RNA–Protein interactions for RNA: ENST00000484686.1

CNTN4-216, Transcript of contactin 4, humanhuman

TSL 1 (best)

Gene CNTN4, Length 3,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-216ENST00000484686 MB21D2Q8IYB1 491 aaPredicted RBP6.29□□□□□ -1.4
CNTN4-216ENST00000484686 CMTR1Q8N1G2 835 aaKnown RBP6.29□□□□□ -1.4
CNTN4-216ENST00000484686 ENAHQ8N8S7 591 aaPredicted RBP6.29□□□□□ -1.4
CNTN4-216ENST00000484686 NUP133Q8WUM0 1156 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 BRF1Q92994 677 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 HOOK2Q96ED9 719 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 ZSCAN10Q96SZ4 725 aaPredicted RBP6.29□□□□□ -1.4
CNTN4-216ENST00000484686 NUP88Q99567 741 aaPredicted RBP6.29□□□□□ -1.4
CNTN4-216ENST00000484686 CYP46A1Q9Y6A2 500 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 SNCAIPQ9Y6H5 919 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 NAV1Q8NEY1 1877 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 ERICH2A1L162 156 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 GOLGA8HP0CJ92 632 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 RBM25P49756 843 aaKnown RBP6.29□□□□□ -1.4
CNTN4-216ENST00000484686 ANAPC15P60006 121 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 MAP3K10Q02779 954 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 KRT32Q14532 448 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 DNTTIP2Q5QJE6 756 aaKnown RBP6.29□□□□□ -1.4
CNTN4-216ENST00000484686 SCYL3Q8IZE3 742 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 ZIC5Q96T25 663 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 CPVLQ9H3G5 476 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 MTMR4Q9NYA4 1195 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 DDX60LQ5H9U9 1706 aaKnown RBP6.28□□□□□ -1.4
CNTN4-216ENST00000484686 ORC4O43929 436 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 FGRP09769 529 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 RPS6KB1P23443 525 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 PSMA5P28066 241 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 HMGCS2P54868 508 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 APOBRQ0VD83 1088 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 IFIT1BQ5T764 474 aaKnown RBP6.28□□□□□ -1.4
CNTN4-216ENST00000484686 TMEM179Q6ZVK1 233 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 MICU3Q86XE3 530 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 PIBF1Q8WXW3 757 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 CCDC17Q96LX7 622 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 PDRG1Q9NUG6 133 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 PRR29P0C7W0 189 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 CCT2P78371 535 aaKnown RBP6.28□□□□□ -1.4
CNTN4-216ENST00000484686 TSGA10IPQ3SY00 556 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 KIAA1755Q5JYT7 1200 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 RCSD1Q6JBY9 416 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 SPRYD3Q8NCJ5 442 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 NEDD1Q8NHV4 660 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 IGDCC4Q8TDY8 1250 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 TMEM47Q9BQJ4 181 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 KANSL2Q9H9L4 492 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 ZSWIM6Q9HCJ5 1215 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 ZNF112Q9UJU3 913 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 DNAH12Q6ZR08 3092 aa6.28□□□□□ -1.4
CNTN4-216ENST00000484686 ROBO3Q96MS0 1386 aa6.27□□□□□ -1.4
CNTN4-216ENST00000484686 FOCADQ5VW36 1801 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 USP17L5A8MUK1 530 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 TTLL1O95922 423 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 GJA5P36382 358 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 APLP1P51693 650 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 AK2P54819 239 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 EXOSC10Q01780 885 aaKnown RBP6.27□□□□□ -1.41
CNTN4-216ENST00000484686 FSTL1Q12841 308 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 WTAPQ15007 396 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 SART3Q15020 963 aaKnown RBP6.27□□□□□ -1.41
CNTN4-216ENST00000484686 LDLRAD1Q5T700 205 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 USP17L2Q6R6M4 530 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 KCTD1Q719H9 257 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 ZNF280CQ8ND82 737 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 FRMPD2Q68DX3 1309 aaPredicted RBP6.27□□□□□ -1.41
CNTN4-216ENST00000484686 SIPA1L1O43166 1804 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 F5H6K3 240 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 PEX10O60683 326 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 AOC2O75106 756 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 DSG3P32926 999 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 SLC4A3P48751 1232 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 KLRC3Q07444 240 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 GPATCH11Q8N954 259 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 NECAB1Q8N987 351 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 PNMA1Q8ND90 353 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 KCNB2Q92953 911 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 KAT14Q9H8E8 782 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 LY9Q9HBG7 655 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 NCOA5Q9HCD5 579 aaKnown RBP6.27□□□□□ -1.41
CNTN4-216ENST00000484686 FOXD4L1Q9NU39 408 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 KLF18A0A0U1RQI7 1052 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 hCG_1642624A0A1W2PR95 340 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 CCDC69A6NI79 296 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 USP17L10C9JJH3 530 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 SLC16A2P36021 539 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 CLCN6P51797 869 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 C1QTNF8P60827 252 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 IKQ13123 557 aaPredicted RBP6.27□□□□□ -1.41
CNTN4-216ENST00000484686 TOB2Q14106 344 aaPredicted RBP6.27□□□□□ -1.41
CNTN4-216ENST00000484686 DEFB115Q30KQ5 88 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 RGMBQ6NW40 437 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 GADL1Q6ZQY3 521 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 ERO1BQ86YB8 467 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 VAT1LQ9HCJ6 419 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 GPCPD1Q9NPB8 672 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 SLC12A7Q9Y666 1083 aa6.27□□□□□ -1.41
CNTN4-216ENST00000484686 BAZ2BQ9UIF8 2168 aaKnown RBP6.26□□□□□ -1.41
CNTN4-216ENST00000484686 PCP11498 1178 aaKnown RBP6.26□□□□□ -1.41
CNTN4-216ENST00000484686 SNAP25P60880 206 aa6.26□□□□□ -1.41
CNTN4-216ENST00000484686 SEC23AQ15436 765 aa6.26□□□□□ -1.41
CNTN4-216ENST00000484686 STAG2Q8N3U4 1231 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms