RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 XAGE3Q8WTP9 111 aa6.14□□□□□ -1.43
XPA-203ENST00000485042 LRP2BPQ9P2M1 347 aa6.14□□□□□ -1.43
XPA-203ENST00000485042 HMGXB3Q12766 1538 aa6.14□□□□□ -1.43
XPA-203ENST00000485042 ANKRD34BA5PLL1 514 aa6.13□□□□□ -1.43
XPA-203ENST00000485042 ADCY3O60266 1144 aa6.13□□□□□ -1.43
XPA-203ENST00000485042 NEFMP07197 916 aa6.13□□□□□ -1.43
XPA-203ENST00000485042 ASPAP45381 313 aa6.13□□□□□ -1.43
XPA-203ENST00000485042 ZNF143P52747 638 aaPredicted RBP6.13□□□□□ -1.43
XPA-203ENST00000485042 SLBPQ14493 270 aaKnown RBP eCLIP6.13□□□□□ -1.43
XPA-203ENST00000485042 DALRD3Q5D0E6 543 aaKnown RBP6.13□□□□□ -1.43
XPA-203ENST00000485042 ZC3H12BQ5HYM0 836 aaKnown RBP6.13□□□□□ -1.43
XPA-203ENST00000485042 HEATR6Q6AI08 1181 aaKnown RBP6.13□□□□□ -1.43
XPA-203ENST00000485042 PPFIBP1Q86W92 1011 aa6.13□□□□□ -1.43
XPA-203ENST00000485042 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.13□□□□□ -1.43
XPA-203ENST00000485042 CYB5D2Q8WUJ1 264 aa6.13□□□□□ -1.43
XPA-203ENST00000485042 ISL2Q96A47 359 aa6.13□□□□□ -1.43
XPA-203ENST00000485042 SGSM3Q96HU1 749 aa6.13□□□□□ -1.43
XPA-203ENST00000485042 IPO9Q96P70 1041 aaKnown RBP6.13□□□□□ -1.43
XPA-203ENST00000485042 CDC6Q99741 560 aa6.13□□□□□ -1.43
XPA-203ENST00000485042 HAUS7Q99871 368 aa6.13□□□□□ -1.43
XPA-203ENST00000485042 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.13□□□□□ -1.43
XPA-203ENST00000485042 SUGCTQ9HAC7 445 aa6.13□□□□□ -1.43
XPA-203ENST00000485042 PLAAQ9Y263 795 aa6.13□□□□□ -1.43
XPA-203ENST00000485042 SPDYE3A6NKU9 549 aa6.12□□□□□ -1.43
XPA-203ENST00000485042 C9IYK1 514 aa6.12□□□□□ -1.43
XPA-203ENST00000485042 CST3P01034 146 aaPredicted RBP6.12□□□□□ -1.43
XPA-203ENST00000485042 EPHX1P07099 455 aa6.12□□□□□ -1.43
XPA-203ENST00000485042 TRIM28Q13263 835 aaKnown RBP6.12□□□□□ -1.43
XPA-203ENST00000485042 UBE3DQ7Z6J8 389 aa6.12□□□□□ -1.43
XPA-203ENST00000485042 ADAT2Q7Z6V5 191 aaKnown RBP6.12□□□□□ -1.43
XPA-203ENST00000485042 CCDC144CPQ8IYA2 1237 aa6.12□□□□□ -1.43
XPA-203ENST00000485042 SMARCC1Q92922 1105 aaPredicted RBP6.12□□□□□ -1.43
XPA-203ENST00000485042 ZNF512BQ96KM6 892 aaPredicted RBP6.12□□□□□ -1.43
XPA-203ENST00000485042 PLVAPQ9BX97 442 aa6.12□□□□□ -1.43
XPA-203ENST00000485042 MRPL18Q9H0U6 180 aaKnown RBP6.12□□□□□ -1.43
XPA-203ENST00000485042 CCDC163A0A0D9SF12 145 aa6.11□□□□□ -1.43
XPA-203ENST00000485042 A0A1W2PQU0 124 aa6.11□□□□□ -1.43
XPA-203ENST00000485042 L1CAMP32004 1257 aa6.11□□□□□ -1.43
XPA-203ENST00000485042 CAP2P40123 477 aa6.11□□□□□ -1.43
XPA-203ENST00000485042 AMPD3Q01432 767 aa6.11□□□□□ -1.43
XPA-203ENST00000485042 HSP90AA2PQ14568 343 aaPredicted RBP6.11□□□□□ -1.43
XPA-203ENST00000485042 AXDND1Q5T1B0 1012 aaPredicted RBP6.11□□□□□ -1.43
XPA-203ENST00000485042 IGF2-ASQ6U949 168 aa6.11□□□□□ -1.43
XPA-203ENST00000485042 DHX37Q8IY37 1157 aaKnown RBP6.11□□□□□ -1.43
XPA-203ENST00000485042 SMYD4Q8IYR2 804 aaPredicted RBP6.11□□□□□ -1.43
XPA-203ENST00000485042 LRRN4CLQ8ND94 238 aa6.11□□□□□ -1.43
XPA-203ENST00000485042 TRIM11Q96F44 468 aa6.11□□□□□ -1.43
XPA-203ENST00000485042 FGD4Q96M96 766 aa6.11□□□□□ -1.43
XPA-203ENST00000485042 FOXQ1Q9C009 403 aa6.11□□□□□ -1.43
XPA-203ENST00000485042 MKRN2Q9H000 416 aaKnown RBP6.11□□□□□ -1.43
XPA-203ENST00000485042 GBP3Q9H0R5 595 aa6.11□□□□□ -1.43
XPA-203ENST00000485042 PCOLCE2Q9UKZ9 415 aa6.11□□□□□ -1.43
XPA-203ENST00000485042 ACTL7BQ9Y614 415 aa6.11□□□□□ -1.43
XPA-203ENST00000485042 LAMC3Q9Y6N6 1575 aa6.1□□□□□ -1.43
XPA-203ENST00000485042 BAZ1BQ9UIG0 1483 aaKnown RBP6.1□□□□□ -1.43
XPA-203ENST00000485042 TRAV20A0A0B4J274 112 aa6.1□□□□□ -1.43
XPA-203ENST00000485042 FAM229AH3BQW9 127 aa6.1□□□□□ -1.43
XPA-203ENST00000485042 TIAF1O95411 115 aa6.1□□□□□ -1.43
XPA-203ENST00000485042 HOXB4P17483 251 aaPredicted RBP6.1□□□□□ -1.43
XPA-203ENST00000485042 CNGA1P29973 690 aa6.1□□□□□ -1.43
XPA-203ENST00000485042 CBX2Q14781 532 aaPredicted RBP6.1□□□□□ -1.43
XPA-203ENST00000485042 FOXB2Q5VYV0 432 aa6.1□□□□□ -1.43
XPA-203ENST00000485042 DCAF15Q66K64 600 aa6.1□□□□□ -1.43
XPA-203ENST00000485042 ANKRD34AQ69YU3 496 aa6.1□□□□□ -1.43
XPA-203ENST00000485042 ARMCX6Q7L4S7 300 aa6.1□□□□□ -1.43
XPA-203ENST00000485042 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.1□□□□□ -1.43
XPA-203ENST00000485042 ALYREFQ86V81 257 aaKnown RBP6.1□□□□□ -1.43
XPA-203ENST00000485042 NIM1KQ8IY84 436 aa6.1□□□□□ -1.43
XPA-203ENST00000485042 C2CD4AQ8NCU7 369 aaPredicted RBP6.1□□□□□ -1.43
XPA-203ENST00000485042 NINJ1Q92982 152 aa6.1□□□□□ -1.43
XPA-203ENST00000485042 MFSD3Q96ES6 412 aa6.1□□□□□ -1.43
XPA-203ENST00000485042 AARSD1Q9BTE6 412 aaKnown RBP6.1□□□□□ -1.43
XPA-203ENST00000485042 METTL14Q9HCE5 456 aaKnown RBP6.1□□□□□ -1.43
XPA-203ENST00000485042 ARHGEF4Q9NR80 690 aa6.1□□□□□ -1.43
XPA-203ENST00000485042 FAM105AQ9NUU6 356 aa6.1□□□□□ -1.43
XPA-203ENST00000485042 SUSD2Q9UGT4 822 aa6.1□□□□□ -1.43
XPA-203ENST00000485042 SUGT1Q9Y2Z0 365 aa6.1□□□□□ -1.43
XPA-203ENST00000485042 IRS4O14654 1257 aaPredicted RBP6.09□□□□□ -1.43
XPA-203ENST00000485042 PPM1BO75688 479 aa6.09□□□□□ -1.43
XPA-203ENST00000485042 LRIG2O94898 1065 aa6.09□□□□□ -1.43
XPA-203ENST00000485042 MYCLP1P12525 358 aaPredicted RBP6.09□□□□□ -1.43
XPA-203ENST00000485042 ELNP15502 786 aa6.09□□□□□ -1.43
XPA-203ENST00000485042 RAB6AP20340 208 aa6.09□□□□□ -1.43
XPA-203ENST00000485042 USP11P51784 963 aa6.09□□□□□ -1.43
XPA-203ENST00000485042 PPP2R2AP63151 447 aa6.09□□□□□ -1.43
XPA-203ENST00000485042 PABPC4Q13310 644 aaKnown RBP eCLIP6.09□□□□□ -1.43
XPA-203ENST00000485042 FAM209AQ5JX71 171 aa6.09□□□□□ -1.43
XPA-203ENST00000485042 AGGF1Q8N302 714 aaeCLIP6.09□□□□□ -1.43
XPA-203ENST00000485042 MFSD2AQ8NA29 543 aa6.09□□□□□ -1.43
XPA-203ENST00000485042 EXOC2Q96KP1 924 aa6.09□□□□□ -1.43
XPA-203ENST00000485042 DHRS4Q9BTZ2 278 aa6.09□□□□□ -1.43
XPA-203ENST00000485042 KLHL25Q9H0H3 589 aa6.09□□□□□ -1.43
XPA-203ENST00000485042 GSX1Q9H4S2 264 aaPredicted RBP6.09□□□□□ -1.43
XPA-203ENST00000485042 APEX2Q9UBZ4 518 aa6.09□□□□□ -1.43
XPA-203ENST00000485042 TRBV23-1A0A0A0MS06 115 aa6.08□□□□□ -1.44
XPA-203ENST00000485042 PIK3R2O00459 728 aa6.08□□□□□ -1.44
XPA-203ENST00000485042 NOP56O00567 594 aaKnown RBP6.08□□□□□ -1.44
XPA-203ENST00000485042 GNB5O14775 395 aa6.08□□□□□ -1.44
XPA-203ENST00000485042 SART1O43290 800 aaKnown RBP6.08□□□□□ -1.44
XPA-203ENST00000485042 CBFA2T2O43439 604 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms