RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 LAMA4Q16363 1823 aa15.38■□□□□ 0.05
CHMP3-208ENST00000486404 RLFQ13129 1914 aa15.37■□□□□ 0.05
CHMP3-208ENST00000486404 PATL2C9JE40 543 aaKnown RBP15.37■□□□□ 0.05
CHMP3-208ENST00000486404 IGHDP01880 384 aa15.37■□□□□ 0.05
CHMP3-208ENST00000486404 MAPK4P31152 587 aa15.37■□□□□ 0.05
CHMP3-208ENST00000486404 CCNA1P78396 465 aa15.37■□□□□ 0.05
CHMP3-208ENST00000486404 CATSPERGQ6ZRH7 1159 aa15.37■□□□□ 0.05
CHMP3-208ENST00000486404 IFNL3Q8IZI9 196 aa15.37■□□□□ 0.05
CHMP3-208ENST00000486404 RILPL2Q969X0 211 aa15.37■□□□□ 0.05
CHMP3-208ENST00000486404 KANSL2Q9H9L4 492 aa15.37■□□□□ 0.05
CHMP3-208ENST00000486404 GOPCQ9HD26 462 aa15.37■□□□□ 0.05
CHMP3-208ENST00000486404 TNRC18O15417 2968 aaPredicted RBP15.36■□□□□ 0.05
CHMP3-208ENST00000486404 A0A1W2PRG0 241 aa15.36■□□□□ 0.05
CHMP3-208ENST00000486404 ELNP15502 786 aa15.36■□□□□ 0.05
CHMP3-208ENST00000486404 PDE4BQ07343 736 aa15.36■□□□□ 0.05
CHMP3-208ENST00000486404 IRF5Q13568 498 aa15.36■□□□□ 0.05
CHMP3-208ENST00000486404 WDR78Q5VTH9 848 aa15.36■□□□□ 0.05
CHMP3-208ENST00000486404 CCDC129Q6ZRS4 1044 aa15.36■□□□□ 0.05
CHMP3-208ENST00000486404 SPICE1Q8N0Z3 855 aa15.36■□□□□ 0.05
CHMP3-208ENST00000486404 SOCS4Q8WXH5 440 aa15.36■□□□□ 0.05
CHMP3-208ENST00000486404 TXNRD2Q9NNW7 524 aa15.36■□□□□ 0.05
CHMP3-208ENST00000486404 RABGAP1Q9Y3P9 1069 aa15.36■□□□□ 0.05
CHMP3-208ENST00000486404 SPDYE16A6NNV3 312 aaPredicted RBP15.35■□□□□ 0.05
CHMP3-208ENST00000486404 PEX10O60683 326 aa15.35■□□□□ 0.05
CHMP3-208ENST00000486404 INHAP05111 366 aa15.35■□□□□ 0.05
CHMP3-208ENST00000486404 EEF2P13639 858 aaKnown RBP15.35■□□□□ 0.05
CHMP3-208ENST00000486404 RASA1P20936 1047 aa15.35■□□□□ 0.05
CHMP3-208ENST00000486404 SAMD1Q6SPF0 538 aaPredicted RBP15.35■□□□□ 0.05
CHMP3-208ENST00000486404 PXYLP1Q8TE99 480 aa15.35■□□□□ 0.05
CHMP3-208ENST00000486404 VCPKMTQ9H867 229 aa15.35■□□□□ 0.05
CHMP3-208ENST00000486404 HELLSQ9NRZ9 838 aa15.35■□□□□ 0.05
CHMP3-208ENST00000486404 RBPJLQ9UBG7 517 aa15.35■□□□□ 0.05
CHMP3-208ENST00000486404 TMX2Q9Y320 296 aa15.35■□□□□ 0.05
CHMP3-208ENST00000486404 ZNF236Q9UL36 1845 aa15.35■□□□□ 0.05
CHMP3-208ENST00000486404 WDR46O15213 610 aaKnown RBP15.34■□□□□ 0.05
CHMP3-208ENST00000486404 PRDM1O75626 825 aa15.34■□□□□ 0.05
CHMP3-208ENST00000486404 FLOT1O75955 427 aa15.34■□□□□ 0.05
CHMP3-208ENST00000486404 CCL5P13501 91 aa15.34■□□□□ 0.05
CHMP3-208ENST00000486404 EN2P19622 333 aaPredicted RBP15.34■□□□□ 0.05
CHMP3-208ENST00000486404 PPARAQ07869 468 aa15.34■□□□□ 0.05
CHMP3-208ENST00000486404 MTFR1Q15390 333 aa15.34■□□□□ 0.05
CHMP3-208ENST00000486404 ZNF444Q8N0Y2 327 aaPredicted RBP15.34■□□□□ 0.05
CHMP3-208ENST00000486404 NUDT12Q9BQG2 462 aa15.34■□□□□ 0.05
CHMP3-208ENST00000486404 RNF208Q9H0X6 261 aa15.34■□□□□ 0.05
CHMP3-208ENST00000486404 A0A0D9SFI3 127 aa15.33■□□□□ 0.04
CHMP3-208ENST00000486404 HMGCRP04035 888 aa15.33■□□□□ 0.04
CHMP3-208ENST00000486404 TSPY3P0CV98 308 aa15.33■□□□□ 0.04
CHMP3-208ENST00000486404 TSPY8P0CW00 308 aa15.33■□□□□ 0.04
CHMP3-208ENST00000486404 NMIQ13287 307 aaPredicted RBP15.33■□□□□ 0.04
CHMP3-208ENST00000486404 LBX2Q6XYB7 198 aa15.33■□□□□ 0.04
CHMP3-208ENST00000486404 GPR142Q7Z601 462 aa15.33■□□□□ 0.04
CHMP3-208ENST00000486404 PLEKHH3Q7Z736 793 aa15.33■□□□□ 0.04
CHMP3-208ENST00000486404 TICAM2Q86XR7 235 aa15.33■□□□□ 0.04
CHMP3-208ENST00000486404 PLEKHM2Q8IWE5 1019 aa15.33■□□□□ 0.04
CHMP3-208ENST00000486404 NKX2-3Q8TAU0 364 aa15.33■□□□□ 0.04
CHMP3-208ENST00000486404 FAM227BQ96M60 508 aa15.33■□□□□ 0.04
CHMP3-208ENST00000486404 PORCNQ9H237 461 aa15.33■□□□□ 0.04
CHMP3-208ENST00000486404 DIAPH3Q9NSV4 1193 aa15.33■□□□□ 0.04
CHMP3-208ENST00000486404 IVNS1ABPQ9Y6Y0 642 aa15.33■□□□□ 0.04
CHMP3-208ENST00000486404 PLIN4Q96Q06 1357 aa15.33■□□□□ 0.04
CHMP3-208ENST00000486404 ZKSCAN1P17029 563 aaPredicted RBP15.32■□□□□ 0.04
CHMP3-208ENST00000486404 RGS2P41220 211 aa15.32■□□□□ 0.04
CHMP3-208ENST00000486404 MFAP1P55081 439 aaKnown RBP15.32■□□□□ 0.04
CHMP3-208ENST00000486404 COG2Q14746 738 aa15.32■□□□□ 0.04
CHMP3-208ENST00000486404 MCMDC2Q4G0Z9 681 aa15.32■□□□□ 0.04
CHMP3-208ENST00000486404 MB21D1Q8N884 522 aa15.32■□□□□ 0.04
CHMP3-208ENST00000486404 UNC93B1Q9H1C4 597 aa15.32■□□□□ 0.04
CHMP3-208ENST00000486404 HOXC10Q9NYD6 342 aa15.32■□□□□ 0.04
CHMP3-208ENST00000486404 CCDC171Q6TFL3 1326 aa15.32■□□□□ 0.04
CHMP3-208ENST00000486404 FRMPD3Q5JV73 1810 aa15.31■□□□□ 0.04
CHMP3-208ENST00000486404 CNMDO75829 334 aa15.31■□□□□ 0.04
CHMP3-208ENST00000486404 CYP2B6P20813 491 aa15.31■□□□□ 0.04
CHMP3-208ENST00000486404 PLS1Q14651 629 aa15.31■□□□□ 0.04
CHMP3-208ENST00000486404 Q3C1V9 767 aa15.31■□□□□ 0.04
CHMP3-208ENST00000486404 KIAA1755Q5JYT7 1200 aa15.31■□□□□ 0.04
CHMP3-208ENST00000486404 SIAH1Q8IUQ4 282 aa15.31■□□□□ 0.04
CHMP3-208ENST00000486404 APBA2Q99767 749 aa15.31■□□□□ 0.04
CHMP3-208ENST00000486404 OSBPL3Q9H4L5 887 aa15.31■□□□□ 0.04
CHMP3-208ENST00000486404 BTBD7Q9P203 1132 aa15.31■□□□□ 0.04
CHMP3-208ENST00000486404 ISY1Q9ULR0 285 aaKnown RBP15.31■□□□□ 0.04
CHMP3-208ENST00000486404 HIP1O00291 1037 aa15.3■□□□□ 0.04
CHMP3-208ENST00000486404 GJB1P08034 283 aa15.3■□□□□ 0.04
CHMP3-208ENST00000486404 BRCA2P51587 3418 aa15.3■□□□□ 0.04
CHMP3-208ENST00000486404 CTDSPL2Q05D32 466 aa15.3■□□□□ 0.04
CHMP3-208ENST00000486404 PPP4R3BQ5MIZ7 849 aa15.3■□□□□ 0.04
CHMP3-208ENST00000486404 FAM83BQ5T0W9 1011 aa15.3■□□□□ 0.04
CHMP3-208ENST00000486404 VPS53Q5VIR6 699 aa15.3■□□□□ 0.04
CHMP3-208ENST00000486404 TRMT44Q8IYL2 757 aaKnown RBP15.3■□□□□ 0.04
CHMP3-208ENST00000486404 ATG4CQ96DT6 458 aa15.3■□□□□ 0.04
CHMP3-208ENST00000486404 CEP95Q96GE4 821 aa15.3■□□□□ 0.04
CHMP3-208ENST00000486404 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.3■□□□□ 0.04
CHMP3-208ENST00000486404 TOMM22Q9NS69 142 aa15.3■□□□□ 0.04
CHMP3-208ENST00000486404 NYAP2Q9P242 653 aa15.3■□□□□ 0.04
CHMP3-208ENST00000486404 PLXNA1Q9UIW2 1896 aa15.3■□□□□ 0.04
CHMP3-208ENST00000486404 ZMYM6O95789 1325 aa15.29■□□□□ 0.04
CHMP3-208ENST00000486404 TSPY2A6NKD2 308 aa15.29■□□□□ 0.04
CHMP3-208ENST00000486404 TTLL1O95922 423 aa15.29■□□□□ 0.04
CHMP3-208ENST00000486404 SDSP20132 328 aa15.29■□□□□ 0.04
CHMP3-208ENST00000486404 DSG3P32926 999 aa15.29■□□□□ 0.04
CHMP3-208ENST00000486404 FAM47AQ5JRC9 791 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms