RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 BBOX1O75936 387 aa7.85□□□□□ -1.15
SEMA3D-204ENST00000484038 ANXA1P04083 346 aa7.85□□□□□ -1.15
SEMA3D-204ENST00000484038 EIF2S2P20042 333 aaKnown RBP7.85□□□□□ -1.15
SEMA3D-204ENST00000484038 SOX10P56693 466 aa7.85□□□□□ -1.15
SEMA3D-204ENST00000484038 DDX46Q7L014 1031 aaKnown RBP7.85□□□□□ -1.15
SEMA3D-204ENST00000484038 USP48Q86UV5 1035 aa7.85□□□□□ -1.15
SEMA3D-204ENST00000484038 SP8Q8IXZ3 490 aa7.85□□□□□ -1.15
SEMA3D-204ENST00000484038 RGL4Q8IZJ4 473 aa7.85□□□□□ -1.15
SEMA3D-204ENST00000484038 ZNF428Q96B54 188 aa7.85□□□□□ -1.15
SEMA3D-204ENST00000484038 PGAP2Q9UHJ9 254 aa7.85□□□□□ -1.15
SEMA3D-204ENST00000484038 TSPYL4Q9UJ04 414 aa7.85□□□□□ -1.15
SEMA3D-204ENST00000484038 ADAMTS8Q9UP79 889 aa7.85□□□□□ -1.15
SEMA3D-204ENST00000484038 MAPK8IP3Q9UPT6 1336 aa7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 YDJCA8MPS7 323 aa7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 ARHGEF15O94989 841 aa7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 PDE4CQ08493 712 aa7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 AIMP1Q12904 312 aaKnown RBP7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 GRAPQ13588 217 aa7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 NFE2L2Q16236 605 aa7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 PROSER3Q2NL68 480 aa7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 TBC1D10BQ4KMP7 808 aaPredicted RBP7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 SLC10A5Q5PT55 438 aa7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 KRT26Q7Z3Y9 468 aa7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 KRT25Q7Z3Z0 450 aa7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 ETFBKMTQ8IXQ9 262 aa7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 GRAPLQ8TC17 118 aaPredicted RBP7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 IGFLR1Q9H665 355 aa7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 AVENQ9NQS1 362 aaPredicted RBP7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 DMGDHQ9UI17 866 aaKnown RBP7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 USP20Q9Y2K6 914 aa7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 LRRC37AA6NMS7 1700 aa7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 TAF1P21675 1872 aa7.84□□□□□ -1.15
SEMA3D-204ENST00000484038 SH3TC1Q8TE82 1336 aa7.84□□□□□ -1.16
SEMA3D-204ENST00000484038 SHISA8B8ZZ34 492 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 ADM5C9JUS6 153 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 EGFRP00533 1210 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 INPP5BP32019 993 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 RGMBQ6NW40 437 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 C1orf229Q6ZS94 237 aaPredicted RBP7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 LRP10Q7Z4F1 713 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 NLRP10Q86W26 655 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 CMTR1Q8N1G2 835 aaKnown RBP7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 C2orf69Q8N8R5 385 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 DBNDD1Q9H9R9 158 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 GBA2Q9HCG7 927 aaPredicted RBP7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 STIM2Q9P246 746 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 TRMT112Q9UI30 125 aaKnown RBP7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 FAM155AB1AL88 458 aaPredicted RBP7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 PSMD14O00487 310 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 TNFRSF10BO14763 440 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 TRPA1O75762 1119 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 ABL1P00519 1130 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 ZNF157P51786 506 aaPredicted RBP7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 CCINQ13939 588 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 HSP90AB3PQ58FF7 597 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 COPS6Q7L5N1 327 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 FCHSD1Q86WN1 690 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 XAGE3Q8WTP9 111 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 DCPSQ96C86 337 aaKnown RBP7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 PLEKHF1Q96S99 279 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 UBE2OQ9C0C9 1292 aaKnown RBP7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 SAGE1Q9NXZ1 904 aa7.83□□□□□ -1.16
SEMA3D-204ENST00000484038 DDX60Q8IY21 1712 aaKnown RBP7.82□□□□□ -1.16
SEMA3D-204ENST00000484038 EPXP11678 715 aa7.82□□□□□ -1.16
SEMA3D-204ENST00000484038 NFKB1P19838 968 aa7.82□□□□□ -1.16
SEMA3D-204ENST00000484038 KIF23Q02241 960 aaPredicted RBP7.82□□□□□ -1.16
SEMA3D-204ENST00000484038 TMC4Q7Z404 712 aa7.82□□□□□ -1.16
SEMA3D-204ENST00000484038 PODNQ7Z5L7 613 aa7.82□□□□□ -1.16
SEMA3D-204ENST00000484038 HELQQ8TDG4 1101 aa7.82□□□□□ -1.16
SEMA3D-204ENST00000484038 GTF3C2Q8WUA4 911 aaPredicted RBP7.82□□□□□ -1.16
SEMA3D-204ENST00000484038 DPF2Q92785 391 aa7.82□□□□□ -1.16
SEMA3D-204ENST00000484038 GGA3Q9NZ52 723 aa7.82□□□□□ -1.16
SEMA3D-204ENST00000484038 KLF15Q9UIH9 416 aa7.82□□□□□ -1.16
SEMA3D-204ENST00000484038 ECE2O60344 883 aa7.81□□□□□ -1.16
SEMA3D-204ENST00000484038 SIN3BO75182 1162 aa7.81□□□□□ -1.16
SEMA3D-204ENST00000484038 ALAS2P22557 587 aa7.81□□□□□ -1.16
SEMA3D-204ENST00000484038 ZAP70P43403 619 aa7.81□□□□□ -1.16
SEMA3D-204ENST00000484038 TCIRG1Q13488 830 aa7.81□□□□□ -1.16
SEMA3D-204ENST00000484038 KIF4BQ2VIQ3 1234 aa7.81□□□□□ -1.16
SEMA3D-204ENST00000484038 RNF186Q9NXI6 227 aa7.81□□□□□ -1.16
SEMA3D-204ENST00000484038 FAM13BQ9NYF5 915 aa7.81□□□□□ -1.16
SEMA3D-204ENST00000484038 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.81□□□□□ -1.16
SEMA3D-204ENST00000484038 AKAP11Q9UKA4 1901 aa7.81□□□□□ -1.16
SEMA3D-204ENST00000484038 COL4A1P02462 1669 aa7.8□□□□□ -1.16
SEMA3D-204ENST00000484038 OPLAHO14841 1288 aa7.8□□□□□ -1.16
SEMA3D-204ENST00000484038 RPS12P25398 132 aaKnown RBP7.8□□□□□ -1.16
SEMA3D-204ENST00000484038 GPSM2P81274 684 aa7.8□□□□□ -1.16
SEMA3D-204ENST00000484038 MTMR3Q13615 1198 aa7.8□□□□□ -1.16
SEMA3D-204ENST00000484038 FAM26DQ5JW98 314 aa7.8□□□□□ -1.16
SEMA3D-204ENST00000484038 CELF1Q92879 486 aaKnown RBP7.8□□□□□ -1.16
SEMA3D-204ENST00000484038 FAM89AQ96GI7 184 aa7.8□□□□□ -1.16
SEMA3D-204ENST00000484038 EYA3Q99504 573 aa7.8□□□□□ -1.16
SEMA3D-204ENST00000484038 GSX2Q9BZM3 304 aa7.8□□□□□ -1.16
SEMA3D-204ENST00000484038 PNNQ9H307 717 aaKnown RBP7.8□□□□□ -1.16
SEMA3D-204ENST00000484038 KCNQ5Q9NR82 932 aa7.8□□□□□ -1.16
SEMA3D-204ENST00000484038 RTL9Q8NET4 1388 aa7.8□□□□□ -1.16
SEMA3D-204ENST00000484038 ASTN2O75129 1339 aaPredicted RBP7.8□□□□□ -1.16
SEMA3D-204ENST00000484038 ELOA3CA0A087WX78 387 aaPredicted RBP7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 ELOA3DA6NLF2 546 aaPredicted RBP7.79□□□□□ -1.16
SEMA3D-204ENST00000484038 RNF225M0QZC1 329 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms