RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 TFAP4Q01664 338 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 PTH1RQ03431 593 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 USP17L24Q0WX57 530 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 PKN2Q16513 984 aaKnown RBP15.61■□□□□ 0.09
SF1-216ENST00000486867 POTEEQ6S8J3 1075 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 GTF3C2Q8WUA4 911 aaPredicted RBP15.61■□□□□ 0.09
SF1-216ENST00000486867 MAP4K1Q92918 833 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 ESYT1Q9BSJ8 1104 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 INCENPQ9NQS7 918 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 TCP11L1Q9NUJ3 509 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 CPA4Q9UI42 421 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 MYPNQ86TC9 1320 aa15.61■□□□□ 0.09
SF1-216ENST00000486867 RBBP6Q7Z6E9 1792 aaKnown RBP15.6■□□□□ 0.09
SF1-216ENST00000486867 WDR46O15213 610 aaKnown RBP15.6■□□□□ 0.09
SF1-216ENST00000486867 GNRH1P01148 92 aa15.6■□□□□ 0.09
SF1-216ENST00000486867 TSPY3P0CV98 308 aa15.6■□□□□ 0.09
SF1-216ENST00000486867 TSPY8P0CW00 308 aa15.6■□□□□ 0.09
SF1-216ENST00000486867 HERVK_113P62684 666 aa15.6■□□□□ 0.09
SF1-216ENST00000486867 IRX3P78415 501 aaPredicted RBP15.6■□□□□ 0.09
SF1-216ENST00000486867 PPP4R3BQ5MIZ7 849 aa15.6■□□□□ 0.09
SF1-216ENST00000486867 OTOP1Q7RTM1 612 aa15.6■□□□□ 0.09
SF1-216ENST00000486867 STK11IPQ8N1F8 1099 aa15.6■□□□□ 0.09
SF1-216ENST00000486867 CD99L2Q8TCZ2 262 aa15.6■□□□□ 0.09
SF1-216ENST00000486867 P2RX7Q99572 595 aaKnown RBP15.6■□□□□ 0.09
SF1-216ENST00000486867 RNF41Q9H4P4 317 aaPredicted RBP15.6■□□□□ 0.09
SF1-216ENST00000486867 IL17RBQ9NRM6 502 aa15.6■□□□□ 0.09
SF1-216ENST00000486867 ZNF236Q9UL36 1845 aa15.59■□□□□ 0.09
SF1-216ENST00000486867 ZNF213O14771 459 aa15.59■□□□□ 0.09
SF1-216ENST00000486867 TTLL1O95922 423 aa15.59■□□□□ 0.09
SF1-216ENST00000486867 CTGFP29279 349 aa15.59■□□□□ 0.09
SF1-216ENST00000486867 HAND2P61296 217 aa15.59■□□□□ 0.09
SF1-216ENST00000486867 ZYXQ15942 572 aaKnown RBP15.59■□□□□ 0.09
SF1-216ENST00000486867 IMMTQ16891 758 aaKnown RBP15.59■□□□□ 0.09
SF1-216ENST00000486867 FAM47AQ5JRC9 791 aa15.59■□□□□ 0.09
SF1-216ENST00000486867 MFSD6Q6ZSS7 791 aa15.59■□□□□ 0.09
SF1-216ENST00000486867 GMCL1P1Q8NEA9 526 aa15.59■□□□□ 0.09
SF1-216ENST00000486867 SMCR8Q8TEV9 937 aaPredicted RBP15.59■□□□□ 0.09
SF1-216ENST00000486867 MCOLN1Q9GZU1 580 aa15.59■□□□□ 0.09
SF1-216ENST00000486867 RPAP3Q9H6T3 665 aaPredicted RBP15.59■□□□□ 0.09
SF1-216ENST00000486867 GOPCQ9HD26 462 aa15.59■□□□□ 0.09
SF1-216ENST00000486867 U3KPZ7 1027 aaPredicted RBP15.59■□□□□ 0.09
SF1-216ENST00000486867 ARHGEF6Q15052 776 aa15.58■□□□□ 0.08
SF1-216ENST00000486867 TNS4Q8IZW8 715 aa15.58■□□□□ 0.08
SF1-216ENST00000486867 NKX2-3Q8TAU0 364 aa15.58■□□□□ 0.08
SF1-216ENST00000486867 LSG1Q9H089 658 aaKnown RBP15.58■□□□□ 0.08
SF1-216ENST00000486867 ADAMTS5Q9UNA0 930 aa15.58■□□□□ 0.08
SF1-216ENST00000486867 NEDD4P46934 1319 aa15.58■□□□□ 0.08
SF1-216ENST00000486867 TSPY2A6NKD2 308 aa15.57■□□□□ 0.08
SF1-216ENST00000486867 SPDYE16A6NNV3 312 aaPredicted RBP15.57■□□□□ 0.08
SF1-216ENST00000486867 F5H6K3 240 aa15.57■□□□□ 0.08
SF1-216ENST00000486867 RANBP6O60518 1105 aaKnown RBP15.57■□□□□ 0.08
SF1-216ENST00000486867 CDC45O75419 566 aa15.57■□□□□ 0.08
SF1-216ENST00000486867 KLRC3Q07444 240 aa15.57■□□□□ 0.08
SF1-216ENST00000486867 RCSD1Q6JBY9 416 aa15.57■□□□□ 0.08
SF1-216ENST00000486867 FBXO46Q6PJ61 603 aaPredicted RBP15.57■□□□□ 0.08
SF1-216ENST00000486867 ANKRD13CQ8N6S4 541 aa15.57■□□□□ 0.08
SF1-216ENST00000486867 TRIM47Q96LD4 638 aa15.57■□□□□ 0.08
SF1-216ENST00000486867 ARHGAP39Q9C0H5 1083 aa15.57■□□□□ 0.08
SF1-216ENST00000486867 EFCC1Q9HA90 598 aa15.57■□□□□ 0.08
SF1-216ENST00000486867 TXNRD2Q9NNW7 524 aa15.57■□□□□ 0.08
SF1-216ENST00000486867 RBPJLQ9UBG7 517 aa15.57■□□□□ 0.08
SF1-216ENST00000486867 CLIP2Q9UDT6 1046 aa15.57■□□□□ 0.08
SF1-216ENST00000486867 RABGAP1Q9Y3P9 1069 aa15.57■□□□□ 0.08
SF1-216ENST00000486867 MYH6P13533 1939 aa15.56■□□□□ 0.08
SF1-216ENST00000486867 SMCHD1A6NHR9 2005 aa15.56■□□□□ 0.08
SF1-216ENST00000486867 CNMDO75829 334 aa15.56■□□□□ 0.08
SF1-216ENST00000486867 NDUFB10O96000 172 aa15.56■□□□□ 0.08
SF1-216ENST00000486867 CYP21A2P08686 494 aa15.56■□□□□ 0.08
SF1-216ENST00000486867 PRMT2P55345 433 aa15.56■□□□□ 0.08
SF1-216ENST00000486867 COG2Q14746 738 aa15.56■□□□□ 0.08
SF1-216ENST00000486867 KIF22Q14807 665 aa15.56■□□□□ 0.08
SF1-216ENST00000486867 ANKS1AQ92625 1134 aa15.56■□□□□ 0.08
SF1-216ENST00000486867 ESR2Q92731 530 aa15.56■□□□□ 0.08
SF1-216ENST00000486867 TTC14Q96N46 770 aa15.56■□□□□ 0.08
SF1-216ENST00000486867 CNNM2Q9H8M5 875 aa15.56■□□□□ 0.08
SF1-216ENST00000486867 TRIM17Q9Y577 477 aa15.56■□□□□ 0.08
SF1-216ENST00000486867 PLXNA1Q9UIW2 1896 aa15.55■□□□□ 0.08
SF1-216ENST00000486867 NMT2O60551 498 aa15.55■□□□□ 0.08
SF1-216ENST00000486867 DSG3P32926 999 aa15.55■□□□□ 0.08
SF1-216ENST00000486867 PSMC4P43686 418 aa15.55■□□□□ 0.08
SF1-216ENST00000486867 SPICE1Q8N0Z3 855 aa15.55■□□□□ 0.08
SF1-216ENST00000486867 GMCL1Q96IK5 515 aa15.55■□□□□ 0.08
SF1-216ENST00000486867 HOXC10Q9NYD6 342 aa15.55■□□□□ 0.08
SF1-216ENST00000486867 PTPN22Q9Y2R2 807 aa15.55■□□□□ 0.08
SF1-216ENST00000486867 RBM8AQ9Y5S9 174 aaKnown RBP15.55■□□□□ 0.08
SF1-216ENST00000486867 KIAA0100Q14667 2235 aaKnown RBP15.54■□□□□ 0.08
SF1-216ENST00000486867 FCGRTP55899 365 aa15.54■□□□□ 0.08
SF1-216ENST00000486867 ERVK-9P63128 1117 aa15.54■□□□□ 0.08
SF1-216ENST00000486867 ERVK-24P63145 666 aa15.54■□□□□ 0.08
SF1-216ENST00000486867 ATP2B2Q01814 1243 aa15.54■□□□□ 0.08
SF1-216ENST00000486867 NECTIN1Q15223 517 aa15.54■□□□□ 0.08
SF1-216ENST00000486867 MB21D1Q8N884 522 aa15.54■□□□□ 0.08
SF1-216ENST00000486867 GPRC5AQ8NFJ5 357 aa15.54■□□□□ 0.08
SF1-216ENST00000486867 KRT23Q9C075 422 aa15.54■□□□□ 0.08
SF1-216ENST00000486867 TANGO6Q9C0B7 1094 aa15.54■□□□□ 0.08
SF1-216ENST00000486867 B4E1Z4 1266 aa15.53■□□□□ 0.08
SF1-216ENST00000486867 PLA2G6O60733 806 aa15.53■□□□□ 0.08
SF1-216ENST00000486867 TOP1P11387 765 aaKnown RBP15.53■□□□□ 0.08
SF1-216ENST00000486867 CCDC178Q5BJE1 867 aa15.53■□□□□ 0.08
SF1-216ENST00000486867 RRP12Q5JTH9 1297 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms