RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 TXNRD2Q9NNW7 524 aa17.65■□□□□ 0.42
OPTN-210ENST00000482140 RABGAP1Q9Y3P9 1069 aa17.65■□□□□ 0.42
OPTN-210ENST00000482140 RBBP6Q7Z6E9 1792 aaKnown RBP17.65■□□□□ 0.42
OPTN-210ENST00000482140 GREB1LQ9C091 1923 aaPredicted RBP17.64■□□□□ 0.42
OPTN-210ENST00000482140 KIAA0100Q14667 2235 aaKnown RBP17.64■□□□□ 0.42
OPTN-210ENST00000482140 A0A0D9SFI3 127 aa17.64■□□□□ 0.41
OPTN-210ENST00000482140 RAD21O60216 631 aa17.64■□□□□ 0.41
OPTN-210ENST00000482140 ADCY3O60266 1144 aa17.64■□□□□ 0.41
OPTN-210ENST00000482140 PRDM1O75626 825 aa17.64■□□□□ 0.41
OPTN-210ENST00000482140 UBXN2AP68543 259 aa17.64■□□□□ 0.41
OPTN-210ENST00000482140 RBPJLQ9UBG7 517 aa17.64■□□□□ 0.41
OPTN-210ENST00000482140 MYH4Q9Y623 1939 aa17.63■□□□□ 0.41
OPTN-210ENST00000482140 POTEFA5A3E0 1075 aa17.63■□□□□ 0.41
OPTN-210ENST00000482140 PEX10O60683 326 aa17.63■□□□□ 0.41
OPTN-210ENST00000482140 SDSP20132 328 aa17.63■□□□□ 0.41
OPTN-210ENST00000482140 MAPK4P31152 587 aa17.63■□□□□ 0.41
OPTN-210ENST00000482140 MFAP1P55081 439 aaKnown RBP17.63■□□□□ 0.41
OPTN-210ENST00000482140 CCNA1P78396 465 aa17.63■□□□□ 0.41
OPTN-210ENST00000482140 IRF5Q13568 498 aa17.63■□□□□ 0.41
OPTN-210ENST00000482140 COG2Q14746 738 aa17.63■□□□□ 0.41
OPTN-210ENST00000482140 SIAH1Q8IUQ4 282 aa17.63■□□□□ 0.41
OPTN-210ENST00000482140 SPICE1Q8N0Z3 855 aa17.63■□□□□ 0.41
OPTN-210ENST00000482140 DIAPH3Q9NSV4 1193 aa17.63■□□□□ 0.41
OPTN-210ENST00000482140 HOXC10Q9NYD6 342 aa17.63■□□□□ 0.41
OPTN-210ENST00000482140 HTTP42858 3142 aa17.62■□□□□ 0.41
OPTN-210ENST00000482140 SPDYE16A6NNV3 312 aaPredicted RBP17.62■□□□□ 0.41
OPTN-210ENST00000482140 HIP1O00291 1037 aa17.62■□□□□ 0.41
OPTN-210ENST00000482140 WDR46O15213 610 aaKnown RBP17.62■□□□□ 0.41
OPTN-210ENST00000482140 TSPY3P0CV98 308 aa17.62■□□□□ 0.41
OPTN-210ENST00000482140 TSPY8P0CW00 308 aa17.62■□□□□ 0.41
OPTN-210ENST00000482140 VPS53Q5VIR6 699 aa17.62■□□□□ 0.41
OPTN-210ENST00000482140 SAMD1Q6SPF0 538 aaPredicted RBP17.62■□□□□ 0.41
OPTN-210ENST00000482140 LBX2Q6XYB7 198 aa17.62■□□□□ 0.41
OPTN-210ENST00000482140 CCDC171Q6TFL3 1326 aa17.62■□□□□ 0.41
OPTN-210ENST00000482140 FLOT1O75955 427 aa17.61■□□□□ 0.41
OPTN-210ENST00000482140 Q3C1V9 767 aa17.61■□□□□ 0.41
OPTN-210ENST00000482140 KIAA1755Q5JYT7 1200 aa17.61■□□□□ 0.41
OPTN-210ENST00000482140 WDR78Q5VTH9 848 aa17.61■□□□□ 0.41
OPTN-210ENST00000482140 PXYLP1Q8TE99 480 aa17.61■□□□□ 0.41
OPTN-210ENST00000482140 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.61■□□□□ 0.41
OPTN-210ENST00000482140 NYAP2Q9P242 653 aa17.61■□□□□ 0.41
OPTN-210ENST00000482140 FOXP2O15409 715 aa17.6■□□□□ 0.41
OPTN-210ENST00000482140 ELNP15502 786 aa17.6■□□□□ 0.41
OPTN-210ENST00000482140 PDE4AP27815 886 aa17.6■□□□□ 0.41
OPTN-210ENST00000482140 CTDSPL2Q05D32 466 aa17.6■□□□□ 0.41
OPTN-210ENST00000482140 ALX1Q15699 326 aa17.6■□□□□ 0.41
OPTN-210ENST00000482140 ZNF589Q86UQ0 364 aaPredicted RBP17.6■□□□□ 0.41
OPTN-210ENST00000482140 SOCS4Q8WXH5 440 aa17.6■□□□□ 0.41
OPTN-210ENST00000482140 NUDT12Q9BQG2 462 aa17.6■□□□□ 0.41
OPTN-210ENST00000482140 PORCNQ9H237 461 aa17.6■□□□□ 0.41
OPTN-210ENST00000482140 CLIP2Q9UDT6 1046 aa17.6■□□□□ 0.41
OPTN-210ENST00000482140 CNMDO75829 334 aa17.59■□□□□ 0.41
OPTN-210ENST00000482140 HSPD1P10809 573 aaKnown RBP17.59■□□□□ 0.41
OPTN-210ENST00000482140 DSG3P32926 999 aa17.59■□□□□ 0.41
OPTN-210ENST00000482140 TFAP4Q01664 338 aa17.59■□□□□ 0.41
OPTN-210ENST00000482140 MTFR1Q15390 333 aa17.59■□□□□ 0.41
OPTN-210ENST00000482140 FAM47AQ5JRC9 791 aa17.59■□□□□ 0.41
OPTN-210ENST00000482140 POTEEQ6S8J3 1075 aa17.59■□□□□ 0.41
OPTN-210ENST00000482140 CWC27Q6UX04 472 aaKnown RBP17.59■□□□□ 0.41
OPTN-210ENST00000482140 GPR142Q7Z601 462 aa17.59■□□□□ 0.41
OPTN-210ENST00000482140 PLEKHH3Q7Z736 793 aa17.59■□□□□ 0.41
OPTN-210ENST00000482140 MB21D1Q8N884 522 aa17.59■□□□□ 0.41
OPTN-210ENST00000482140 NEDD1Q8NHV4 660 aa17.59■□□□□ 0.41
OPTN-210ENST00000482140 CEP95Q96GE4 821 aa17.59■□□□□ 0.41
OPTN-210ENST00000482140 BTBD7Q9P203 1132 aa17.59■□□□□ 0.41
OPTN-210ENST00000482140 GJD2Q9UKL4 321 aa17.59■□□□□ 0.41
OPTN-210ENST00000482140 RLFQ13129 1914 aa17.59■□□□□ 0.41
OPTN-210ENST00000482140 PLXNB2O15031 1838 aa17.58■□□□□ 0.41
OPTN-210ENST00000482140 PARP14Q460N5 1801 aa17.58■□□□□ 0.41
OPTN-210ENST00000482140 PLIN4Q96Q06 1357 aa17.58■□□□□ 0.4
OPTN-210ENST00000482140 ZMYM6O95789 1325 aa17.58■□□□□ 0.4
OPTN-210ENST00000482140 TSPY2A6NKD2 308 aa17.58■□□□□ 0.4
OPTN-210ENST00000482140 TTLL1O95922 423 aa17.58■□□□□ 0.4
OPTN-210ENST00000482140 FGAP02671 866 aa17.58■□□□□ 0.4
OPTN-210ENST00000482140 INHAP05111 366 aa17.58■□□□□ 0.4
OPTN-210ENST00000482140 CCL5P13501 91 aa17.58■□□□□ 0.4
OPTN-210ENST00000482140 EN2P19622 333 aaPredicted RBP17.58■□□□□ 0.4
OPTN-210ENST00000482140 PPP4R3BQ5MIZ7 849 aa17.58■□□□□ 0.4
OPTN-210ENST00000482140 TTC22Q5TAA0 569 aa17.58■□□□□ 0.4
OPTN-210ENST00000482140 RNF208Q9H0X6 261 aa17.58■□□□□ 0.4
OPTN-210ENST00000482140 TOMM22Q9NS69 142 aa17.58■□□□□ 0.4
OPTN-210ENST00000482140 MTMR4Q9NYA4 1195 aa17.58■□□□□ 0.4
OPTN-210ENST00000482140 ANAPC4Q9UJX5 808 aa17.58■□□□□ 0.4
OPTN-210ENST00000482140 IVNS1ABPQ9Y6Y0 642 aa17.58■□□□□ 0.4
OPTN-210ENST00000482140 CENPFP49454 3210 aa17.57■□□□□ 0.4
OPTN-210ENST00000482140 IGKV6D-41A0A0C4DH26 115 aa17.57■□□□□ 0.4
OPTN-210ENST00000482140 CYP2B6P20813 491 aa17.57■□□□□ 0.4
OPTN-210ENST00000482140 PLS1Q14651 629 aa17.57■□□□□ 0.4
OPTN-210ENST00000482140 FAM83BQ5T0W9 1011 aa17.57■□□□□ 0.4
OPTN-210ENST00000482140 ATG4CQ96DT6 458 aa17.57■□□□□ 0.4
OPTN-210ENST00000482140 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.57■□□□□ 0.4
OPTN-210ENST00000482140 A0A0G2JMZ2 1700 aa17.57■□□□□ 0.4
OPTN-210ENST00000482140 F5H6K3 240 aa17.56■□□□□ 0.4
OPTN-210ENST00000482140 RANBP6O60518 1105 aaKnown RBP17.56■□□□□ 0.4
OPTN-210ENST00000482140 HMGCRP04035 888 aa17.56■□□□□ 0.4
OPTN-210ENST00000482140 RGS2P41220 211 aa17.56■□□□□ 0.4
OPTN-210ENST00000482140 KLRC3Q07444 240 aa17.56■□□□□ 0.4
OPTN-210ENST00000482140 LRRC47Q8N1G4 583 aaKnown RBP17.56■□□□□ 0.4
OPTN-210ENST00000482140 NKX2-3Q8TAU0 364 aa17.56■□□□□ 0.4
OPTN-210ENST00000482140 SPATC1LQ9H0A9 340 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms