RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 USP17L17D6RBQ6 530 aa25.14■■□□□ 1.62
LMBR1-217ENST00000485985 USP17L19D6RCP7 530 aa25.14■■□□□ 1.62
LMBR1-217ENST00000485985 USP17L20D6RJB6 530 aa25.14■■□□□ 1.62
LMBR1-217ENST00000485985 MPHOSPH10O00566 681 aaKnown RBP25.14■■□□□ 1.62
LMBR1-217ENST00000485985 USP17L24Q0WX57 530 aa25.14■■□□□ 1.62
LMBR1-217ENST00000485985 LHX8Q68G74 356 aa25.14■■□□□ 1.62
LMBR1-217ENST00000485985 ATP8A2Q9NTI2 1148 aa25.14■■□□□ 1.62
LMBR1-217ENST00000485985 RABGAP1Q9Y3P9 1069 aa25.14■■□□□ 1.62
LMBR1-217ENST00000485985 CNMDO75829 334 aa25.13■■□□□ 1.61
LMBR1-217ENST00000485985 COL6A1P12109 1028 aa25.13■■□□□ 1.61
LMBR1-217ENST00000485985 CCND3P30281 292 aaPredicted RBP25.13■■□□□ 1.61
LMBR1-217ENST00000485985 CLEC10AQ8IUN9 316 aa25.13■■□□□ 1.61
LMBR1-217ENST00000485985 APBA2Q99767 749 aa25.13■■□□□ 1.61
LMBR1-217ENST00000485985 SWAP70Q9UH65 585 aa25.13■■□□□ 1.61
LMBR1-217ENST00000485985 MAGEA10P43363 369 aaPredicted RBP25.12■■□□□ 1.61
LMBR1-217ENST00000485985 RRP1P56182 461 aaKnown RBP25.12■■□□□ 1.61
LMBR1-217ENST00000485985 MAP2K5Q13163 448 aa25.12■■□□□ 1.61
LMBR1-217ENST00000485985 CATSPERGQ6ZRH7 1159 aa25.12■■□□□ 1.61
LMBR1-217ENST00000485985 RPAP3Q9H6T3 665 aaPredicted RBP25.12■■□□□ 1.61
LMBR1-217ENST00000485985 CWC22Q9HCG8 908 aaKnown RBP25.12■■□□□ 1.61
LMBR1-217ENST00000485985 AKR1B1P15121 316 aa25.11■■□□□ 1.61
LMBR1-217ENST00000485985 CCNA1P78396 465 aa25.11■■□□□ 1.61
LMBR1-217ENST00000485985 C12orf60Q5U649 245 aa25.11■■□□□ 1.61
LMBR1-217ENST00000485985 ZSCAN25Q6NSZ9 544 aa25.11■■□□□ 1.61
LMBR1-217ENST00000485985 SLC17A8Q8NDX2 589 aa25.11■■□□□ 1.61
LMBR1-217ENST00000485985 SLC4A4Q9Y6R1 1079 aa25.11■■□□□ 1.61
LMBR1-217ENST00000485985 ZNF236Q9UL36 1845 aa25.11■■□□□ 1.61
LMBR1-217ENST00000485985 USP17L12C9JPN9 530 aa25.1■■□□□ 1.61
LMBR1-217ENST00000485985 USP17L21D6R901 530 aa25.1■■□□□ 1.61
LMBR1-217ENST00000485985 GLRX3O76003 335 aaKnown RBP25.1■■□□□ 1.61
LMBR1-217ENST00000485985 GPR153Q6NV75 609 aa25.1■■□□□ 1.61
LMBR1-217ENST00000485985 TMEM179Q6ZVK1 233 aa25.1■■□□□ 1.61
LMBR1-217ENST00000485985 KBTBD3Q8NAB2 608 aa25.1■■□□□ 1.61
LMBR1-217ENST00000485985 GPATCH3Q96I76 525 aa25.1■■□□□ 1.61
LMBR1-217ENST00000485985 MYH4Q9Y623 1939 aa25.1■■□□□ 1.61
LMBR1-217ENST00000485985 SPDYE16A6NNV3 312 aaPredicted RBP25.09■■□□□ 1.61
LMBR1-217ENST00000485985 KIAA1755Q5JYT7 1200 aa25.09■■□□□ 1.61
LMBR1-217ENST00000485985 LBX2Q6XYB7 198 aa25.09■■□□□ 1.61
LMBR1-217ENST00000485985 BTBD7Q9P203 1132 aa25.09■■□□□ 1.61
LMBR1-217ENST00000485985 CDK8P49336 464 aa25.08■■□□□ 1.61
LMBR1-217ENST00000485985 LRIT3Q3SXY7 679 aa25.08■■□□□ 1.61
LMBR1-217ENST00000485985 CTR9Q6PD62 1173 aa25.08■■□□□ 1.61
LMBR1-217ENST00000485985 C16orf86Q6ZW13 317 aa25.08■■□□□ 1.61
LMBR1-217ENST00000485985 SIAH1Q8IUQ4 282 aa25.08■■□□□ 1.61
LMBR1-217ENST00000485985 TDHQ8IZJ6 230 aa25.08■■□□□ 1.61
LMBR1-217ENST00000485985 OTUD7AQ8TE49 926 aaPredicted RBP25.08■■□□□ 1.61
LMBR1-217ENST00000485985 SLC15A5A6NIM6 579 aa25.07■■□□□ 1.6
LMBR1-217ENST00000485985 PTPREP23469 700 aa25.07■■□□□ 1.6
LMBR1-217ENST00000485985 WDR78Q5VTH9 848 aa25.07■■□□□ 1.6
LMBR1-217ENST00000485985 OSBP2Q969R2 916 aa25.07■■□□□ 1.6
LMBR1-217ENST00000485985 STRBPQ96SI9 672 aaKnown RBP25.07■■□□□ 1.6
LMBR1-217ENST00000485985 UBE2OQ9C0C9 1292 aaKnown RBP25.07■■□□□ 1.6
LMBR1-217ENST00000485985 FLRT1Q9NZU1 646 aa25.07■■□□□ 1.6
LMBR1-217ENST00000485985 ICA1Q05084 483 aa25.06■■□□□ 1.6
LMBR1-217ENST00000485985 LRRC26Q2I0M4 334 aa25.06■■□□□ 1.6
LMBR1-217ENST00000485985 MFSD14CQ5VZR4 134 aa25.06■■□□□ 1.6
LMBR1-217ENST00000485985 ZNFX1Q9P2E3 1918 aaKnown RBP25.06■■□□□ 1.6
LMBR1-217ENST00000485985 AMOTL1Q8IY63 956 aa25.05■■□□□ 1.6
LMBR1-217ENST00000485985 DEFB123Q8N688 67 aa25.05■■□□□ 1.6
LMBR1-217ENST00000485985 PI4K2BQ8TCG2 481 aa25.05■■□□□ 1.6
LMBR1-217ENST00000485985 APPBP2Q92624 585 aa25.05■■□□□ 1.6
LMBR1-217ENST00000485985 DDRGK1Q96HY6 314 aa25.05■■□□□ 1.6
LMBR1-217ENST00000485985 TANGO6Q9C0B7 1094 aa25.05■■□□□ 1.6
LMBR1-217ENST00000485985 ARPP21Q9UBL0 812 aaPredicted RBP25.05■■□□□ 1.6
LMBR1-217ENST00000485985 GSG1L2A8MUP6 293 aa25.04■■□□□ 1.6
LMBR1-217ENST00000485985 HOXC6P09630 235 aa25.04■■□□□ 1.6
LMBR1-217ENST00000485985 CCDC17Q96LX7 622 aa25.04■■□□□ 1.6
LMBR1-217ENST00000485985 CRBNQ96SW2 442 aa25.04■■□□□ 1.6
LMBR1-217ENST00000485985 IVNS1ABPQ9Y6Y0 642 aa25.04■■□□□ 1.6
LMBR1-217ENST00000485985 TTC41PQ6P2S7 1318 aa25.04■■□□□ 1.6
LMBR1-217ENST00000485985 ROBO3Q96MS0 1386 aa25.04■■□□□ 1.6
LMBR1-217ENST00000485985 M0R2C6 588 aa25.03■■□□□ 1.6
LMBR1-217ENST00000485985 DLL1O00548 723 aa25.03■■□□□ 1.6
LMBR1-217ENST00000485985 RNF113AO15541 343 aaKnown RBP25.03■■□□□ 1.6
LMBR1-217ENST00000485985 ATP2B2Q01814 1243 aa25.03■■□□□ 1.6
LMBR1-217ENST00000485985 GRB14Q14449 540 aa25.03■■□□□ 1.6
LMBR1-217ENST00000485985 SPICE1Q8N0Z3 855 aa25.03■■□□□ 1.6
LMBR1-217ENST00000485985 ARHGEF10LQ9HCE6 1279 aa25.03■■□□□ 1.6
LMBR1-217ENST00000485985 EPB41L4AQ9HCS5 686 aaPredicted RBP25.03■■□□□ 1.6
LMBR1-217ENST00000485985 TMX2Q9Y320 296 aa25.03■■□□□ 1.6
LMBR1-217ENST00000485985 Q7L0L9 218 aa25.02■■□□□ 1.6
LMBR1-217ENST00000485985 NPLOC4Q8TAT6 608 aa25.02■■□□□ 1.6
LMBR1-217ENST00000485985 VCPKMTQ9H867 229 aa25.02■■□□□ 1.6
LMBR1-217ENST00000485985 DDX20Q9UHI6 824 aaKnown RBP25.02■■□□□ 1.6
LMBR1-217ENST00000485985 SALL3Q9BXA9 1300 aa25.02■■□□□ 1.6
LMBR1-217ENST00000485985 PLXNA1Q9UIW2 1896 aa25.01■■□□□ 1.59
LMBR1-217ENST00000485985 COL6A3P12111 3177 aa25.01■■□□□ 1.59
LMBR1-217ENST00000485985 GPAA1O43292 621 aa25.01■■□□□ 1.59
LMBR1-217ENST00000485985 COG2Q14746 738 aa25.01■■□□□ 1.59
LMBR1-217ENST00000485985 SBK1Q52WX2 424 aa25.01■■□□□ 1.59
LMBR1-217ENST00000485985 LPAR1Q92633 364 aa25.01■■□□□ 1.59
LMBR1-217ENST00000485985 SENP6Q9GZR1 1112 aaPredicted RBP25.01■■□□□ 1.59
LMBR1-217ENST00000485985 MSCO60682 206 aa25■■□□□ 1.59
LMBR1-217ENST00000485985 ZFYP08048 801 aaPredicted RBP25■■□□□ 1.59
LMBR1-217ENST00000485985 EEF2P13639 858 aaKnown RBP25■■□□□ 1.59
LMBR1-217ENST00000485985 CNGA1P29973 690 aa25■■□□□ 1.59
LMBR1-217ENST00000485985 CYP2C19P33261 490 aa25■■□□□ 1.59
LMBR1-217ENST00000485985 MDM2Q00987 491 aaPredicted RBP25■■□□□ 1.59
LMBR1-217ENST00000485985 GNL3Q9BVP2 549 aaKnown RBP eCLIP25■■□□□ 1.59
LMBR1-217ENST00000485985 HOXC10Q9NYD6 342 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms