RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 RBM27Q9P2N5 1060 aaKnown RBP18.35■□□□□ 0.53
LIMS3-203ENST00000480744 IVNS1ABPQ9Y6Y0 642 aa18.35■□□□□ 0.53
LIMS3-203ENST00000480744 PARP14Q460N5 1801 aa18.35■□□□□ 0.53
LIMS3-203ENST00000480744 USP17L12C9JPN9 530 aa18.34■□□□□ 0.53
LIMS3-203ENST00000480744 USP17L21D6R901 530 aa18.34■□□□□ 0.53
LIMS3-203ENST00000480744 SMIM22K7EJ46 135 aa18.34■□□□□ 0.53
LIMS3-203ENST00000480744 ICA1Q05084 483 aa18.34■□□□□ 0.53
LIMS3-203ENST00000480744 C12orf60Q5U649 245 aa18.34■□□□□ 0.53
LIMS3-203ENST00000480744 LBX2Q6XYB7 198 aa18.34■□□□□ 0.53
LIMS3-203ENST00000480744 GPATCH3Q96I76 525 aa18.34■□□□□ 0.53
LIMS3-203ENST00000480744 NBPF3Q9H094 633 aa18.34■□□□□ 0.53
LIMS3-203ENST00000480744 A0A0G2JMZ2 1700 aa18.34■□□□□ 0.53
LIMS3-203ENST00000480744 COL11A1P12107 1806 aaPredicted RBP18.33■□□□□ 0.53
LIMS3-203ENST00000480744 SLC15A5A6NIM6 579 aa18.33■□□□□ 0.52
LIMS3-203ENST00000480744 PTPREP23469 700 aa18.33■□□□□ 0.52
LIMS3-203ENST00000480744 CCND3P30281 292 aaPredicted RBP18.33■□□□□ 0.52
LIMS3-203ENST00000480744 CDK8P49336 464 aa18.33■□□□□ 0.52
LIMS3-203ENST00000480744 ATP2B2Q01814 1243 aa18.33■□□□□ 0.52
LIMS3-203ENST00000480744 COG2Q14746 738 aa18.33■□□□□ 0.52
LIMS3-203ENST00000480744 TSHZ3Q63HK5 1081 aa18.33■□□□□ 0.52
LIMS3-203ENST00000480744 SAMD1Q6SPF0 538 aaPredicted RBP18.33■□□□□ 0.52
LIMS3-203ENST00000480744 C7orf61Q8IZ16 206 aa18.33■□□□□ 0.52
LIMS3-203ENST00000480744 SPICE1Q8N0Z3 855 aa18.33■□□□□ 0.52
LIMS3-203ENST00000480744 PUS7LQ9H0K6 701 aaKnown RBP18.33■□□□□ 0.52
LIMS3-203ENST00000480744 C11orf49Q9H6J7 331 aa18.33■□□□□ 0.52
LIMS3-203ENST00000480744 SH2D4AQ9H788 454 aa18.33■□□□□ 0.52
LIMS3-203ENST00000480744 OGDHLQ9ULD0 1010 aa18.33■□□□□ 0.52
LIMS3-203ENST00000480744 KIAA1755Q5JYT7 1200 aa18.32■□□□□ 0.52
LIMS3-203ENST00000480744 CCDC17Q96LX7 622 aa18.32■□□□□ 0.52
LIMS3-203ENST00000480744 DCTPP1Q9H773 170 aa18.32■□□□□ 0.52
LIMS3-203ENST00000480744 HOXC10Q9NYD6 342 aa18.32■□□□□ 0.52
LIMS3-203ENST00000480744 ZNFX1Q9P2E3 1918 aaKnown RBP18.31■□□□□ 0.52
LIMS3-203ENST00000480744 FLOT1O75955 427 aa18.31■□□□□ 0.52
LIMS3-203ENST00000480744 PLS1Q14651 629 aa18.31■□□□□ 0.52
LIMS3-203ENST00000480744 MFSD14CQ5VZR4 134 aa18.31■□□□□ 0.52
LIMS3-203ENST00000480744 CTR9Q6PD62 1173 aa18.31■□□□□ 0.52
LIMS3-203ENST00000480744 C16orf86Q6ZW13 317 aa18.31■□□□□ 0.52
LIMS3-203ENST00000480744 LPAR1Q92633 364 aa18.31■□□□□ 0.52
LIMS3-203ENST00000480744 FLRT1Q9NZU1 646 aa18.31■□□□□ 0.52
LIMS3-203ENST00000480744 RAD21O60216 631 aa18.3■□□□□ 0.52
LIMS3-203ENST00000480744 MNX1P50219 401 aaPredicted RBP18.3■□□□□ 0.52
LIMS3-203ENST00000480744 GRB14Q14449 540 aa18.3■□□□□ 0.52
LIMS3-203ENST00000480744 SIAH1Q8IUQ4 282 aa18.3■□□□□ 0.52
LIMS3-203ENST00000480744 STK11IPQ8N1F8 1099 aa18.3■□□□□ 0.52
LIMS3-203ENST00000480744 MOV10L1Q9BXT6 1211 aaKnown RBP18.3■□□□□ 0.52
LIMS3-203ENST00000480744 SPATC1LQ9H0A9 340 aa18.3■□□□□ 0.52
LIMS3-203ENST00000480744 VCPKMTQ9H867 229 aa18.3■□□□□ 0.52
LIMS3-203ENST00000480744 TMX2Q9Y320 296 aa18.3■□□□□ 0.52
LIMS3-203ENST00000480744 ZNF236Q9UL36 1845 aa18.3■□□□□ 0.52
LIMS3-203ENST00000480744 EEF2P13639 858 aaKnown RBP18.29■□□□□ 0.52
LIMS3-203ENST00000480744 CNGA1P29973 690 aa18.29■□□□□ 0.52
LIMS3-203ENST00000480744 DSG3P32926 999 aa18.29■□□□□ 0.52
LIMS3-203ENST00000480744 DPP9Q86TI2 863 aa18.29■□□□□ 0.52
LIMS3-203ENST00000480744 KBTBD3Q8NAB2 608 aa18.29■□□□□ 0.52
LIMS3-203ENST00000480744 NPLOC4Q8TAT6 608 aa18.29■□□□□ 0.52
LIMS3-203ENST00000480744 ATG4CQ96DT6 458 aa18.29■□□□□ 0.52
LIMS3-203ENST00000480744 STRBPQ96SI9 672 aaKnown RBP18.29■□□□□ 0.52
LIMS3-203ENST00000480744 ARPP21Q9UBL0 812 aaPredicted RBP18.29■□□□□ 0.52
LIMS3-203ENST00000480744 ZMYND8Q9ULU4 1186 aaPredicted RBP18.29■□□□□ 0.52
LIMS3-203ENST00000480744 MYH4Q9Y623 1939 aa18.29■□□□□ 0.52
LIMS3-203ENST00000480744 GREB1LQ9C091 1923 aaPredicted RBP18.28■□□□□ 0.52
LIMS3-203ENST00000480744 ERCC3P19447 782 aa18.28■□□□□ 0.52
LIMS3-203ENST00000480744 LHX8Q68G74 356 aa18.28■□□□□ 0.52
LIMS3-203ENST00000480744 STAP2Q9UGK3 403 aa18.28■□□□□ 0.52
LIMS3-203ENST00000480744 MINDY4BA8MYZ0 360 aa18.27■□□□□ 0.52
LIMS3-203ENST00000480744 WDR46O15213 610 aaKnown RBP18.27■□□□□ 0.52
LIMS3-203ENST00000480744 RNF113AO15541 343 aaKnown RBP18.27■□□□□ 0.52
LIMS3-203ENST00000480744 HOXC6P09630 235 aa18.27■□□□□ 0.52
LIMS3-203ENST00000480744 ADORA2AP29274 412 aa18.27■□□□□ 0.52
LIMS3-203ENST00000480744 CYP2C19P33261 490 aa18.27■□□□□ 0.52
LIMS3-203ENST00000480744 NCAPG2Q86XI2 1143 aa18.27■□□□□ 0.52
LIMS3-203ENST00000480744 MB21D1Q8N884 522 aa18.27■□□□□ 0.52
LIMS3-203ENST00000480744 APPBP2Q92624 585 aa18.27■□□□□ 0.52
LIMS3-203ENST00000480744 OSBP2Q969R2 916 aa18.27■□□□□ 0.52
LIMS3-203ENST00000480744 PRO3102Q9H379 93 aa18.27■□□□□ 0.52
LIMS3-203ENST00000480744 KANSL2Q9H9L4 492 aa18.27■□□□□ 0.52
LIMS3-203ENST00000480744 PLXNA1Q9UIW2 1896 aa18.26■□□□□ 0.51
LIMS3-203ENST00000480744 PFASO15067 1338 aa18.26■□□□□ 0.51
LIMS3-203ENST00000480744 GSG1L2A8MUP6 293 aa18.26■□□□□ 0.51
LIMS3-203ENST00000480744 SYN1P17600 705 aa18.26■□□□□ 0.51
LIMS3-203ENST00000480744 SHCBP1Q8NEM2 672 aa18.26■□□□□ 0.51
LIMS3-203ENST00000480744 MKNK2Q9HBH9 465 aa18.26■□□□□ 0.51
LIMS3-203ENST00000480744 GOPCQ9HD26 462 aa18.26■□□□□ 0.51
LIMS3-203ENST00000480744 PCDHB15Q9Y5E8 787 aa18.26■□□□□ 0.51
LIMS3-203ENST00000480744 STRNO43815 780 aa18.25■□□□□ 0.51
LIMS3-203ENST00000480744 APPP05067 770 aa18.25■□□□□ 0.51
LIMS3-203ENST00000480744 ZFYP08048 801 aaPredicted RBP18.25■□□□□ 0.51
LIMS3-203ENST00000480744 TDO2P48775 406 aa18.25■□□□□ 0.51
LIMS3-203ENST00000480744 MROH8Q9H579 483 aa18.25■□□□□ 0.51
LIMS3-203ENST00000480744 FBXO28Q9NVF7 368 aa18.25■□□□□ 0.51
LIMS3-203ENST00000480744 DDX20Q9UHI6 824 aaKnown RBP18.25■□□□□ 0.51
LIMS3-203ENST00000480744 M0R2C6 588 aa18.24■□□□□ 0.51
LIMS3-203ENST00000480744 GPAA1O43292 621 aa18.24■□□□□ 0.51
LIMS3-203ENST00000480744 SBK1Q52WX2 424 aa18.24■□□□□ 0.51
LIMS3-203ENST00000480744 FAM83BQ5T0W9 1011 aa18.24■□□□□ 0.51
LIMS3-203ENST00000480744 GIMAP6Q6P9H5 292 aa18.24■□□□□ 0.51
LIMS3-203ENST00000480744 SLC5A4Q9NY91 659 aa18.24■□□□□ 0.51
LIMS3-203ENST00000480744 RANBP2P49792 3224 aaKnown RBP18.24■□□□□ 0.51
LIMS3-203ENST00000480744 ERC2O15083 957 aa18.23■□□□□ 0.51
LIMS3-203ENST00000480744 MSCO60682 206 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms