q9C0B7 1094 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 PRDM11Q9NQV5 511 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 KCNQ5Q9NR82 932 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 BTG4Q9NY30 223 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 NSD3Q9BZ95 1437 aa8.37□□□□□ -1.07
RTFDC1-209ENST00000487211 AKAP12Q02952 1782 aa8.36□□□□□ -1.07
RTFDC1-209ENST00000487211 ARHGEF15O94989 841 aa8.36□□□□□ -1.07
RTFDC1-209ENST00000487211 ECEL1O95672 775 aa8.36□□□□□ -1.07
RTFDC1-209ENST00000487211 MAOBP27338 520 aa8.36□□□□□ -1.07
RTFDC1-209ENST00000487211 ARID5AQ03989 594 aa8.36□□□□□ -1.07
RTFDC1-209ENST00000487211 ZNF252P-AS1Q0IIN9 211 aa8.36□□□□□ -1.07
RTFDC1-209ENST00000487211 MPRIPQ6WCQ1 1025 aa8.36□□□□□ -1.07
RTFDC1-209ENST00000487211 BNC2Q6ZN30 1099 aaPredicted RBP8.36□□□□□ -1.07
RTFDC1-209ENST00000487211 UNC5CLQ8IV45 518 aa8.36□□□□□ -1.07
RTFDC1-209ENST00000487211 NT5C1AQ9BXI3 368 aa8.36□□□□□ -1.07
RTFDC1-209ENST00000487211 USP26Q9BXU7 913 aa8.36□□□□□ -1.07
RTFDC1-209ENST00000487211 PRKAG2Q9UGJ0 569 aa8.36□□□□□ -1.07
RTFDC1-209ENST00000487211 TRPC5Q9UL62 973 aaPredicted RBP8.36□□□□□ -1.07
RTFDC1-209ENST00000487211 TNS1Q9HBL0 1735 aaKnown RBP8.36□□□□□ -1.07
RTFDC1-209ENST00000487211 MYOM1P52179 1685 aa8.36□□□□□ -1.07
RTFDC1-209ENST00000487211 NRKQ7Z2Y5 1582 aa8.35□□□□□ -1.07
RTFDC1-209ENST00000487211 DDX3YO15523 660 aaKnown RBP8.35□□□□□ -1.07
RTFDC1-209ENST00000487211 GREM1O60565 184 aa8.35□□□□□ -1.07
RTFDC1-209ENST00000487211 DEAF1O75398 565 aaPredicted RBP8.35□□□□□ -1.07
RTFDC1-209ENST00000487211 F13A1P00488 732 aa8.35□□□□□ -1.07
RTFDC1-209ENST00000487211 CD68P34810 354 aaPredicted RBP8.35□□□□□ -1.07
RTFDC1-209ENST00000487211 SNRPNP63162 240 aaKnown RBP8.35□□□□□ -1.07
RTFDC1-209ENST00000487211 CCDC84Q86UT8 332 aaPredicted RBP8.35□□□□□ -1.07
RTFDC1-209ENST00000487211 TRIM11Q96F44 468 aa8.35□□□□□ -1.07
RTFDC1-209ENST00000487211 NRSN2Q9GZP1 204 aa8.35□□□□□ -1.07
RTFDC1-209ENST00000487211 UBP1Q9NZI7 540 aa8.35□□□□□ -1.07
RTFDC1-209ENST00000487211 KNSTRNQ9Y448 316 aa8.35□□□□□ -1.07
RTFDC1-209ENST00000487211 CPDO75976 1380 aa8.35□□□□□ -1.07
RTFDC1-209ENST00000487211 MON2Q7Z3U7 1717 aa8.34□□□□□ -1.07
RTFDC1-209ENST00000487211 TNRC18O15417 2968 aaPredicted RBP8.34□□□□□ -1.07
RTFDC1-209ENST00000487211 SLIT2O94813 1529 aa8.34□□□□□ -1.07
RTFDC1-209ENST00000487211 CGNL1Q0VF96 1302 aa8.34□□□□□ -1.07
RTFDC1-209ENST00000487211 PIK3C2AO00443 1686 aa8.34□□□□□ -1.07
RTFDC1-209ENST00000487211 TLR3O15455 904 aaKnown RBP8.34□□□□□ -1.07
RTFDC1-209ENST00000487211 TRIM37O94972 964 aa8.34□□□□□ -1.07
RTFDC1-209ENST00000487211 RAC1P63000 192 aa8.34□□□□□ -1.07
RTFDC1-209ENST00000487211 RRS1Q15050 365 aaKnown RBP8.34□□□□□ -1.07
RTFDC1-209ENST00000487211 DIEXFQ68CQ4 756 aaKnown RBP8.34□□□□□ -1.07
RTFDC1-209ENST00000487211 FAM196AQ6ZSG2 479 aa8.34□□□□□ -1.07
RTFDC1-209ENST00000487211 DTWD1Q8N5C7 304 aa8.34□□□□□ -1.07
RTFDC1-209ENST00000487211 RASGRP4Q8TDF6 673 aa8.34□□□□□ -1.07
RTFDC1-209ENST00000487211 ACSBG1Q96GR2 724 aa8.34□□□□□ -1.07
RTFDC1-209ENST00000487211 OVOS2A0A0J9YW53 1432 aa8.34□□□□□ -1.07
RTFDC1-209ENST00000487211 OVOS2Q6IE36 1432 aa8.34□□□□□ -1.07
RTFDC1-209ENST00000487211 SLIT3O75094 1523 aa8.34□□□□□ -1.08
RTFDC1-209ENST00000487211 A0A0A0MRY4 1105 aa8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 TM4SF5O14894 197 aa8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 TNNT2P45379 298 aaPredicted RBP8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 EVA1CP58658 441 aa8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 PTPN11Q06124 597 aaPredicted RBP8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 APOBRQ0VD83 1088 aa8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 DDX10Q13206 875 aaKnown RBP8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 PDE3AQ14432 1141 aa8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 FOXD4L6Q3SYB3 417 aaPredicted RBP8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 PDE4DIPQ5VU43 2346 aa8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 FOXD4L3Q6VB84 417 aaPredicted RBP8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 LINC00114Q6XXX2 140 aa8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 FBXO27Q8NI29 283 aa8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 GATAD2BQ8WXI9 593 aa8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 NKD1Q969G9 470 aa8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 GAL3ST3Q96A11 431 aa8.33□□□□□ -1.08
RTFDC1-209ENST00000487211 SPATA32Q96LK8 384 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms