RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 TANGO6Q9C0B7 1094 aa14.66□□□□□ -0.06
MSH5-216ENST00000484309 RBPJLQ9UBG7 517 aa14.66□□□□□ -0.06
MSH5-216ENST00000484309 MORF4L1Q9UBU8 362 aa14.66□□□□□ -0.06
MSH5-216ENST00000484309 ZNFX1Q9P2E3 1918 aaKnown RBP14.66□□□□□ -0.06
MSH5-216ENST00000484309 RAD21O60216 631 aa14.65□□□□□ -0.06
MSH5-216ENST00000484309 PDE4AP27815 886 aa14.65□□□□□ -0.06
MSH5-216ENST00000484309 ERVK-9P63128 1117 aa14.65□□□□□ -0.06
MSH5-216ENST00000484309 ERVK-24P63145 666 aa14.65□□□□□ -0.06
MSH5-216ENST00000484309 PPARAQ07869 468 aa14.65□□□□□ -0.06
MSH5-216ENST00000484309 MTFR1Q15390 333 aa14.65□□□□□ -0.06
MSH5-216ENST00000484309 Q3C1V9 767 aa14.65□□□□□ -0.06
MSH5-216ENST00000484309 GPRC5AQ8NFJ5 357 aa14.65□□□□□ -0.06
MSH5-216ENST00000484309 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.65□□□□□ -0.06
MSH5-216ENST00000484309 HELLSQ9NRZ9 838 aa14.65□□□□□ -0.06
MSH5-216ENST00000484309 BIN2Q9UBW5 565 aaPredicted RBP14.65□□□□□ -0.06
MSH5-216ENST00000484309 SPDYE16A6NNV3 312 aaPredicted RBP14.64□□□□□ -0.07
MSH5-216ENST00000484309 TNRC18O15417 2968 aaPredicted RBP14.64□□□□□ -0.07
MSH5-216ENST00000484309 ADCY3O60266 1144 aa14.64□□□□□ -0.07
MSH5-216ENST00000484309 CNMDO75829 334 aa14.64□□□□□ -0.07
MSH5-216ENST00000484309 CTDSPL2Q05D32 466 aa14.64□□□□□ -0.07
MSH5-216ENST00000484309 ZNF589Q86UQ0 364 aaPredicted RBP14.64□□□□□ -0.07
MSH5-216ENST00000484309 TMEM106CQ9BVX2 250 aa14.64□□□□□ -0.07
MSH5-216ENST00000484309 PORCNQ9H237 461 aa14.64□□□□□ -0.07
MSH5-216ENST00000484309 OSBPL3Q9H4L5 887 aa14.64□□□□□ -0.07
MSH5-216ENST00000484309 SH2D4AQ9H788 454 aa14.64□□□□□ -0.07
MSH5-216ENST00000484309 VCPKMTQ9H867 229 aa14.64□□□□□ -0.07
MSH5-216ENST00000484309 KANSL2Q9H9L4 492 aa14.64□□□□□ -0.07
MSH5-216ENST00000484309 TMX2Q9Y320 296 aa14.64□□□□□ -0.07
MSH5-216ENST00000484309 EN2P19622 333 aaPredicted RBP14.63□□□□□ -0.07
MSH5-216ENST00000484309 MCMDC2Q4G0Z9 681 aa14.63□□□□□ -0.07
MSH5-216ENST00000484309 FAM47AQ5JRC9 791 aa14.63□□□□□ -0.07
MSH5-216ENST00000484309 CCAR1Q8IX12 1150 aaKnown RBP14.63□□□□□ -0.07
MSH5-216ENST00000484309 ZNF444Q8N0Y2 327 aaPredicted RBP14.63□□□□□ -0.07
MSH5-216ENST00000484309 GTF3C2Q8WUA4 911 aaPredicted RBP14.63□□□□□ -0.07
MSH5-216ENST00000484309 INCENPQ9NQS7 918 aa14.63□□□□□ -0.07
MSH5-216ENST00000484309 BTBD7Q9P203 1132 aa14.63□□□□□ -0.07
MSH5-216ENST00000484309 SDSP20132 328 aa14.62□□□□□ -0.07
MSH5-216ENST00000484309 WDR78Q5VTH9 848 aa14.62□□□□□ -0.07
MSH5-216ENST00000484309 SLAIN1Q8ND83 568 aa14.62□□□□□ -0.07
MSH5-216ENST00000484309 CWC22Q9HCG8 908 aaKnown RBP14.62□□□□□ -0.07
MSH5-216ENST00000484309 RABGAP1Q9Y3P9 1069 aa14.62□□□□□ -0.07
MSH5-216ENST00000484309 TACC3Q9Y6A5 838 aa14.62□□□□□ -0.07
MSH5-216ENST00000484309 CCDC171Q6TFL3 1326 aa14.62□□□□□ -0.07
MSH5-216ENST00000484309 PLXNA1Q9UIW2 1896 aa14.61□□□□□ -0.07
MSH5-216ENST00000484309 WDR46O15213 610 aaKnown RBP14.61□□□□□ -0.07
MSH5-216ENST00000484309 FLOT1O75955 427 aa14.61□□□□□ -0.07
MSH5-216ENST00000484309 INHAP05111 366 aa14.61□□□□□ -0.07
MSH5-216ENST00000484309 SLC3A2P08195 630 aaKnown RBP14.61□□□□□ -0.07
MSH5-216ENST00000484309 CYP2B6P20813 491 aa14.61□□□□□ -0.07
MSH5-216ENST00000484309 PDE4BQ07343 736 aa14.61□□□□□ -0.07
MSH5-216ENST00000484309 IRF5Q13568 498 aa14.61□□□□□ -0.07
MSH5-216ENST00000484309 COG2Q14746 738 aa14.61□□□□□ -0.07
MSH5-216ENST00000484309 CWC27Q6UX04 472 aaKnown RBP14.61□□□□□ -0.07
MSH5-216ENST00000484309 LPAR1Q92633 364 aa14.61□□□□□ -0.07
MSH5-216ENST00000484309 ATG4CQ96DT6 458 aa14.61□□□□□ -0.07
MSH5-216ENST00000484309 CEP95Q96GE4 821 aa14.61□□□□□ -0.07
MSH5-216ENST00000484309 NUP88Q99567 741 aaPredicted RBP14.61□□□□□ -0.07
MSH5-216ENST00000484309 ZNF287Q9HBT7 754 aa14.61□□□□□ -0.07
MSH5-216ENST00000484309 GOPCQ9HD26 462 aa14.61□□□□□ -0.07
MSH5-216ENST00000484309 DIAPH3Q9NSV4 1193 aa14.61□□□□□ -0.07
MSH5-216ENST00000484309 GJD2Q9UKL4 321 aa14.61□□□□□ -0.07
MSH5-216ENST00000484309 FRMPD3Q5JV73 1810 aa14.6□□□□□ -0.07
MSH5-216ENST00000484309 IGKV6D-41A0A0C4DH26 115 aa14.6□□□□□ -0.07
MSH5-216ENST00000484309 TSPY3P0CV98 308 aa14.6□□□□□ -0.07
MSH5-216ENST00000484309 TSPY8P0CW00 308 aa14.6□□□□□ -0.07
MSH5-216ENST00000484309 HSPD1P10809 573 aaKnown RBP14.6□□□□□ -0.07
MSH5-216ENST00000484309 CCL5P13501 91 aa14.6□□□□□ -0.07
MSH5-216ENST00000484309 MAPK4P31152 587 aa14.6□□□□□ -0.07
MSH5-216ENST00000484309 HAND2P61296 217 aa14.6□□□□□ -0.07
MSH5-216ENST00000484309 UBXN2AP68543 259 aa14.6□□□□□ -0.07
MSH5-216ENST00000484309 FAM83BQ5T0W9 1011 aa14.6□□□□□ -0.07
MSH5-216ENST00000484309 GPR142Q7Z601 462 aa14.6□□□□□ -0.07
MSH5-216ENST00000484309 LRRC47Q8N1G4 583 aaKnown RBP14.6□□□□□ -0.07
MSH5-216ENST00000484309 CHMP4CQ96CF2 233 aa14.6□□□□□ -0.07
MSH5-216ENST00000484309 UNC93B1Q9H1C4 597 aa14.6□□□□□ -0.07
MSH5-216ENST00000484309 FBXO28Q9NVF7 368 aa14.6□□□□□ -0.07
MSH5-216ENST00000484309 CLIP2Q9UDT6 1046 aa14.6□□□□□ -0.07
MSH5-216ENST00000484309 FGAP02671 866 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 GSPT1P15170 499 aaKnown RBP14.59□□□□□ -0.07
MSH5-216ENST00000484309 DSG3P32926 999 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 CCNA1P78396 465 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 TFAP4Q01664 338 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 TRIM32Q13049 653 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 PLS1Q14651 629 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 TTC22Q5TAA0 569 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 LBX2Q6XYB7 198 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 PLEKHH3Q7Z736 793 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 NEDD1Q8NHV4 660 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 PXYLP1Q8TE99 480 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 NUDT12Q9BQG2 462 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 RNF208Q9H0X6 261 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 TOMM22Q9NS69 142 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 NYAP2Q9P242 653 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.59□□□□□ -0.07
MSH5-216ENST00000484309 ZNF236Q9UL36 1845 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 PLIN4Q96Q06 1357 aa14.59□□□□□ -0.07
MSH5-216ENST00000484309 NMT2O60551 498 aa14.58□□□□□ -0.08
MSH5-216ENST00000484309 NDUFB10O96000 172 aa14.58□□□□□ -0.08
MSH5-216ENST00000484309 ALX1Q15699 326 aa14.58□□□□□ -0.08
MSH5-216ENST00000484309 RRP12Q5JTH9 1297 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms