RNA–Protein interactions for RNA: ENST00000484404.1

ITGA4-210, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-210ENST00000484404 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.47■□□□□ 0.23
ITGA4-210ENST00000484404 ARHGEF10LQ9HCE6 1279 aa16.47■□□□□ 0.23
ITGA4-210ENST00000484404 SALL3Q9BXA9 1300 aa16.46■□□□□ 0.23
ITGA4-210ENST00000484404 GLRX3O76003 335 aaKnown RBP16.46■□□□□ 0.23
ITGA4-210ENST00000484404 HMGCRP04035 888 aa16.46■□□□□ 0.23
ITGA4-210ENST00000484404 MAPK4P31152 587 aa16.46■□□□□ 0.23
ITGA4-210ENST00000484404 CCL14Q16627 93 aa16.46■□□□□ 0.23
ITGA4-210ENST00000484404 CCDC129Q6ZRS4 1044 aa16.46■□□□□ 0.23
ITGA4-210ENST00000484404 PLEKHH3Q7Z736 793 aa16.46■□□□□ 0.23
ITGA4-210ENST00000484404 SIAH1Q8IUQ4 282 aa16.46■□□□□ 0.23
ITGA4-210ENST00000484404 GTF3C2Q8WUA4 911 aaPredicted RBP16.46■□□□□ 0.23
ITGA4-210ENST00000484404 NUDT12Q9BQG2 462 aa16.46■□□□□ 0.23
ITGA4-210ENST00000484404 RABGAP1Q9Y3P9 1069 aa16.46■□□□□ 0.23
ITGA4-210ENST00000484404 ZNF236Q9UL36 1845 aa16.46■□□□□ 0.23
ITGA4-210ENST00000484404 PRDM1O75626 825 aa16.45■□□□□ 0.22
ITGA4-210ENST00000484404 FARP2O94887 1054 aaPredicted RBP16.45■□□□□ 0.22
ITGA4-210ENST00000484404 TFRCP02786 760 aaKnown RBP16.45■□□□□ 0.22
ITGA4-210ENST00000484404 EEF2P13639 858 aaKnown RBP16.45■□□□□ 0.22
ITGA4-210ENST00000484404 B4GALNT3Q6L9W6 998 aa16.45■□□□□ 0.22
ITGA4-210ENST00000484404 EXOC6Q8TAG9 804 aa16.45■□□□□ 0.22
ITGA4-210ENST00000484404 NKX2-3Q8TAU0 364 aa16.45■□□□□ 0.22
ITGA4-210ENST00000484404 FLOT1O75955 427 aa16.44■□□□□ 0.22
ITGA4-210ENST00000484404 SGPL1O95470 568 aa16.44■□□□□ 0.22
ITGA4-210ENST00000484404 ZFYP08048 801 aaPredicted RBP16.44■□□□□ 0.22
ITGA4-210ENST00000484404 ZKSCAN1P17029 563 aaPredicted RBP16.44■□□□□ 0.22
ITGA4-210ENST00000484404 PLS1Q14651 629 aa16.44■□□□□ 0.22
ITGA4-210ENST00000484404 DIS3LQ8TF46 1054 aaKnown RBP16.44■□□□□ 0.22
ITGA4-210ENST00000484404 SOCS4Q8WXH5 440 aa16.44■□□□□ 0.22
ITGA4-210ENST00000484404 ATG4CQ96DT6 458 aa16.44■□□□□ 0.22
ITGA4-210ENST00000484404 LNPKQ9C0E8 428 aa16.44■□□□□ 0.22
ITGA4-210ENST00000484404 PAK6Q9NQU5 681 aaPredicted RBP16.44■□□□□ 0.22
ITGA4-210ENST00000484404 CEP290O15078 2479 aa16.44■□□□□ 0.22
ITGA4-210ENST00000484404 ROBO3Q96MS0 1386 aa16.43■□□□□ 0.22
ITGA4-210ENST00000484404 PRKAR2AP13861 404 aaKnown RBP16.43■□□□□ 0.22
ITGA4-210ENST00000484404 RASA1P20936 1047 aa16.43■□□□□ 0.22
ITGA4-210ENST00000484404 RGS2P41220 211 aa16.43■□□□□ 0.22
ITGA4-210ENST00000484404 HDAC1Q13547 482 aaPredicted RBP16.43■□□□□ 0.22
ITGA4-210ENST00000484404 MORN1Q5T089 497 aa16.43■□□□□ 0.22
ITGA4-210ENST00000484404 DPF3Q92784 378 aa16.43■□□□□ 0.22
ITGA4-210ENST00000484404 CCDC17Q96LX7 622 aa16.43■□□□□ 0.22
ITGA4-210ENST00000484404 VCPKMTQ9H867 229 aa16.43■□□□□ 0.22
ITGA4-210ENST00000484404 MKNK2Q9HBH9 465 aa16.43■□□□□ 0.22
ITGA4-210ENST00000484404 FBXO28Q9NVF7 368 aa16.43■□□□□ 0.22
ITGA4-210ENST00000484404 TMX2Q9Y320 296 aa16.43■□□□□ 0.22
ITGA4-210ENST00000484404 CCNA1P78396 465 aa16.42■□□□□ 0.22
ITGA4-210ENST00000484404 COG2Q14746 738 aa16.42■□□□□ 0.22
ITGA4-210ENST00000484404 SBK1Q52WX2 424 aa16.42■□□□□ 0.22
ITGA4-210ENST00000484404 ZMYM1Q5SVZ6 1142 aa16.42■□□□□ 0.22
ITGA4-210ENST00000484404 IFNL3Q8IZI9 196 aa16.42■□□□□ 0.22
ITGA4-210ENST00000484404 GCC1Q96CN9 775 aa16.42■□□□□ 0.22
ITGA4-210ENST00000484404 NUP88Q99567 741 aaPredicted RBP16.42■□□□□ 0.22
ITGA4-210ENST00000484404 APBA2Q99767 749 aa16.42■□□□□ 0.22
ITGA4-210ENST00000484404 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.42■□□□□ 0.22
ITGA4-210ENST00000484404 MOV10L1Q9BXT6 1211 aaKnown RBP16.42■□□□□ 0.22
ITGA4-210ENST00000484404 SH2D4AQ9H788 454 aa16.42■□□□□ 0.22
ITGA4-210ENST00000484404 HMX1Q9NP08 348 aaPredicted RBP16.42■□□□□ 0.22
ITGA4-210ENST00000484404 H0YGN5 161 aa16.41■□□□□ 0.22
ITGA4-210ENST00000484404 GNAT2P19087 354 aa16.41■□□□□ 0.22
ITGA4-210ENST00000484404 CCND3P30281 292 aaPredicted RBP16.41■□□□□ 0.22
ITGA4-210ENST00000484404 PDE1AP54750 535 aa16.41■□□□□ 0.22
ITGA4-210ENST00000484404 IRX6P78412 446 aaPredicted RBP16.41■□□□□ 0.22
ITGA4-210ENST00000484404 CACNB2Q08289 660 aaPredicted RBP16.41■□□□□ 0.22
ITGA4-210ENST00000484404 MAP2K5Q13163 448 aa16.41■□□□□ 0.22
ITGA4-210ENST00000484404 LRRFIP1Q32MZ4 808 aaKnown RBP16.41■□□□□ 0.22
ITGA4-210ENST00000484404 FAM83BQ5T0W9 1011 aa16.41■□□□□ 0.22
ITGA4-210ENST00000484404 LBX2Q6XYB7 198 aa16.41■□□□□ 0.22
ITGA4-210ENST00000484404 USP6NLQ92738 828 aa16.41■□□□□ 0.22
ITGA4-210ENST00000484404 CHMP4CQ96CF2 233 aa16.41■□□□□ 0.22
ITGA4-210ENST00000484404 KANSL2Q9H9L4 492 aa16.41■□□□□ 0.22
ITGA4-210ENST00000484404 FLRT1Q9NZU1 646 aa16.41■□□□□ 0.22
ITGA4-210ENST00000484404 IVNS1ABPQ9Y6Y0 642 aa16.41■□□□□ 0.22
ITGA4-210ENST00000484404 LAMA4Q16363 1823 aa16.4■□□□□ 0.22
ITGA4-210ENST00000484404 PATL2C9JE40 543 aaKnown RBP16.4■□□□□ 0.22
ITGA4-210ENST00000484404 WDR46O15213 610 aaKnown RBP16.4■□□□□ 0.22
ITGA4-210ENST00000484404 IGHDP01880 384 aa16.4■□□□□ 0.22
ITGA4-210ENST00000484404 PTPREP23469 700 aa16.4■□□□□ 0.22
ITGA4-210ENST00000484404 DSG3P32926 999 aa16.4■□□□□ 0.22
ITGA4-210ENST00000484404 GIMAP6Q6P9H5 292 aa16.4■□□□□ 0.22
ITGA4-210ENST00000484404 UBE2Q1Q7Z7E8 422 aa16.4■□□□□ 0.22
ITGA4-210ENST00000484404 NPLOC4Q8TAT6 608 aa16.4■□□□□ 0.22
ITGA4-210ENST00000484404 LPAR1Q92633 364 aa16.4■□□□□ 0.22
ITGA4-210ENST00000484404 PAWRQ96IZ0 340 aaKnown RBP16.4■□□□□ 0.22
ITGA4-210ENST00000484404 NAPBQ9H115 298 aa16.4■□□□□ 0.22
ITGA4-210ENST00000484404 RPTORQ8N122 1335 aa16.4■□□□□ 0.22
ITGA4-210ENST00000484404 MCM3APO60318 1980 aa16.39■□□□□ 0.21
ITGA4-210ENST00000484404 ERCC3P19447 782 aa16.39■□□□□ 0.21
ITGA4-210ENST00000484404 CTDSPL2Q05D32 466 aa16.39■□□□□ 0.21
ITGA4-210ENST00000484404 FAM47AQ5JRC9 791 aa16.39■□□□□ 0.21
ITGA4-210ENST00000484404 VPS53Q5VIR6 699 aa16.39■□□□□ 0.21
ITGA4-210ENST00000484404 NCAPG2Q86XI2 1143 aa16.39■□□□□ 0.21
ITGA4-210ENST00000484404 LRRC47Q8N1G4 583 aaKnown RBP16.39■□□□□ 0.21
ITGA4-210ENST00000484404 SPATC1LQ9H0A9 340 aa16.39■□□□□ 0.21
ITGA4-210ENST00000484404 CRISPLD2Q9H0B8 497 aa16.39■□□□□ 0.21
ITGA4-210ENST00000484404 GOPCQ9HD26 462 aa16.39■□□□□ 0.21
ITGA4-210ENST00000484404 HOXC10Q9NYD6 342 aa16.39■□□□□ 0.21
ITGA4-210ENST00000484404 PCDH10Q9P2E7 1040 aa16.39■□□□□ 0.21
ITGA4-210ENST00000484404 SLC15A5A6NIM6 579 aa16.38■□□□□ 0.21
ITGA4-210ENST00000484404 TRIM6-TRIM34B2RNG4 842 aa16.38■□□□□ 0.21
ITGA4-210ENST00000484404 FOXP2O15409 715 aa16.38■□□□□ 0.21
ITGA4-210ENST00000484404 XRCC5P13010 732 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms