RNA–Protein interactions for RNA: ENST00000484990.1

COL13A1-209, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 360 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-209ENST00000484990 TRPV1Q8NER1 839 aa13.98□□□□□ -0.17
COL13A1-209ENST00000484990 GUCD1Q96NT3 240 aa13.98□□□□□ -0.17
COL13A1-209ENST00000484990 TANGO6Q9C0B7 1094 aa13.98□□□□□ -0.17
COL13A1-209ENST00000484990 SPATC1LQ9H0A9 340 aa13.98□□□□□ -0.17
COL13A1-209ENST00000484990 MROH8Q9H579 483 aa13.98□□□□□ -0.17
COL13A1-209ENST00000484990 ANTXR1Q9H6X2 564 aa13.98□□□□□ -0.17
COL13A1-209ENST00000484990 MCM9Q9NXL9 1143 aa13.98□□□□□ -0.17
COL13A1-209ENST00000484990 TLR7Q9NYK1 1049 aaKnown RBP13.98□□□□□ -0.17
COL13A1-209ENST00000484990 FRMPD3Q5JV73 1810 aa13.98□□□□□ -0.17
COL13A1-209ENST00000484990 IGHA2P01877 340 aa13.97□□□□□ -0.17
COL13A1-209ENST00000484990 MYCNP04198 464 aaPredicted RBP13.97□□□□□ -0.17
COL13A1-209ENST00000484990 ERCC3P19447 782 aa13.97□□□□□ -0.17
COL13A1-209ENST00000484990 PLS1Q14651 629 aa13.97□□□□□ -0.17
COL13A1-209ENST00000484990 ABRAQ8N0Z2 381 aa13.97□□□□□ -0.17
COL13A1-209ENST00000484990 RIOK1Q9BRS2 568 aaKnown RBP13.97□□□□□ -0.17
COL13A1-209ENST00000484990 C1orf115Q9H7X2 142 aa13.97□□□□□ -0.17
COL13A1-209ENST00000484990 PRDM5Q9NQX1 630 aaPredicted RBP13.97□□□□□ -0.17
COL13A1-209ENST00000484990 DSG3P32926 999 aa13.96□□□□□ -0.17
COL13A1-209ENST00000484990 GABPAQ06546 454 aa13.96□□□□□ -0.17
COL13A1-209ENST00000484990 SHHQ15465 462 aa13.96□□□□□ -0.17
COL13A1-209ENST00000484990 HSP90AB4PQ58FF6 505 aa13.96□□□□□ -0.17
COL13A1-209ENST00000484990 SLC9C2Q5TAH2 1124 aa13.96□□□□□ -0.17
COL13A1-209ENST00000484990 TMEM179Q6ZVK1 233 aa13.96□□□□□ -0.17
COL13A1-209ENST00000484990 AACSQ86V21 672 aa13.96□□□□□ -0.17
COL13A1-209ENST00000484990 NCAPG2Q86XI2 1143 aa13.96□□□□□ -0.17
COL13A1-209ENST00000484990 ITPRIPQ8IWB1 547 aa13.96□□□□□ -0.17
COL13A1-209ENST00000484990 SEMA6BQ9H3T3 888 aa13.96□□□□□ -0.17
COL13A1-209ENST00000484990 SH2D4AQ9H788 454 aa13.96□□□□□ -0.17
COL13A1-209ENST00000484990 ARHGEF10LQ9HCE6 1279 aa13.96□□□□□ -0.17
COL13A1-209ENST00000484990 SWAP70Q9UH65 585 aa13.96□□□□□ -0.17
COL13A1-209ENST00000484990 A0A1W2PRG0 241 aa13.95□□□□□ -0.18
COL13A1-209ENST00000484990 COBLO75128 1261 aa13.95□□□□□ -0.18
COL13A1-209ENST00000484990 FLOT1O75955 427 aa13.95□□□□□ -0.18
COL13A1-209ENST00000484990 SLC25A27O95847 323 aa13.95□□□□□ -0.18
COL13A1-209ENST00000484990 FCER1AP12319 257 aa13.95□□□□□ -0.18
COL13A1-209ENST00000484990 ADCYAP1R1P41586 468 aa13.95□□□□□ -0.18
COL13A1-209ENST00000484990 SMAD3P84022 425 aaKnown RBP13.95□□□□□ -0.18
COL13A1-209ENST00000484990 C1orf53Q5VUE5 145 aa13.95□□□□□ -0.18
COL13A1-209ENST00000484990 ANO1Q5XXA6 986 aa13.95□□□□□ -0.18
COL13A1-209ENST00000484990 BADQ92934 168 aa13.95□□□□□ -0.18
COL13A1-209ENST00000484990 CDX2Q99626 313 aaPredicted RBP13.95□□□□□ -0.18
COL13A1-209ENST00000484990 TACC3Q9Y6A5 838 aa13.95□□□□□ -0.18
COL13A1-209ENST00000484990 RLFQ13129 1914 aa13.95□□□□□ -0.18
COL13A1-209ENST00000484990 ZNFX1Q9P2E3 1918 aaKnown RBP13.95□□□□□ -0.18
COL13A1-209ENST00000484990 SMCHD1A6NHR9 2005 aa13.95□□□□□ -0.18
COL13A1-209ENST00000484990 SNX17Q15036 470 aa13.94□□□□□ -0.18
COL13A1-209ENST00000484990 LRRC41Q15345 812 aa13.94□□□□□ -0.18
COL13A1-209ENST00000484990 PRAMEF19Q5SWL8 479 aa13.94□□□□□ -0.18
COL13A1-209ENST00000484990 CCDC17Q96LX7 622 aa13.94□□□□□ -0.18
COL13A1-209ENST00000484990 NRBP1Q9UHY1 535 aa13.94□□□□□ -0.18
COL13A1-209ENST00000484990 RARBP10826 455 aa13.93□□□□□ -0.18
COL13A1-209ENST00000484990 PDE6AP16499 860 aa13.93□□□□□ -0.18
COL13A1-209ENST00000484990 TRIM60Q495X7 471 aa13.93□□□□□ -0.18
COL13A1-209ENST00000484990 C9orf50Q5SZB4 431 aa13.93□□□□□ -0.18
COL13A1-209ENST00000484990 RNF180Q86T96 592 aa13.93□□□□□ -0.18
COL13A1-209ENST00000484990 AMOTL1Q8IY63 956 aa13.93□□□□□ -0.18
COL13A1-209ENST00000484990 CLASRPQ8N2M8 674 aaKnown RBP13.93□□□□□ -0.18
COL13A1-209ENST00000484990 FERMT2Q96AC1 680 aa13.93□□□□□ -0.18
COL13A1-209ENST00000484990 MAML3Q96JK9 1138 aa13.93□□□□□ -0.18
COL13A1-209ENST00000484990 DCP1AQ9NPI6 582 aaPredicted RBP13.93□□□□□ -0.18
COL13A1-209ENST00000484990 EXOC6BQ9Y2D4 811 aa13.93□□□□□ -0.18
COL13A1-209ENST00000484990 TMX2Q9Y320 296 aa13.93□□□□□ -0.18
COL13A1-209ENST00000484990 ZNF532Q9HCE3 1301 aa13.92□□□□□ -0.18
COL13A1-209ENST00000484990 LAMA2P24043 3122 aaKnown RBP13.92□□□□□ -0.18
COL13A1-209ENST00000484990 WDR46O15213 610 aaKnown RBP13.92□□□□□ -0.18
COL13A1-209ENST00000484990 ICA1Q05084 483 aa13.92□□□□□ -0.18
COL13A1-209ENST00000484990 CEP85Q6P2H3 762 aa13.92□□□□□ -0.18
COL13A1-209ENST00000484990 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
COL13A1-209ENST00000484990 MAFAQ8NHW3 353 aaPredicted RBP13.92□□□□□ -0.18
COL13A1-209ENST00000484990 RHPN1Q8TCX5 695 aa13.92□□□□□ -0.18
COL13A1-209ENST00000484990 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.92□□□□□ -0.18
COL13A1-209ENST00000484990 SDR42E1Q8WUS8 393 aa13.92□□□□□ -0.18
COL13A1-209ENST00000484990 ATG4CQ96DT6 458 aa13.92□□□□□ -0.18
COL13A1-209ENST00000484990 VCPKMTQ9H867 229 aa13.92□□□□□ -0.18
COL13A1-209ENST00000484990 PDLIM7Q9NR12 457 aa13.92□□□□□ -0.18
COL13A1-209ENST00000484990 ATP8A2Q9NTI2 1148 aa13.92□□□□□ -0.18
COL13A1-209ENST00000484990 DIS3Q9Y2L1 958 aaKnown RBP13.92□□□□□ -0.18
COL13A1-209ENST00000484990 UNC80Q8N2C7 3258 aa13.92□□□□□ -0.18
COL13A1-209ENST00000484990 TRIM43BA6NCK2 446 aa13.91□□□□□ -0.18
COL13A1-209ENST00000484990 TLE2Q04725 743 aa13.91□□□□□ -0.18
COL13A1-209ENST00000484990 KCTD2Q14681 263 aa13.91□□□□□ -0.18
COL13A1-209ENST00000484990 FAM47AQ5JRC9 791 aa13.91□□□□□ -0.18
COL13A1-209ENST00000484990 SH3RF1Q7Z6J0 888 aa13.91□□□□□ -0.18
COL13A1-209ENST00000484990 SPICE1Q8N0Z3 855 aa13.91□□□□□ -0.18
COL13A1-209ENST00000484990 TRIM43Q96BQ3 446 aaPredicted RBP13.91□□□□□ -0.18
COL13A1-209ENST00000484990 DDRGK1Q96HY6 314 aa13.91□□□□□ -0.18
COL13A1-209ENST00000484990 MMP19Q99542 508 aa13.91□□□□□ -0.18
COL13A1-209ENST00000484990 TINF2Q9BSI4 451 aa13.91□□□□□ -0.18
COL13A1-209ENST00000484990 IL1RAPL2Q9NP60 686 aa13.91□□□□□ -0.18
COL13A1-209ENST00000484990 XPNPEP3Q9NQH7 507 aa13.91□□□□□ -0.18
COL13A1-209ENST00000484990 PHF24Q9UPV7 400 aa13.91□□□□□ -0.18
COL13A1-209ENST00000484990 ZNF236Q9UL36 1845 aa13.91□□□□□ -0.18
COL13A1-209ENST00000484990 TMEM265A0A087WTH1 108 aa13.9□□□□□ -0.18
COL13A1-209ENST00000484990 GOLIM4O00461 696 aa13.9□□□□□ -0.18
COL13A1-209ENST00000484990 CLTBP09497 229 aa13.9□□□□□ -0.18
COL13A1-209ENST00000484990 IFIT2P09913 472 aaKnown RBP13.9□□□□□ -0.18
COL13A1-209ENST00000484990 RAG1P15918 1043 aa13.9□□□□□ -0.18
COL13A1-209ENST00000484990 COPB2P35606 906 aa13.9□□□□□ -0.18
COL13A1-209ENST00000484990 STAT3P40763 770 aa13.9□□□□□ -0.18
COL13A1-209ENST00000484990 KIAA1755Q5JYT7 1200 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms