RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 SYNPO2Q9UMS6 1093 aa23.8■■□□□ 1.4
VCPKMT-203ENST00000484763 MTMR7Q9Y216 660 aa23.8■■□□□ 1.4
VCPKMT-203ENST00000484763 PDCP20941 246 aa23.8■■□□□ 1.4
VCPKMT-203ENST00000484763 NUCB2P80303 420 aa23.8■■□□□ 1.4
VCPKMT-203ENST00000484763 CDC37L1Q7L3B6 337 aa23.8■■□□□ 1.4
VCPKMT-203ENST00000484763 USP48Q86UV5 1035 aa23.8■■□□□ 1.4
VCPKMT-203ENST00000484763 SIAH1Q8IUQ4 282 aa23.8■■□□□ 1.4
VCPKMT-203ENST00000484763 WRNIP1Q96S55 665 aa23.8■■□□□ 1.4
VCPKMT-203ENST00000484763 ARHGEF10LQ9HCE6 1279 aa23.8■■□□□ 1.4
VCPKMT-203ENST00000484763 CLEC11AQ9Y240 323 aa23.8■■□□□ 1.4
VCPKMT-203ENST00000484763 STK36Q9NRP7 1315 aa23.79■■□□□ 1.4
VCPKMT-203ENST00000484763 PPFIA3O75145 1194 aa23.79■■□□□ 1.4
VCPKMT-203ENST00000484763 ORC3Q9UBD5 711 aaPredicted RBP23.79■■□□□ 1.4
VCPKMT-203ENST00000484763 MAD2L2Q9UI95 211 aa23.79■■□□□ 1.4
VCPKMT-203ENST00000484763 MYH6P13533 1939 aa23.78■■□□□ 1.4
VCPKMT-203ENST00000484763 PLEKHA8P1O95397 391 aa23.78■■□□□ 1.4
VCPKMT-203ENST00000484763 PARP1P09874 1014 aaKnown RBP23.78■■□□□ 1.4
VCPKMT-203ENST00000484763 PDHBP11177 359 aa23.78■■□□□ 1.4
VCPKMT-203ENST00000484763 FDPSP14324 419 aaKnown RBP23.78■■□□□ 1.4
VCPKMT-203ENST00000484763 GNAQP50148 359 aa23.78■■□□□ 1.4
VCPKMT-203ENST00000484763 PHKBQ93100 1093 aa23.78■■□□□ 1.4
VCPKMT-203ENST00000484763 KLRG1Q96E93 195 aa23.78■■□□□ 1.4
VCPKMT-203ENST00000484763 CDCA5Q96FF9 252 aa23.78■■□□□ 1.4
VCPKMT-203ENST00000484763 FMNL1O95466 1100 aaPredicted RBP23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 SNHG28P0DPA3 235 aa23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 SYT1P21579 422 aa23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 INPP5BP32019 993 aa23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 SSRP1Q08945 709 aaKnown RBP23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 DLK2Q6UY11 383 aa23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 TRIM22Q8IYM9 498 aa23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 CMTR1Q8N1G2 835 aaKnown RBP23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 SLC26A6Q9BXS9 759 aa23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 GLIS2Q9BZE0 524 aaPredicted RBP23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 PAPPA2Q9BXP8 1791 aa23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 PALM3A6NDB9 673 aaPredicted RBP23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 USP17L5A8MUK1 530 aa23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 POTEIP0CG38 1075 aa23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 POTEJP0CG39 1038 aa23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 PDIA4P13667 645 aaKnown RBP23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 NF2P35240 595 aa23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 PKP1Q13835 747 aa23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 LARP1BQ659C4 914 aaKnown RBP23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 RASGRP2Q7LDG7 609 aa23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 NBPF11Q86T75 865 aa23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 SCYL3Q8IZE3 742 aa23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 GMCL1P1Q8NEA9 526 aa23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.77■■□□□ 1.4
VCPKMT-203ENST00000484763 STX6O43752 255 aa23.76■■□□□ 1.39
VCPKMT-203ENST00000484763 ASPRV1Q53RT3 343 aa23.76■■□□□ 1.39
VCPKMT-203ENST00000484763 STAG2Q8N3U4 1231 aa23.76■■□□□ 1.39
VCPKMT-203ENST00000484763 CCDC82Q8N4S0 544 aa23.76■■□□□ 1.39
VCPKMT-203ENST00000484763 LZTS2Q9BRK4 669 aa23.76■■□□□ 1.39
VCPKMT-203ENST00000484763 RNF26Q9BY78 433 aaPredicted RBP23.76■■□□□ 1.39
VCPKMT-203ENST00000484763 SH2D4AQ9H788 454 aa23.76■■□□□ 1.39
VCPKMT-203ENST00000484763 FZD1Q9UP38 647 aa23.76■■□□□ 1.39
VCPKMT-203ENST00000484763 OTOFQ9HC10 1997 aa23.76■■□□□ 1.39
VCPKMT-203ENST00000484763 PPP1R12BO60237 982 aaPredicted RBP23.75■■□□□ 1.39
VCPKMT-203ENST00000484763 FUT2Q10981 343 aa23.75■■□□□ 1.39
VCPKMT-203ENST00000484763 USP17L2Q6R6M4 530 aa23.75■■□□□ 1.39
VCPKMT-203ENST00000484763 CNTNAP5Q8WYK1 1306 aa23.75■■□□□ 1.39
VCPKMT-203ENST00000484763 A0A1W2PRG0 241 aa23.75■■□□□ 1.39
VCPKMT-203ENST00000484763 LDHDQ86WU2 507 aa23.75■■□□□ 1.39
VCPKMT-203ENST00000484763 SRBD1Q8N5C6 995 aaKnown RBP23.75■■□□□ 1.39
VCPKMT-203ENST00000484763 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.75■■□□□ 1.39
VCPKMT-203ENST00000484763 DCAF4Q8WV16 495 aa23.75■■□□□ 1.39
VCPKMT-203ENST00000484763 NMRK2Q9NPI5 230 aa23.75■■□□□ 1.39
VCPKMT-203ENST00000484763 TMX2Q9Y320 296 aa23.75■■□□□ 1.39
VCPKMT-203ENST00000484763 USP2O75604 605 aaPredicted RBP23.74■■□□□ 1.39
VCPKMT-203ENST00000484763 GOLGA8HP0CJ92 632 aa23.74■■□□□ 1.39
VCPKMT-203ENST00000484763 ECE1P42892 770 aa23.74■■□□□ 1.39
VCPKMT-203ENST00000484763 PRKG1Q13976 671 aa23.74■■□□□ 1.39
VCPKMT-203ENST00000484763 NOL9Q5SY16 702 aaKnown RBP23.74■■□□□ 1.39
VCPKMT-203ENST00000484763 ACER1Q8TDN7 264 aa23.74■■□□□ 1.39
VCPKMT-203ENST00000484763 ZNF526Q8TF50 670 aaPredicted RBP23.74■■□□□ 1.39
VCPKMT-203ENST00000484763 WASF1Q92558 559 aa23.74■■□□□ 1.39
VCPKMT-203ENST00000484763 ZKSCAN4Q969J2 545 aaPredicted RBP23.74■■□□□ 1.39
VCPKMT-203ENST00000484763 PICK1Q9NRD5 415 aa23.74■■□□□ 1.39
VCPKMT-203ENST00000484763 WDR33Q9C0J8 1336 aaKnown RBP23.74■■□□□ 1.39
VCPKMT-203ENST00000484763 KLRF2D3W0D1 207 aa23.73■■□□□ 1.39
VCPKMT-203ENST00000484763 F5H6K3 240 aa23.73■■□□□ 1.39
VCPKMT-203ENST00000484763 RAD21O60216 631 aa23.73■■□□□ 1.39
VCPKMT-203ENST00000484763 DEXIO95424 95 aa23.73■■□□□ 1.39
VCPKMT-203ENST00000484763 BRD1O95696 1058 aa23.73■■□□□ 1.39
VCPKMT-203ENST00000484763 AKAP17AQ02040 695 aaKnown RBP23.73■■□□□ 1.39
VCPKMT-203ENST00000484763 KLRC3Q07444 240 aa23.73■■□□□ 1.39
VCPKMT-203ENST00000484763 ZNF543Q08ER8 600 aa23.73■■□□□ 1.39
VCPKMT-203ENST00000484763 GPATCH4Q5T3I0 446 aaKnown RBP23.73■■□□□ 1.39
VCPKMT-203ENST00000484763 MAP1SQ66K74 1059 aaPredicted RBP23.73■■□□□ 1.39
VCPKMT-203ENST00000484763 SLFN13Q68D06 897 aa23.73■■□□□ 1.39
VCPKMT-203ENST00000484763 GOPCQ9HD26 462 aa23.73■■□□□ 1.39
VCPKMT-203ENST00000484763 PRPF3O43395 683 aaKnown RBP23.73■■□□□ 1.39
VCPKMT-203ENST00000484763 CCDC96Q2M329 555 aa23.73■■□□□ 1.39
VCPKMT-203ENST00000484763 FRMPD2Q68DX3 1309 aaPredicted RBP23.72■■□□□ 1.39
VCPKMT-203ENST00000484763 VPS37CA5D8V6 355 aaPredicted RBP23.72■■□□□ 1.39
VCPKMT-203ENST00000484763 NDUFB10O96000 172 aa23.72■■□□□ 1.39
VCPKMT-203ENST00000484763 SLC1A4P43007 532 aa23.72■■□□□ 1.39
VCPKMT-203ENST00000484763 IREB2P48200 963 aaKnown RBP23.72■■□□□ 1.39
VCPKMT-203ENST00000484763 CCDC84Q86UT8 332 aaPredicted RBP23.72■■□□□ 1.39
VCPKMT-203ENST00000484763 GMCL1Q96IK5 515 aa23.72■■□□□ 1.39
VCPKMT-203ENST00000484763 SPZ1Q9BXG8 430 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms