RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 CA8P35219 290 aa11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 HOXD12P35452 270 aa11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 HDGFP51858 240 aaKnown RBP11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 BPIFB4P59827 614 aa11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 PDCLQ13371 301 aa11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 ADAM9Q13443 819 aa11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 UBE3BQ7Z3V4 1068 aa11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 RSPH3Q86UC2 560 aa11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 LMNTD2Q8IXW0 634 aa11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 ANKRD44Q8N8A2 993 aa11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 RUBCNQ92622 972 aa11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 IFT43Q96FT9 208 aa11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 MAML3Q96JK9 1138 aa11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 NAP1L3Q99457 506 aaPredicted RBP11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 NDST4Q9H3R1 872 aa11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 RABEP2Q9H5N1 569 aa11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 CHMP3Q9Y3E7 222 aa11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 DUOX2Q9NRD8 1548 aa11.54□□□□□ -0.56
PRPF4B-206ENST00000481109 P4HA2O15460 535 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 GSTA2P09210 222 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 NAT2P11245 290 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 ADRA2BP18089 450 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 CNBD1Q8NA66 436 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 C1orf131Q8NDD1 294 aaKnown RBP11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 CTNNBL1Q8WYA6 563 aaPredicted RBP11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 NAF1Q96HR8 494 aaKnown RBP11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 ARHGEF10LQ9HCE6 1279 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 DDX21Q9NR30 783 aaKnown RBP eCLIP11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 RABL2AQ9UBK7 228 aaPredicted RBP11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 ZNF148Q9UQR1 794 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 SPO11Q9Y5K1 396 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 KDM6AO15550 1401 aaPredicted RBP11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 TMEM247A6NEH6 219 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 TOP1P11387 765 aaKnown RBP11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 PDCP20941 246 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 GJB2P29033 226 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 EXOSC9Q06265 439 aaKnown RBP11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 FAAH2Q6GMR7 532 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 CCDC73Q6ZRK6 1079 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 EXOC3L1Q86VI1 746 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 TRIML1Q8N9V2 468 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 SMC6Q96SB8 1091 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 TCHPQ9BT92 498 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 EXOC1Q9NV70 894 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 UBAP1Q9NZ09 502 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 CTNNAL1Q9UBT7 734 aa11.53□□□□□ -0.56
PRPF4B-206ENST00000481109 PPIP5K2O43314 1243 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 USO1O60763 962 aaKnown RBP11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 STAT6P42226 847 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 FAM69CQ0P6D2 419 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 RCN1Q15293 331 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 LONRF3Q496Y0 759 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 SMUG1Q53HV7 270 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 NANOGNBQ7Z5D8 188 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 NCSTNQ92542 709 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 HVCN1Q96D96 273 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 RPGRIP1Q96KN7 1286 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 ZSCAN31Q96LW9 406 aaPredicted RBP11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 SH3GL1Q99961 368 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 SELENOOQ9BVL4 669 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 SH2B1Q9NRF2 756 aaPredicted RBP11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 RNF17Q9BXT8 1623 aaKnown RBP11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 ABCC3O15438 1527 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 CTAGE9A4FU28 777 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 SPDYE5A6NIY4 337 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 BIRC5O15392 142 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 PFDN1O60925 122 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 CDC25CP30307 473 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 HDLBPQ00341 1268 aaKnown RBP11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 ANKRD20A2Q5SQ80 823 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 ANKRD20A1Q5TYW2 823 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 ANKRD20A3Q5VUR7 823 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 ARHGEF25Q86VW2 580 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 DZIP1Q86YF9 867 aaKnown RBP11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 LRRC49Q8IUZ0 686 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 CYFIP2Q96F07 1278 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 DHTKD1Q96HY7 919 aaPredicted RBP11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 FGD4Q96M96 766 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 FAM192AQ9GZU8 254 aa11.52□□□□□ -0.57
PRPF4B-206ENST00000481109 C5orf60A6NFR6 353 aa11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 BAG3O95817 575 aa11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 CLTAP09496 248 aa11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 KCNA2P16389 499 aa11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 EIF2S2P20042 333 aaKnown RBP11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 HOXD10P28358 340 aa11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 CCT8P50990 548 aa11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 ARPC4P59998 168 aa11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 APBA1Q02410 837 aa11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 PDE4BQ07343 736 aa11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 IFI16Q16666 785 aaKnown RBP11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 ANO7Q6IWH7 933 aa11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 HIBCHQ6NVY1 386 aaPredicted RBP11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 ARHGAP18Q8N392 663 aa11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 AGAP11Q8TF27 550 aa11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 PUS3Q9BZE2 481 aaKnown RBP11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 BHMT2Q9H2M3 363 aa11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 VCXQ9H320 206 aa11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 OCEL1Q9H607 264 aa11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 ADCY9O60503 1353 aa11.51□□□□□ -0.57
PRPF4B-206ENST00000481109 WDR46O15213 610 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms