RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 CDC45O75419 566 aa19.63■□□□□ 0.73
HMGN1-214ENST00000482733 PKN2Q16513 984 aaKnown RBP19.63■□□□□ 0.73
HMGN1-214ENST00000482733 CATSPERGQ6ZRH7 1159 aa19.63■□□□□ 0.73
HMGN1-214ENST00000482733 TNS4Q8IZW8 715 aa19.63■□□□□ 0.73
HMGN1-214ENST00000482733 MKL1Q969V6 931 aa19.63■□□□□ 0.73
HMGN1-214ENST00000482733 CEP95Q96GE4 821 aa19.63■□□□□ 0.73
HMGN1-214ENST00000482733 ESYT1Q9BSJ8 1104 aa19.63■□□□□ 0.73
HMGN1-214ENST00000482733 RPAP3Q9H6T3 665 aaPredicted RBP19.63■□□□□ 0.73
HMGN1-214ENST00000482733 INCENPQ9NQS7 918 aa19.63■□□□□ 0.73
HMGN1-214ENST00000482733 WDR46O15213 610 aaKnown RBP19.62■□□□□ 0.73
HMGN1-214ENST00000482733 HERVK_113P62684 666 aa19.62■□□□□ 0.73
HMGN1-214ENST00000482733 LACTBP83111 547 aaPredicted RBP19.62■□□□□ 0.73
HMGN1-214ENST00000482733 FAM110CQ1W6H9 321 aa19.62■□□□□ 0.73
HMGN1-214ENST00000482733 RRP12Q5JTH9 1297 aaKnown RBP19.62■□□□□ 0.73
HMGN1-214ENST00000482733 TBC1D10CQ8IV04 446 aa19.62■□□□□ 0.73
HMGN1-214ENST00000482733 CD99L2Q8TCZ2 262 aa19.62■□□□□ 0.73
HMGN1-214ENST00000482733 P2RX7Q99572 595 aaKnown RBP19.62■□□□□ 0.73
HMGN1-214ENST00000482733 NBPF3Q9H094 633 aa19.62■□□□□ 0.73
HMGN1-214ENST00000482733 CLIP2Q9UDT6 1046 aa19.62■□□□□ 0.73
HMGN1-214ENST00000482733 TACC3Q9Y6A5 838 aa19.62■□□□□ 0.73
HMGN1-214ENST00000482733 MYH8P13535 1937 aa19.62■□□□□ 0.73
HMGN1-214ENST00000482733 GNRH1P01148 92 aa19.61■□□□□ 0.73
HMGN1-214ENST00000482733 PTH1RQ03431 593 aa19.61■□□□□ 0.73
HMGN1-214ENST00000482733 ESR2Q92731 530 aa19.61■□□□□ 0.73
HMGN1-214ENST00000482733 MAP4K1Q92918 833 aa19.61■□□□□ 0.73
HMGN1-214ENST00000482733 EFCC1Q9HA90 598 aa19.61■□□□□ 0.73
HMGN1-214ENST00000482733 TCP11L1Q9NUJ3 509 aa19.61■□□□□ 0.73
HMGN1-214ENST00000482733 ANKRD13CQ8N6S4 541 aa19.6■□□□□ 0.73
HMGN1-214ENST00000482733 KRT23Q9C075 422 aa19.6■□□□□ 0.73
HMGN1-214ENST00000482733 CNNM2Q9H8M5 875 aa19.6■□□□□ 0.73
HMGN1-214ENST00000482733 HOXC10Q9NYD6 342 aa19.6■□□□□ 0.73
HMGN1-214ENST00000482733 TRIM17Q9Y577 477 aa19.6■□□□□ 0.73
HMGN1-214ENST00000482733 GREB1LQ9C091 1923 aaPredicted RBP19.59■□□□□ 0.73
HMGN1-214ENST00000482733 F5H6K3 240 aa19.59■□□□□ 0.73
HMGN1-214ENST00000482733 KLRC3Q07444 240 aa19.59■□□□□ 0.73
HMGN1-214ENST00000482733 COG2Q14746 738 aa19.59■□□□□ 0.73
HMGN1-214ENST00000482733 KIAA1755Q5JYT7 1200 aa19.59■□□□□ 0.73
HMGN1-214ENST00000482733 LBX2Q6XYB7 198 aa19.59■□□□□ 0.73
HMGN1-214ENST00000482733 SPICE1Q8N0Z3 855 aa19.59■□□□□ 0.73
HMGN1-214ENST00000482733 GMCL1P1Q8NEA9 526 aa19.59■□□□□ 0.73
HMGN1-214ENST00000482733 TANGO6Q9C0B7 1094 aa19.59■□□□□ 0.73
HMGN1-214ENST00000482733 MCOLN1Q9GZU1 580 aa19.59■□□□□ 0.73
HMGN1-214ENST00000482733 IL17RBQ9NRM6 502 aa19.59■□□□□ 0.73
HMGN1-214ENST00000482733 MORF4L1Q9UBU8 362 aa19.59■□□□□ 0.73
HMGN1-214ENST00000482733 STX8Q9UNK0 236 aa19.59■□□□□ 0.73
HMGN1-214ENST00000482733 CASP8AP2Q9UKL3 1982 aa19.59■□□□□ 0.73
HMGN1-214ENST00000482733 RAD21O60216 631 aa19.58■□□□□ 0.72
HMGN1-214ENST00000482733 NOVP48745 357 aa19.58■□□□□ 0.72
HMGN1-214ENST00000482733 FCGRTP55899 365 aa19.58■□□□□ 0.72
HMGN1-214ENST00000482733 CCDC178Q5BJE1 867 aa19.58■□□□□ 0.72
HMGN1-214ENST00000482733 OTOP1Q7RTM1 612 aa19.58■□□□□ 0.72
HMGN1-214ENST00000482733 TTC14Q96N46 770 aa19.58■□□□□ 0.72
HMGN1-214ENST00000482733 LSG1Q9H089 658 aaKnown RBP19.58■□□□□ 0.72
HMGN1-214ENST00000482733 RABGAP1Q9Y3P9 1069 aa19.58■□□□□ 0.72
HMGN1-214ENST00000482733 NEDD4P46934 1319 aa19.57■□□□□ 0.72
HMGN1-214ENST00000482733 MYPNQ86TC9 1320 aa19.57■□□□□ 0.72
HMGN1-214ENST00000482733 HOXD10P28358 340 aa19.57■□□□□ 0.72
HMGN1-214ENST00000482733 PSMC4P43686 418 aa19.57■□□□□ 0.72
HMGN1-214ENST00000482733 PRMT2P55345 433 aa19.57■□□□□ 0.72
HMGN1-214ENST00000482733 TRDNQ13061 729 aa19.57■□□□□ 0.72
HMGN1-214ENST00000482733 GPRC5AQ8NFJ5 357 aa19.57■□□□□ 0.72
HMGN1-214ENST00000482733 ANO2Q9NQ90 1003 aa19.57■□□□□ 0.72
HMGN1-214ENST00000482733 RBM8AQ9Y5S9 174 aaKnown RBP19.57■□□□□ 0.72
HMGN1-214ENST00000482733 NMT2O60551 498 aa19.56■□□□□ 0.72
HMGN1-214ENST00000482733 FLOT1O75955 427 aa19.56■□□□□ 0.72
HMGN1-214ENST00000482733 FMNL1O95466 1100 aaPredicted RBP19.56■□□□□ 0.72
HMGN1-214ENST00000482733 NDUFB10O96000 172 aa19.56■□□□□ 0.72
HMGN1-214ENST00000482733 CYP21A2P08686 494 aa19.56■□□□□ 0.72
HMGN1-214ENST00000482733 FBXO46Q6PJ61 603 aaPredicted RBP19.56■□□□□ 0.72
HMGN1-214ENST00000482733 IQCA1Q86XH1 822 aa19.56■□□□□ 0.72
HMGN1-214ENST00000482733 LRRC47Q8N1G4 583 aaKnown RBP19.56■□□□□ 0.72
HMGN1-214ENST00000482733 RBPJLQ9UBG7 517 aa19.56■□□□□ 0.72
HMGN1-214ENST00000482733 SPDYE16A6NNV3 312 aaPredicted RBP19.55■□□□□ 0.72
HMGN1-214ENST00000482733 KDM4AO75164 1064 aa19.55■□□□□ 0.72
HMGN1-214ENST00000482733 TOP1P11387 765 aaKnown RBP19.55■□□□□ 0.72
HMGN1-214ENST00000482733 DSG3P32926 999 aa19.55■□□□□ 0.72
HMGN1-214ENST00000482733 FAM83BQ5T0W9 1011 aa19.55■□□□□ 0.72
HMGN1-214ENST00000482733 SLFN13Q68D06 897 aa19.55■□□□□ 0.72
HMGN1-214ENST00000482733 MB21D1Q8N884 522 aa19.55■□□□□ 0.72
HMGN1-214ENST00000482733 ARHGAP39Q9C0H5 1083 aa19.55■□□□□ 0.72
HMGN1-214ENST00000482733 B4E1Z4 1266 aa19.54■□□□□ 0.72
HMGN1-214ENST00000482733 ERVK-9P63128 1117 aa19.54■□□□□ 0.72
HMGN1-214ENST00000482733 ERVK-24P63145 666 aa19.54■□□□□ 0.72
HMGN1-214ENST00000482733 CCNA1P78396 465 aa19.54■□□□□ 0.72
HMGN1-214ENST00000482733 DGKHQ86XP1 1220 aa19.54■□□□□ 0.72
HMGN1-214ENST00000482733 GMCL1Q96IK5 515 aa19.54■□□□□ 0.72
HMGN1-214ENST00000482733 TRIM47Q96LD4 638 aa19.54■□□□□ 0.72
HMGN1-214ENST00000482733 PAGR1Q9BTK6 254 aa19.54■□□□□ 0.72
HMGN1-214ENST00000482733 TXNRD2Q9NNW7 524 aa19.54■□□□□ 0.72
HMGN1-214ENST00000482733 PTPN22Q9Y2R2 807 aa19.54■□□□□ 0.72
HMGN1-214ENST00000482733 TNPO2O14787 897 aaKnown RBP19.53■□□□□ 0.72
HMGN1-214ENST00000482733 BMP3P12645 472 aa19.53■□□□□ 0.72
HMGN1-214ENST00000482733 CAP1Q01518 475 aa19.53■□□□□ 0.72
HMGN1-214ENST00000482733 CCAR1Q8IX12 1150 aaKnown RBP19.53■□□□□ 0.72
HMGN1-214ENST00000482733 COA7Q96BR5 231 aa19.53■□□□□ 0.72
HMGN1-214ENST00000482733 ZSWIM5Q9P217 1185 aa19.53■□□□□ 0.72
HMGN1-214ENST00000482733 SRRDQ9UH36 339 aa19.53■□□□□ 0.72
HMGN1-214ENST00000482733 PPP1R9AQ9ULJ8 1098 aa19.53■□□□□ 0.72
HMGN1-214ENST00000482733 LAMA4Q16363 1823 aa19.53■□□□□ 0.72
HMGN1-214ENST00000482733 CTGFP29279 349 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms