RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 TNNQ9UQP3 1299 aa21.18■□□□□ 0.98
RXRB-203ENST00000481441 CDH23Q9H251 3354 aa21.18■□□□□ 0.98
RXRB-203ENST00000481441 COBLO75128 1261 aa21.17■□□□□ 0.98
RXRB-203ENST00000481441 SHCBP1Q8NEM2 672 aa21.17■□□□□ 0.98
RXRB-203ENST00000481441 PRUNE2Q8WUY3 3088 aa21.17■□□□□ 0.98
RXRB-203ENST00000481441 SMCHD1A6NHR9 2005 aa21.16■□□□□ 0.98
RXRB-203ENST00000481441 IDH1O75874 414 aaKnown RBP21.16■□□□□ 0.98
RXRB-203ENST00000481441 FOSL2P15408 326 aa21.16■□□□□ 0.98
RXRB-203ENST00000481441 ADCYAP1R1P41586 468 aa21.16■□□□□ 0.98
RXRB-203ENST00000481441 PLCD1P51178 756 aa21.16■□□□□ 0.98
RXRB-203ENST00000481441 COG2Q14746 738 aa21.16■□□□□ 0.98
RXRB-203ENST00000481441 LRRC41Q15345 812 aa21.16■□□□□ 0.98
RXRB-203ENST00000481441 SPATC1LQ9H0A9 340 aa21.16■□□□□ 0.98
RXRB-203ENST00000481441 HOXC10Q9NYD6 342 aa21.16■□□□□ 0.98
RXRB-203ENST00000481441 DBNLQ9UJU6 430 aaKnown RBP21.16■□□□□ 0.98
RXRB-203ENST00000481441 ZNFX1Q9P2E3 1918 aaKnown RBP21.15■□□□□ 0.98
RXRB-203ENST00000481441 MYCNP04198 464 aaPredicted RBP21.15■□□□□ 0.98
RXRB-203ENST00000481441 ERCC3P19447 782 aa21.15■□□□□ 0.98
RXRB-203ENST00000481441 OS9Q13438 667 aaPredicted RBP21.15■□□□□ 0.98
RXRB-203ENST00000481441 SEPT2Q15019 361 aa21.15■□□□□ 0.98
RXRB-203ENST00000481441 PRAMEF19Q5SWL8 479 aa21.15■□□□□ 0.98
RXRB-203ENST00000481441 MAGEB6Q8N7X4 407 aa21.15■□□□□ 0.98
RXRB-203ENST00000481441 SSH3Q8TE77 659 aa21.15■□□□□ 0.98
RXRB-203ENST00000481441 FERMT2Q96AC1 680 aa21.15■□□□□ 0.98
RXRB-203ENST00000481441 TLR7Q9NYK1 1049 aaKnown RBP21.15■□□□□ 0.98
RXRB-203ENST00000481441 A0A1W2PRG0 241 aa21.14■□□□□ 0.97
RXRB-203ENST00000481441 IPO8O15397 1037 aaKnown RBP21.14■□□□□ 0.97
RXRB-203ENST00000481441 ITGB8P26012 769 aa21.14■□□□□ 0.97
RXRB-203ENST00000481441 FAM47AQ5JRC9 791 aa21.14■□□□□ 0.97
RXRB-203ENST00000481441 NAV1Q8NEY1 1877 aa21.14■□□□□ 0.97
RXRB-203ENST00000481441 TMEM265A0A087WTH1 108 aa21.13■□□□□ 0.97
RXRB-203ENST00000481441 TLE2Q04725 743 aa21.13■□□□□ 0.97
RXRB-203ENST00000481441 GABPAQ06546 454 aa21.13■□□□□ 0.97
RXRB-203ENST00000481441 PARP14Q460N5 1801 aa21.12■□□□□ 0.97
RXRB-203ENST00000481441 SURF6O75683 361 aaKnown RBP21.12■□□□□ 0.97
RXRB-203ENST00000481441 EPHB4P54760 987 aa21.12■□□□□ 0.97
RXRB-203ENST00000481441 ATP8B2P98198 1209 aa21.12■□□□□ 0.97
RXRB-203ENST00000481441 ABRAQ8N0Z2 381 aa21.12■□□□□ 0.97
RXRB-203ENST00000481441 SYMPKQ92797 1274 aaKnown RBP21.12■□□□□ 0.97
RXRB-203ENST00000481441 RIOK1Q9BRS2 568 aaKnown RBP21.12■□□□□ 0.97
RXRB-203ENST00000481441 TANGO6Q9C0B7 1094 aa21.12■□□□□ 0.97
RXRB-203ENST00000481441 CCDC8Q9H0W5 538 aaPredicted RBP21.12■□□□□ 0.97
RXRB-203ENST00000481441 MROH8Q9H579 483 aa21.12■□□□□ 0.97
RXRB-203ENST00000481441 SLC5A4Q9NY91 659 aa21.12■□□□□ 0.97
RXRB-203ENST00000481441 PHF24Q9UPV7 400 aa21.12■□□□□ 0.97
RXRB-203ENST00000481441 TACC3Q9Y6A5 838 aa21.12■□□□□ 0.97
RXRB-203ENST00000481441 TMED8Q6PL24 325 aaPredicted RBP21.11■□□□□ 0.97
RXRB-203ENST00000481441 MB21D1Q8N884 522 aa21.11■□□□□ 0.97
RXRB-203ENST00000481441 CLUAP1Q96AJ1 413 aa21.11■□□□□ 0.97
RXRB-203ENST00000481441 EAF2Q96CJ1 260 aaPredicted RBP21.11■□□□□ 0.97
RXRB-203ENST00000481441 MAML3Q96JK9 1138 aa21.11■□□□□ 0.97
RXRB-203ENST00000481441 RNPC3Q96LT9 517 aaKnown RBP21.11■□□□□ 0.97
RXRB-203ENST00000481441 ANTXR1Q9H6X2 564 aa21.11■□□□□ 0.97
RXRB-203ENST00000481441 DSG3P32926 999 aa21.1■□□□□ 0.97
RXRB-203ENST00000481441 KIAA1755Q5JYT7 1200 aa21.1■□□□□ 0.97
RXRB-203ENST00000481441 NOP58Q9Y2X3 529 aaKnown RBP21.1■□□□□ 0.97
RXRB-203ENST00000481441 KIAA0355O15063 1070 aa21.09■□□□□ 0.97
RXRB-203ENST00000481441 BCAR3O75815 825 aa21.09■□□□□ 0.97
RXRB-203ENST00000481441 CLTBP09497 229 aa21.09■□□□□ 0.97
RXRB-203ENST00000481441 EVX2Q03828 476 aa21.09■□□□□ 0.97
RXRB-203ENST00000481441 MAP3K12Q12852 859 aa21.09■□□□□ 0.97
RXRB-203ENST00000481441 NCAPG2Q86XI2 1143 aa21.09■□□□□ 0.97
RXRB-203ENST00000481441 FRAT1Q92837 279 aaPredicted RBP21.09■□□□□ 0.97
RXRB-203ENST00000481441 XPNPEP3Q9NQH7 507 aa21.09■□□□□ 0.97
RXRB-203ENST00000481441 POLR3DP05423 398 aaPredicted RBP21.08■□□□□ 0.97
RXRB-203ENST00000481441 PLS1Q14651 629 aa21.08■□□□□ 0.97
RXRB-203ENST00000481441 GRIN2CQ14957 1233 aa21.08■□□□□ 0.97
RXRB-203ENST00000481441 TMEM57Q8N5G2 664 aa21.08■□□□□ 0.97
RXRB-203ENST00000481441 NRBP1Q9UHY1 535 aa21.08■□□□□ 0.97
RXRB-203ENST00000481441 PLXNA1Q9UIW2 1896 aa21.08■□□□□ 0.97
RXRB-203ENST00000481441 COL11A1P12107 1806 aaPredicted RBP21.08■□□□□ 0.97
RXRB-203ENST00000481441 MYH8P13535 1937 aa21.08■□□□□ 0.96
RXRB-203ENST00000481441 MPHOSPH10O00566 681 aaKnown RBP21.07■□□□□ 0.96
RXRB-203ENST00000481441 USP38Q8NB14 1042 aa21.07■□□□□ 0.96
RXRB-203ENST00000481441 ATG4CQ96DT6 458 aa21.07■□□□□ 0.96
RXRB-203ENST00000481441 FLOT1O75955 427 aa21.06■□□□□ 0.96
RXRB-203ENST00000481441 RARBP10826 455 aa21.06■□□□□ 0.96
RXRB-203ENST00000481441 FCER1AP12319 257 aa21.06■□□□□ 0.96
RXRB-203ENST00000481441 RAG1P15918 1043 aa21.06■□□□□ 0.96
RXRB-203ENST00000481441 SIAH1Q8IUQ4 282 aa21.06■□□□□ 0.96
RXRB-203ENST00000481441 ROBO3Q96MS0 1386 aa21.06■□□□□ 0.96
RXRB-203ENST00000481441 MAGEB6P1A0A0J9YX57 407 aa21.05■□□□□ 0.96
RXRB-203ENST00000481441 PGK1P00558 417 aa21.05■□□□□ 0.96
RXRB-203ENST00000481441 DNAJB2P25686 324 aa21.05■□□□□ 0.96
RXRB-203ENST00000481441 FPGSQ05932 587 aa21.05■□□□□ 0.96
RXRB-203ENST00000481441 TJAP1Q5JTD0 557 aa21.05■□□□□ 0.96
RXRB-203ENST00000481441 TMEM179Q6ZVK1 233 aa21.05■□□□□ 0.96
RXRB-203ENST00000481441 RNF180Q86T96 592 aa21.05■□□□□ 0.96
RXRB-203ENST00000481441 C1orf115Q9H7X2 142 aa21.05■□□□□ 0.96
RXRB-203ENST00000481441 MCM9Q9NXL9 1143 aa21.05■□□□□ 0.96
RXRB-203ENST00000481441 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.04■□□□□ 0.96
RXRB-203ENST00000481441 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.04■□□□□ 0.96
RXRB-203ENST00000481441 A0A1W2PQ45 241 aaPredicted RBP21.04■□□□□ 0.96
RXRB-203ENST00000481441 A0A1W2PQY0 241 aa21.04■□□□□ 0.96
RXRB-203ENST00000481441 PQBP1O60828 265 aaKnown RBP21.04■□□□□ 0.96
RXRB-203ENST00000481441 TMEM132BQ14DG7 1078 aa21.04■□□□□ 0.96
RXRB-203ENST00000481441 SLC44A5Q8NCS7 719 aa21.04■□□□□ 0.96
RXRB-203ENST00000481441 CRNKL1Q9BZJ0 848 aaKnown RBP21.04■□□□□ 0.96
RXRB-203ENST00000481441 TMX2Q9Y320 296 aa21.04■□□□□ 0.96
RXRB-203ENST00000481441 SLC25A27O95847 323 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms