RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 ZNF287Q9HBT7 754 aa13.16□□□□□ -0.3
SNX21-211ENST00000486336 HELLSQ9NRZ9 838 aa13.16□□□□□ -0.3
SNX21-211ENST00000486336 RASA1P20936 1047 aa13.15□□□□□ -0.3
SNX21-211ENST00000486336 NMIQ13287 307 aaPredicted RBP13.15□□□□□ -0.3
SNX21-211ENST00000486336 MCMDC2Q4G0Z9 681 aa13.15□□□□□ -0.3
SNX21-211ENST00000486336 KIAA1755Q5JYT7 1200 aa13.15□□□□□ -0.3
SNX21-211ENST00000486336 SLAIN1Q8ND83 568 aa13.15□□□□□ -0.3
SNX21-211ENST00000486336 VCPKMTQ9H867 229 aa13.15□□□□□ -0.3
SNX21-211ENST00000486336 TMX2Q9Y320 296 aa13.15□□□□□ -0.3
SNX21-211ENST00000486336 RABGAP1Q9Y3P9 1069 aa13.15□□□□□ -0.3
SNX21-211ENST00000486336 A0A0D9SFI3 127 aa13.14□□□□□ -0.31
SNX21-211ENST00000486336 CYP2B6P20813 491 aa13.14□□□□□ -0.31
SNX21-211ENST00000486336 MAPK4P31152 587 aa13.14□□□□□ -0.31
SNX21-211ENST00000486336 CCNA1P78396 465 aa13.14□□□□□ -0.31
SNX21-211ENST00000486336 CTDSPL2Q05D32 466 aa13.14□□□□□ -0.31
SNX21-211ENST00000486336 PDE4BQ07343 736 aa13.14□□□□□ -0.31
SNX21-211ENST00000486336 PPARAQ07869 468 aa13.14□□□□□ -0.31
SNX21-211ENST00000486336 COG2Q14746 738 aa13.14□□□□□ -0.31
SNX21-211ENST00000486336 VPS53Q5VIR6 699 aa13.14□□□□□ -0.31
SNX21-211ENST00000486336 RNF208Q9H0X6 261 aa13.14□□□□□ -0.31
SNX21-211ENST00000486336 PORCNQ9H237 461 aa13.14□□□□□ -0.31
SNX21-211ENST00000486336 GOPCQ9HD26 462 aa13.14□□□□□ -0.31
SNX21-211ENST00000486336 HOXC10Q9NYD6 342 aa13.14□□□□□ -0.31
SNX21-211ENST00000486336 DOCK3Q8IZD9 2030 aa13.13□□□□□ -0.31
SNX21-211ENST00000486336 SPDYE16A6NNV3 312 aaPredicted RBP13.13□□□□□ -0.31
SNX21-211ENST00000486336 CNMDO75829 334 aa13.13□□□□□ -0.31
SNX21-211ENST00000486336 FLOT1O75955 427 aa13.13□□□□□ -0.31
SNX21-211ENST00000486336 TSPY3P0CV98 308 aa13.13□□□□□ -0.31
SNX21-211ENST00000486336 TSPY8P0CW00 308 aa13.13□□□□□ -0.31
SNX21-211ENST00000486336 CCL5P13501 91 aa13.13□□□□□ -0.31
SNX21-211ENST00000486336 SDSP20132 328 aa13.13□□□□□ -0.31
SNX21-211ENST00000486336 IRF5Q13568 498 aa13.13□□□□□ -0.31
SNX21-211ENST00000486336 PLS1Q14651 629 aa13.13□□□□□ -0.31
SNX21-211ENST00000486336 FAM47AQ5JRC9 791 aa13.13□□□□□ -0.31
SNX21-211ENST00000486336 POTEEQ6S8J3 1075 aa13.13□□□□□ -0.31
SNX21-211ENST00000486336 PLEKHH3Q7Z736 793 aa13.13□□□□□ -0.31
SNX21-211ENST00000486336 LPAR1Q92633 364 aa13.13□□□□□ -0.31
SNX21-211ENST00000486336 NUDT12Q9BQG2 462 aa13.13□□□□□ -0.31
SNX21-211ENST00000486336 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.13□□□□□ -0.31
SNX21-211ENST00000486336 BTBD7Q9P203 1132 aa13.13□□□□□ -0.31
SNX21-211ENST00000486336 CLIP2Q9UDT6 1046 aa13.13□□□□□ -0.31
SNX21-211ENST00000486336 KIAA0100Q14667 2235 aaKnown RBP13.13□□□□□ -0.31
SNX21-211ENST00000486336 ROBO3Q96MS0 1386 aa13.12□□□□□ -0.31
SNX21-211ENST00000486336 INHAP05111 366 aa13.12□□□□□ -0.31
SNX21-211ENST00000486336 DSG3P32926 999 aa13.12□□□□□ -0.31
SNX21-211ENST00000486336 TFAP4Q01664 338 aa13.12□□□□□ -0.31
SNX21-211ENST00000486336 GPR142Q7Z601 462 aa13.12□□□□□ -0.31
SNX21-211ENST00000486336 PXYLP1Q8TE99 480 aa13.12□□□□□ -0.31
SNX21-211ENST00000486336 UNC93B1Q9H1C4 597 aa13.12□□□□□ -0.31
SNX21-211ENST00000486336 OSBPL3Q9H4L5 887 aa13.12□□□□□ -0.31
SNX21-211ENST00000486336 INCENPQ9NQS7 918 aa13.12□□□□□ -0.31
SNX21-211ENST00000486336 TOMM22Q9NS69 142 aa13.12□□□□□ -0.31
SNX21-211ENST00000486336 DIAPH3Q9NSV4 1193 aa13.12□□□□□ -0.31
SNX21-211ENST00000486336 GJD2Q9UKL4 321 aa13.12□□□□□ -0.31
SNX21-211ENST00000486336 WDR46O15213 610 aaKnown RBP13.11□□□□□ -0.31
SNX21-211ENST00000486336 FAM83BQ5T0W9 1011 aa13.11□□□□□ -0.31
SNX21-211ENST00000486336 CWC27Q6UX04 472 aaKnown RBP13.11□□□□□ -0.31
SNX21-211ENST00000486336 ZNF589Q86UQ0 364 aaPredicted RBP13.11□□□□□ -0.31
SNX21-211ENST00000486336 ATG4CQ96DT6 458 aa13.11□□□□□ -0.31
SNX21-211ENST00000486336 NYAP2Q9P242 653 aa13.11□□□□□ -0.31
SNX21-211ENST00000486336 ISY1Q9ULR0 285 aaKnown RBP13.11□□□□□ -0.31
SNX21-211ENST00000486336 IVNS1ABPQ9Y6Y0 642 aa13.11□□□□□ -0.31
SNX21-211ENST00000486336 HTTP42858 3142 aa13.11□□□□□ -0.31
SNX21-211ENST00000486336 TSPY2A6NKD2 308 aa13.1□□□□□ -0.31
SNX21-211ENST00000486336 FOXP2O15409 715 aa13.1□□□□□ -0.31
SNX21-211ENST00000486336 RANBP6O60518 1105 aaKnown RBP13.1□□□□□ -0.31
SNX21-211ENST00000486336 FGAP02671 866 aa13.1□□□□□ -0.31
SNX21-211ENST00000486336 HSPD1P10809 573 aaKnown RBP13.1□□□□□ -0.31
SNX21-211ENST00000486336 PDE4AP27815 886 aa13.1□□□□□ -0.31
SNX21-211ENST00000486336 RGS2P41220 211 aa13.1□□□□□ -0.31
SNX21-211ENST00000486336 MFAP1P55081 439 aaKnown RBP13.1□□□□□ -0.31
SNX21-211ENST00000486336 RRP12Q5JTH9 1297 aaKnown RBP13.1□□□□□ -0.31
SNX21-211ENST00000486336 LBX2Q6XYB7 198 aa13.1□□□□□ -0.31
SNX21-211ENST00000486336 TICAM2Q86XR7 235 aa13.1□□□□□ -0.31
SNX21-211ENST00000486336 NEDD1Q8NHV4 660 aa13.1□□□□□ -0.31
SNX21-211ENST00000486336 SOCS4Q8WXH5 440 aa13.1□□□□□ -0.31
SNX21-211ENST00000486336 CHMP4CQ96CF2 233 aa13.1□□□□□ -0.31
SNX21-211ENST00000486336 CEP95Q96GE4 821 aa13.1□□□□□ -0.31
SNX21-211ENST00000486336 NUP88Q99567 741 aaPredicted RBP13.1□□□□□ -0.31
SNX21-211ENST00000486336 CCDC171Q6TFL3 1326 aa13.1□□□□□ -0.31
SNX21-211ENST00000486336 F5H6K3 240 aa13.09□□□□□ -0.31
SNX21-211ENST00000486336 HIP1O00291 1037 aa13.09□□□□□ -0.31
SNX21-211ENST00000486336 TTLL1O95922 423 aa13.09□□□□□ -0.31
SNX21-211ENST00000486336 TFRCP02786 760 aaKnown RBP13.09□□□□□ -0.31
SNX21-211ENST00000486336 HMGCRP04035 888 aa13.09□□□□□ -0.31
SNX21-211ENST00000486336 HAND2P61296 217 aa13.09□□□□□ -0.31
SNX21-211ENST00000486336 KLRC3Q07444 240 aa13.09□□□□□ -0.31
SNX21-211ENST00000486336 TRIM32Q13049 653 aa13.09□□□□□ -0.31
SNX21-211ENST00000486336 ALX1Q15699 326 aa13.09□□□□□ -0.31
SNX21-211ENST00000486336 MORN1Q5T089 497 aa13.09□□□□□ -0.31
SNX21-211ENST00000486336 NCAPG2Q86XI2 1143 aa13.09□□□□□ -0.31
SNX21-211ENST00000486336 LRRC47Q8N1G4 583 aaKnown RBP13.09□□□□□ -0.31
SNX21-211ENST00000486336 NKX2-3Q8TAU0 364 aa13.09□□□□□ -0.31
SNX21-211ENST00000486336 MOV10L1Q9BXT6 1211 aaKnown RBP13.09□□□□□ -0.31
SNX21-211ENST00000486336 SPATC1LQ9H0A9 340 aa13.09□□□□□ -0.31
SNX21-211ENST00000486336 FBXO28Q9NVF7 368 aa13.09□□□□□ -0.31
SNX21-211ENST00000486336 MTMR4Q9NYA4 1195 aa13.09□□□□□ -0.31
SNX21-211ENST00000486336 CTDP1Q9Y5B0 961 aaPredicted RBP13.09□□□□□ -0.31
SNX21-211ENST00000486336 IGKV6D-41A0A0C4DH26 115 aa13.08□□□□□ -0.32
SNX21-211ENST00000486336 SLC15A5A6NIM6 579 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms