RNA–Protein interactions for RNA: ENST00000486943.1

CACNA1F-206, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 3

Gene CACNA1F, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-206ENST00000486943 RNF208Q9H0X6 261 aa17.2■□□□□ 0.34
CACNA1F-206ENST00000486943 EPB41L4AQ9HCS5 686 aaPredicted RBP17.2■□□□□ 0.34
CACNA1F-206ENST00000486943 SPDYE16A6NNV3 312 aaPredicted RBP17.19■□□□□ 0.34
CACNA1F-206ENST00000486943 PATL2C9JE40 543 aaKnown RBP17.19■□□□□ 0.34
CACNA1F-206ENST00000486943 HMGCRP04035 888 aa17.19■□□□□ 0.34
CACNA1F-206ENST00000486943 XRCC5P13010 732 aaKnown RBP17.19■□□□□ 0.34
CACNA1F-206ENST00000486943 Q3C1V9 767 aa17.19■□□□□ 0.34
CACNA1F-206ENST00000486943 CLEC10AQ8IUN9 316 aa17.19■□□□□ 0.34
CACNA1F-206ENST00000486943 SIAH1Q8IUQ4 282 aa17.19■□□□□ 0.34
CACNA1F-206ENST00000486943 SHISA4Q96DD7 197 aa17.19■□□□□ 0.34
CACNA1F-206ENST00000486943 PORCNQ9H237 461 aa17.19■□□□□ 0.34
CACNA1F-206ENST00000486943 VCPKMTQ9H867 229 aa17.19■□□□□ 0.34
CACNA1F-206ENST00000486943 ZNF287Q9HBT7 754 aa17.19■□□□□ 0.34
CACNA1F-206ENST00000486943 HOXC10Q9NYD6 342 aa17.19■□□□□ 0.34
CACNA1F-206ENST00000486943 COL11A1P12107 1806 aaPredicted RBP17.19■□□□□ 0.34
CACNA1F-206ENST00000486943 MINDY4BA8MYZ0 360 aa17.18■□□□□ 0.34
CACNA1F-206ENST00000486943 WDR46O15213 610 aaKnown RBP17.18■□□□□ 0.34
CACNA1F-206ENST00000486943 PEX10O60683 326 aa17.18■□□□□ 0.34
CACNA1F-206ENST00000486943 CNMDO75829 334 aa17.18■□□□□ 0.34
CACNA1F-206ENST00000486943 APPP05067 770 aa17.18■□□□□ 0.34
CACNA1F-206ENST00000486943 RASA1P20936 1047 aa17.18■□□□□ 0.34
CACNA1F-206ENST00000486943 COG2Q14746 738 aa17.18■□□□□ 0.34
CACNA1F-206ENST00000486943 GPR142Q7Z601 462 aa17.18■□□□□ 0.34
CACNA1F-206ENST00000486943 TRMT44Q8IYL2 757 aaKnown RBP17.18■□□□□ 0.34
CACNA1F-206ENST00000486943 IFNL3Q8IZI9 196 aa17.18■□□□□ 0.34
CACNA1F-206ENST00000486943 TANGO6Q9C0B7 1094 aa17.18■□□□□ 0.34
CACNA1F-206ENST00000486943 UNC93B1Q9H1C4 597 aa17.18■□□□□ 0.34
CACNA1F-206ENST00000486943 MKNK2Q9HBH9 465 aa17.18■□□□□ 0.34
CACNA1F-206ENST00000486943 EEF2P13639 858 aaKnown RBP17.17■□□□□ 0.34
CACNA1F-206ENST00000486943 PLEKHH3Q7Z736 793 aa17.17■□□□□ 0.34
CACNA1F-206ENST00000486943 MB21D1Q8N884 522 aa17.17■□□□□ 0.34
CACNA1F-206ENST00000486943 EXOC6Q8TAG9 804 aa17.17■□□□□ 0.34
CACNA1F-206ENST00000486943 U2AF1L4Q8WU68 220 aaKnown RBP17.17■□□□□ 0.34
CACNA1F-206ENST00000486943 USP6NLQ92738 828 aa17.17■□□□□ 0.34
CACNA1F-206ENST00000486943 SEC62Q99442 399 aaKnown RBP17.17■□□□□ 0.34
CACNA1F-206ENST00000486943 PAK6Q9NQU5 681 aaPredicted RBP17.17■□□□□ 0.34
CACNA1F-206ENST00000486943 MKI67P46013 3256 aaKnown RBP17.16■□□□□ 0.34
CACNA1F-206ENST00000486943 SGPL1O95470 568 aa17.16■□□□□ 0.34
CACNA1F-206ENST00000486943 RGS2P41220 211 aa17.16■□□□□ 0.34
CACNA1F-206ENST00000486943 KIAA1755Q5JYT7 1200 aa17.16■□□□□ 0.34
CACNA1F-206ENST00000486943 MORN1Q5T089 497 aa17.16■□□□□ 0.34
CACNA1F-206ENST00000486943 APBA2Q99767 749 aa17.16■□□□□ 0.34
CACNA1F-206ENST00000486943 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.16■□□□□ 0.34
CACNA1F-206ENST00000486943 LNPKQ9C0E8 428 aa17.16■□□□□ 0.34
CACNA1F-206ENST00000486943 NAPBQ9H115 298 aa17.16■□□□□ 0.34
CACNA1F-206ENST00000486943 CWC22Q9HCG8 908 aaKnown RBP17.16■□□□□ 0.34
CACNA1F-206ENST00000486943 GOPCQ9HD26 462 aa17.16■□□□□ 0.34
CACNA1F-206ENST00000486943 BTBD7Q9P203 1132 aa17.16■□□□□ 0.34
CACNA1F-206ENST00000486943 PLIN4Q96Q06 1357 aa17.15■□□□□ 0.34
CACNA1F-206ENST00000486943 SLC3A2P08195 630 aaKnown RBP17.15■□□□□ 0.34
CACNA1F-206ENST00000486943 CYP2B6P20813 491 aa17.15■□□□□ 0.34
CACNA1F-206ENST00000486943 DSG3P32926 999 aa17.15■□□□□ 0.34
CACNA1F-206ENST00000486943 TRIB2Q92519 343 aa17.15■□□□□ 0.34
CACNA1F-206ENST00000486943 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.15■□□□□ 0.34
CACNA1F-206ENST00000486943 HELLSQ9NRZ9 838 aa17.15■□□□□ 0.34
CACNA1F-206ENST00000486943 NYAP2Q9P242 653 aa17.15■□□□□ 0.34
CACNA1F-206ENST00000486943 SLC15A5A6NIM6 579 aa17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 FLOT1O75955 427 aa17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 ATP2B2Q01814 1243 aa17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 NUCB1Q02818 461 aa17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 PDE4BQ07343 736 aa17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 MAP2K5Q13163 448 aa17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 UBE2Q1Q7Z7E8 422 aa17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 CHD1LQ86WJ1 897 aa17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 SPICE1Q8N0Z3 855 aa17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 SHCBP1Q8NEM2 672 aa17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 OSBPL3Q9H4L5 887 aa17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 HMX1Q9NP08 348 aaPredicted RBP17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 SYNPO2Q9UMS6 1093 aa17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 SUPT16HQ9Y5B9 1047 aaKnown RBP17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 IVNS1ABPQ9Y6Y0 642 aa17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 RPTORQ8N122 1335 aa17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 FRMPD3Q5JV73 1810 aa17.14■□□□□ 0.33
CACNA1F-206ENST00000486943 IGKV6D-41A0A0C4DH26 115 aa17.13■□□□□ 0.33
CACNA1F-206ENST00000486943 IGHDP01880 384 aa17.13■□□□□ 0.33
CACNA1F-206ENST00000486943 ZKSCAN1P17029 563 aaPredicted RBP17.13■□□□□ 0.33
CACNA1F-206ENST00000486943 PTPREP23469 700 aa17.13■□□□□ 0.33
CACNA1F-206ENST00000486943 PPARAQ07869 468 aa17.13■□□□□ 0.33
CACNA1F-206ENST00000486943 MAP3K21Q5TCX8 1036 aa17.13■□□□□ 0.33
CACNA1F-206ENST00000486943 ZNF444Q8N0Y2 327 aaPredicted RBP17.13■□□□□ 0.33
CACNA1F-206ENST00000486943 DEFB118Q96PH6 123 aa17.13■□□□□ 0.33
CACNA1F-206ENST00000486943 SPATC1LQ9H0A9 340 aa17.13■□□□□ 0.33
CACNA1F-206ENST00000486943 CRISPLD2Q9H0B8 497 aa17.13■□□□□ 0.33
CACNA1F-206ENST00000486943 ZNFX1Q9P2E3 1918 aaKnown RBP17.13■□□□□ 0.33
CACNA1F-206ENST00000486943 HOXC6P09630 235 aa17.12■□□□□ 0.33
CACNA1F-206ENST00000486943 GRB14Q14449 540 aa17.12■□□□□ 0.33
CACNA1F-206ENST00000486943 WDR78Q5VTH9 848 aa17.12■□□□□ 0.33
CACNA1F-206ENST00000486943 B4GALNT3Q6L9W6 998 aa17.12■□□□□ 0.33
CACNA1F-206ENST00000486943 STK11IPQ8N1F8 1099 aa17.12■□□□□ 0.33
CACNA1F-206ENST00000486943 MOV10L1Q9BXT6 1211 aaKnown RBP17.12■□□□□ 0.33
CACNA1F-206ENST00000486943 ADAMTS5Q9UNA0 930 aa17.12■□□□□ 0.33
CACNA1F-206ENST00000486943 FOXP2O15409 715 aa17.11■□□□□ 0.33
CACNA1F-206ENST00000486943 STRNO43815 780 aa17.11■□□□□ 0.33
CACNA1F-206ENST00000486943 FARP2O94887 1054 aaPredicted RBP17.11■□□□□ 0.33
CACNA1F-206ENST00000486943 CCDC129Q6ZRS4 1044 aa17.11■□□□□ 0.33
CACNA1F-206ENST00000486943 NEDD1Q8NHV4 660 aa17.11■□□□□ 0.33
CACNA1F-206ENST00000486943 ATG4CQ96DT6 458 aa17.11■□□□□ 0.33
CACNA1F-206ENST00000486943 HTATIP2Q9BUP3 242 aa17.11■□□□□ 0.33
CACNA1F-206ENST00000486943 LAMA4Q16363 1823 aa17.1■□□□□ 0.33
CACNA1F-206ENST00000486943 PLXNA1Q9UIW2 1896 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms