RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ARHGEF10LQ9HCE6 1279 aa15.41■□□□□ 0.06
HDAC1-209ENST00000484305 TMX2Q9Y320 296 aa15.41■□□□□ 0.06
HDAC1-209ENST00000484305 PRDM1O75626 825 aa15.4■□□□□ 0.06
HDAC1-209ENST00000484305 CNMDO75829 334 aa15.4■□□□□ 0.06
HDAC1-209ENST00000484305 ELNP15502 786 aa15.4■□□□□ 0.06
HDAC1-209ENST00000484305 EN2P19622 333 aaPredicted RBP15.4■□□□□ 0.06
HDAC1-209ENST00000484305 ATP2B2Q01814 1243 aa15.4■□□□□ 0.06
HDAC1-209ENST00000484305 MTFR1Q15390 333 aa15.4■□□□□ 0.06
HDAC1-209ENST00000484305 SPICE1Q8N0Z3 855 aa15.4■□□□□ 0.06
HDAC1-209ENST00000484305 GTF3C2Q8WUA4 911 aaPredicted RBP15.4■□□□□ 0.06
HDAC1-209ENST00000484305 RILPL2Q969X0 211 aa15.4■□□□□ 0.06
HDAC1-209ENST00000484305 NAPBQ9H115 298 aa15.4■□□□□ 0.06
HDAC1-209ENST00000484305 HELLSQ9NRZ9 838 aa15.4■□□□□ 0.06
HDAC1-209ENST00000484305 GJD2Q9UKL4 321 aa15.4■□□□□ 0.06
HDAC1-209ENST00000484305 PARP14Q460N5 1801 aa15.4■□□□□ 0.06
HDAC1-209ENST00000484305 MYH4Q9Y623 1939 aa15.39■□□□□ 0.05
HDAC1-209ENST00000484305 A0A0D9SFI3 127 aa15.39■□□□□ 0.05
HDAC1-209ENST00000484305 SPDYE16A6NNV3 312 aaPredicted RBP15.39■□□□□ 0.05
HDAC1-209ENST00000484305 NMIQ13287 307 aaPredicted RBP15.39■□□□□ 0.05
HDAC1-209ENST00000484305 IRF5Q13568 498 aa15.39■□□□□ 0.05
HDAC1-209ENST00000484305 VPS53Q5VIR6 699 aa15.39■□□□□ 0.05
HDAC1-209ENST00000484305 LBX2Q6XYB7 198 aa15.39■□□□□ 0.05
HDAC1-209ENST00000484305 SLAIN1Q8ND83 568 aa15.39■□□□□ 0.05
HDAC1-209ENST00000484305 TANGO6Q9C0B7 1094 aa15.39■□□□□ 0.05
HDAC1-209ENST00000484305 PORCNQ9H237 461 aa15.39■□□□□ 0.05
HDAC1-209ENST00000484305 VCPKMTQ9H867 229 aa15.39■□□□□ 0.05
HDAC1-209ENST00000484305 BIN2Q9UBW5 565 aaPredicted RBP15.39■□□□□ 0.05
HDAC1-209ENST00000484305 RABGAP1Q9Y3P9 1069 aa15.39■□□□□ 0.05
HDAC1-209ENST00000484305 PPARAQ07869 468 aa15.38■□□□□ 0.05
HDAC1-209ENST00000484305 TICAM2Q86XR7 235 aa15.38■□□□□ 0.05
HDAC1-209ENST00000484305 PXYLP1Q8TE99 480 aa15.38■□□□□ 0.05
HDAC1-209ENST00000484305 LPAR1Q92633 364 aa15.38■□□□□ 0.05
HDAC1-209ENST00000484305 SH2D4AQ9H788 454 aa15.38■□□□□ 0.05
HDAC1-209ENST00000484305 BTBD7Q9P203 1132 aa15.38■□□□□ 0.05
HDAC1-209ENST00000484305 PDE4DIPQ5VU43 2346 aa15.38■□□□□ 0.05
HDAC1-209ENST00000484305 CCL5P13501 91 aa15.37■□□□□ 0.05
HDAC1-209ENST00000484305 PDE4AP27815 886 aa15.37■□□□□ 0.05
HDAC1-209ENST00000484305 MAPK4P31152 587 aa15.37■□□□□ 0.05
HDAC1-209ENST00000484305 COG2Q14746 738 aa15.37■□□□□ 0.05
HDAC1-209ENST00000484305 MCMDC2Q4G0Z9 681 aa15.37■□□□□ 0.05
HDAC1-209ENST00000484305 ZNF589Q86UQ0 364 aaPredicted RBP15.37■□□□□ 0.05
HDAC1-209ENST00000484305 ZNF444Q8N0Y2 327 aaPredicted RBP15.37■□□□□ 0.05
HDAC1-209ENST00000484305 ZNF287Q9HBT7 754 aa15.37■□□□□ 0.05
HDAC1-209ENST00000484305 HOXC10Q9NYD6 342 aa15.37■□□□□ 0.05
HDAC1-209ENST00000484305 A0A0G2JMZ2 1700 aa15.37■□□□□ 0.05
HDAC1-209ENST00000484305 COL11A1P12107 1806 aaPredicted RBP15.36■□□□□ 0.05
HDAC1-209ENST00000484305 IGKV6D-41A0A0C4DH26 115 aa15.36■□□□□ 0.05
HDAC1-209ENST00000484305 INHAP05111 366 aa15.36■□□□□ 0.05
HDAC1-209ENST00000484305 SDSP20132 328 aa15.36■□□□□ 0.05
HDAC1-209ENST00000484305 UBXN2AP68543 259 aa15.36■□□□□ 0.05
HDAC1-209ENST00000484305 CTDSPL2Q05D32 466 aa15.36■□□□□ 0.05
HDAC1-209ENST00000484305 PDE4BQ07343 736 aa15.36■□□□□ 0.05
HDAC1-209ENST00000484305 GPR142Q7Z601 462 aa15.36■□□□□ 0.05
HDAC1-209ENST00000484305 CCAR1Q8IX12 1150 aaKnown RBP15.36■□□□□ 0.05
HDAC1-209ENST00000484305 UNC93B1Q9H1C4 597 aa15.36■□□□□ 0.05
HDAC1-209ENST00000484305 GOPCQ9HD26 462 aa15.36■□□□□ 0.05
HDAC1-209ENST00000484305 INCENPQ9NQS7 918 aa15.36■□□□□ 0.05
HDAC1-209ENST00000484305 NYAP2Q9P242 653 aa15.36■□□□□ 0.05
HDAC1-209ENST00000484305 WDR46O15213 610 aaKnown RBP15.35■□□□□ 0.05
HDAC1-209ENST00000484305 RAD21O60216 631 aa15.35■□□□□ 0.05
HDAC1-209ENST00000484305 FLOT1O75955 427 aa15.35■□□□□ 0.05
HDAC1-209ENST00000484305 SLC3A2P08195 630 aaKnown RBP15.35■□□□□ 0.05
HDAC1-209ENST00000484305 DSG3P32926 999 aa15.35■□□□□ 0.05
HDAC1-209ENST00000484305 CCNA1P78396 465 aa15.35■□□□□ 0.05
HDAC1-209ENST00000484305 ALX1Q15699 326 aa15.35■□□□□ 0.05
HDAC1-209ENST00000484305 FAM47AQ5JRC9 791 aa15.35■□□□□ 0.05
HDAC1-209ENST00000484305 PLEKHH3Q7Z736 793 aa15.35■□□□□ 0.05
HDAC1-209ENST00000484305 NUDT12Q9BQG2 462 aa15.35■□□□□ 0.05
HDAC1-209ENST00000484305 RNF208Q9H0X6 261 aa15.35■□□□□ 0.05
HDAC1-209ENST00000484305 CLIP2Q9UDT6 1046 aa15.35■□□□□ 0.05
HDAC1-209ENST00000484305 TACC3Q9Y6A5 838 aa15.35■□□□□ 0.05
HDAC1-209ENST00000484305 FGAP02671 866 aa15.34■□□□□ 0.05
HDAC1-209ENST00000484305 HSPD1P10809 573 aaKnown RBP15.34■□□□□ 0.05
HDAC1-209ENST00000484305 CYP2B6P20813 491 aa15.34■□□□□ 0.05
HDAC1-209ENST00000484305 MORN1Q5T089 497 aa15.34■□□□□ 0.05
HDAC1-209ENST00000484305 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
HDAC1-209ENST00000484305 NEDD1Q8NHV4 660 aa15.34■□□□□ 0.05
HDAC1-209ENST00000484305 USP6NLQ92738 828 aa15.34■□□□□ 0.05
HDAC1-209ENST00000484305 ATG4CQ96DT6 458 aa15.34■□□□□ 0.05
HDAC1-209ENST00000484305 CEP95Q96GE4 821 aa15.34■□□□□ 0.05
HDAC1-209ENST00000484305 MTMR4Q9NYA4 1195 aa15.34■□□□□ 0.05
HDAC1-209ENST00000484305 ANAPC4Q9UJX5 808 aa15.34■□□□□ 0.05
HDAC1-209ENST00000484305 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.34■□□□□ 0.05
HDAC1-209ENST00000484305 CCDC171Q6TFL3 1326 aa15.34■□□□□ 0.05
HDAC1-209ENST00000484305 MKI67P46013 3256 aaKnown RBP15.34■□□□□ 0.05
HDAC1-209ENST00000484305 HMGCRP04035 888 aa15.33■□□□□ 0.04
HDAC1-209ENST00000484305 GJB1P08034 283 aa15.33■□□□□ 0.04
HDAC1-209ENST00000484305 TSPY3P0CV98 308 aa15.33■□□□□ 0.04
HDAC1-209ENST00000484305 TSPY8P0CW00 308 aa15.33■□□□□ 0.04
HDAC1-209ENST00000484305 TFAP4Q01664 338 aa15.33■□□□□ 0.04
HDAC1-209ENST00000484305 TRIM32Q13049 653 aa15.33■□□□□ 0.04
HDAC1-209ENST00000484305 FAM83BQ5T0W9 1011 aa15.33■□□□□ 0.04
HDAC1-209ENST00000484305 WDR78Q5VTH9 848 aa15.33■□□□□ 0.04
HDAC1-209ENST00000484305 SOCS4Q8WXH5 440 aa15.33■□□□□ 0.04
HDAC1-209ENST00000484305 TRIB2Q92519 343 aa15.33■□□□□ 0.04
HDAC1-209ENST00000484305 MKL1Q969V6 931 aa15.33■□□□□ 0.04
HDAC1-209ENST00000484305 SHISA4Q96DD7 197 aa15.33■□□□□ 0.04
HDAC1-209ENST00000484305 NUP88Q99567 741 aaPredicted RBP15.33■□□□□ 0.04
HDAC1-209ENST00000484305 MOV10L1Q9BXT6 1211 aaKnown RBP15.33■□□□□ 0.04
HDAC1-209ENST00000484305 CWC22Q9HCG8 908 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms