RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 ZKSCAN3Q9BRR0 538 aa14.46□□□□□ -0.09
TRA2B-212ENST00000480461 RNF41Q9H4P4 317 aaPredicted RBP14.46□□□□□ -0.09
TRA2B-212ENST00000480461 ZNF287Q9HBT7 754 aa14.46□□□□□ -0.09
TRA2B-212ENST00000480461 TOMM22Q9NS69 142 aa14.46□□□□□ -0.09
TRA2B-212ENST00000480461 MTMR4Q9NYA4 1195 aa14.46□□□□□ -0.09
TRA2B-212ENST00000480461 SNX14Q9Y5W7 946 aa14.46□□□□□ -0.09
TRA2B-212ENST00000480461 COL6A3P12111 3177 aa14.46□□□□□ -0.1
TRA2B-212ENST00000480461 CXCL11O14625 94 aa14.45□□□□□ -0.1
TRA2B-212ENST00000480461 EPB41L2O43491 1005 aaKnown RBP14.45□□□□□ -0.1
TRA2B-212ENST00000480461 TSPY3P0CV98 308 aa14.45□□□□□ -0.1
TRA2B-212ENST00000480461 TSPY8P0CW00 308 aa14.45□□□□□ -0.1
TRA2B-212ENST00000480461 PCP11498 1178 aaKnown RBP14.45□□□□□ -0.1
TRA2B-212ENST00000480461 ANTXR2P58335 489 aa14.45□□□□□ -0.1
TRA2B-212ENST00000480461 CHST3Q7LGC8 479 aa14.45□□□□□ -0.1
TRA2B-212ENST00000480461 SH3TC2Q8TF17 1288 aa14.45□□□□□ -0.1
TRA2B-212ENST00000480461 BRI3BPQ8WY22 251 aa14.45□□□□□ -0.1
TRA2B-212ENST00000480461 SHISA4Q96DD7 197 aa14.45□□□□□ -0.1
TRA2B-212ENST00000480461 KANSL2Q9H9L4 492 aa14.45□□□□□ -0.1
TRA2B-212ENST00000480461 EMILIN3Q9NT22 766 aa14.45□□□□□ -0.1
TRA2B-212ENST00000480461 TCP11L1Q9NUJ3 509 aa14.45□□□□□ -0.1
TRA2B-212ENST00000480461 TSPY2A6NKD2 308 aa14.44□□□□□ -0.1
TRA2B-212ENST00000480461 BACE1P56817 501 aa14.44□□□□□ -0.1
TRA2B-212ENST00000480461 ARHGEF6Q15052 776 aa14.44□□□□□ -0.1
TRA2B-212ENST00000480461 TAF1CQ15572 869 aaPredicted RBP14.44□□□□□ -0.1
TRA2B-212ENST00000480461 GPAT2Q6NUI2 795 aa14.44□□□□□ -0.1
TRA2B-212ENST00000480461 MB21D2Q8IYB1 491 aaPredicted RBP14.44□□□□□ -0.1
TRA2B-212ENST00000480461 SLC17A8Q8NDX2 589 aa14.44□□□□□ -0.1
TRA2B-212ENST00000480461 ESR2Q92731 530 aa14.44□□□□□ -0.1
TRA2B-212ENST00000480461 MKL1Q969V6 931 aa14.44□□□□□ -0.1
TRA2B-212ENST00000480461 SENP2Q9HC62 589 aa14.44□□□□□ -0.1
TRA2B-212ENST00000480461 ZFYVE28Q9HCC9 887 aa14.44□□□□□ -0.1
TRA2B-212ENST00000480461 GPHNQ9NQX3 736 aaPredicted RBP14.44□□□□□ -0.1
TRA2B-212ENST00000480461 NYAP2Q9P242 653 aa14.44□□□□□ -0.1
TRA2B-212ENST00000480461 CLIP2Q9UDT6 1046 aa14.44□□□□□ -0.1
TRA2B-212ENST00000480461 LAMA3Q16787 3333 aa14.44□□□□□ -0.1
TRA2B-212ENST00000480461 PHIPQ8WWQ0 1821 aa14.43□□□□□ -0.1
TRA2B-212ENST00000480461 A0A0G2JLL6 359 aaPredicted RBP14.43□□□□□ -0.1
TRA2B-212ENST00000480461 USP17L10C9JJH3 530 aa14.43□□□□□ -0.1
TRA2B-212ENST00000480461 CPA1P15085 419 aa14.43□□□□□ -0.1
TRA2B-212ENST00000480461 EXOSC10Q01780 885 aaKnown RBP14.43□□□□□ -0.1
TRA2B-212ENST00000480461 ICA1Q05084 483 aa14.43□□□□□ -0.1
TRA2B-212ENST00000480461 MTMR2Q13614 643 aa14.43□□□□□ -0.1
TRA2B-212ENST00000480461 SH3D19Q5HYK7 790 aa14.43□□□□□ -0.1
TRA2B-212ENST00000480461 PRRT2Q7Z6L0 340 aaPredicted RBP14.43□□□□□ -0.1
TRA2B-212ENST00000480461 IGDCC4Q8TDY8 1250 aa14.43□□□□□ -0.1
TRA2B-212ENST00000480461 BACH2Q9BYV9 841 aa14.43□□□□□ -0.1
TRA2B-212ENST00000480461 KRT23Q9C075 422 aa14.43□□□□□ -0.1
TRA2B-212ENST00000480461 ARHGAP39Q9C0H5 1083 aa14.43□□□□□ -0.1
TRA2B-212ENST00000480461 KIAA1683Q9H0B3 1180 aa14.43□□□□□ -0.1
TRA2B-212ENST00000480461 PRO3102Q9H379 93 aa14.43□□□□□ -0.1
TRA2B-212ENST00000480461 TMX2Q9Y320 296 aa14.43□□□□□ -0.1
TRA2B-212ENST00000480461 PLIN4Q96Q06 1357 aa14.43□□□□□ -0.1
TRA2B-212ENST00000480461 DOCK1Q14185 1865 aa14.42□□□□□ -0.1
TRA2B-212ENST00000480461 CUL9Q8IWT3 2517 aa14.42□□□□□ -0.1
TRA2B-212ENST00000480461 A0A0C4DFX4 3053 aa14.42□□□□□ -0.1
TRA2B-212ENST00000480461 CCL15-CCL14A0A0B4J2E2 113 aa14.42□□□□□ -0.1
TRA2B-212ENST00000480461 GTF2A2P52657 109 aa14.42□□□□□ -0.1
TRA2B-212ENST00000480461 HMGCS2P54868 508 aa14.42□□□□□ -0.1
TRA2B-212ENST00000480461 ATP2B2Q01814 1243 aa14.42□□□□□ -0.1
TRA2B-212ENST00000480461 SNAPC2Q13487 334 aa14.42□□□□□ -0.1
TRA2B-212ENST00000480461 SEC23AQ15436 765 aa14.42□□□□□ -0.1
TRA2B-212ENST00000480461 ZYXQ15942 572 aaKnown RBP14.42□□□□□ -0.1
TRA2B-212ENST00000480461 CCL15Q16663 113 aa14.42□□□□□ -0.1
TRA2B-212ENST00000480461 RNF20Q5VTR2 975 aa14.42□□□□□ -0.1
TRA2B-212ENST00000480461 FAM43AQ8N2R8 423 aa14.42□□□□□ -0.1
TRA2B-212ENST00000480461 NCOA7Q8NI08 942 aa14.42□□□□□ -0.1
TRA2B-212ENST00000480461 ANKS1AQ92625 1134 aa14.42□□□□□ -0.1
TRA2B-212ENST00000480461 CNNM2Q9H8M5 875 aa14.42□□□□□ -0.1
TRA2B-212ENST00000480461 LAMA4Q16363 1823 aa14.41□□□□□ -0.1
TRA2B-212ENST00000480461 GREB1LQ9C091 1923 aaPredicted RBP14.41□□□□□ -0.1
TRA2B-212ENST00000480461 C19orf81C9J6K1 198 aa14.41□□□□□ -0.1
TRA2B-212ENST00000480461 BTBD19C9JJ37 291 aa14.41□□□□□ -0.1
TRA2B-212ENST00000480461 CETPP11597 493 aa14.41□□□□□ -0.1
TRA2B-212ENST00000480461 TREML2Q5T2D2 321 aa14.41□□□□□ -0.1
TRA2B-212ENST00000480461 ENAHQ8N8S7 591 aaPredicted RBP14.41□□□□□ -0.1
TRA2B-212ENST00000480461 TCEANC2Q96MN5 208 aa14.41□□□□□ -0.1
TRA2B-212ENST00000480461 NEK1Q96PY6 1258 aa14.41□□□□□ -0.1
TRA2B-212ENST00000480461 ZSCAN10Q96SZ4 725 aaPredicted RBP14.41□□□□□ -0.1
TRA2B-212ENST00000480461 TMEM47Q9BQJ4 181 aa14.41□□□□□ -0.1
TRA2B-212ENST00000480461 TBC1D2Q9BYX2 928 aa14.41□□□□□ -0.1
TRA2B-212ENST00000480461 AS3MTQ9HBK9 375 aa14.41□□□□□ -0.1
TRA2B-212ENST00000480461 ATAD5Q96QE3 1844 aa14.41□□□□□ -0.1
TRA2B-212ENST00000480461 F5H6K3 240 aa14.4□□□□□ -0.1
TRA2B-212ENST00000480461 TTLL1O95922 423 aa14.4□□□□□ -0.1
TRA2B-212ENST00000480461 ZKSCAN1P17029 563 aaPredicted RBP14.4□□□□□ -0.1
TRA2B-212ENST00000480461 LACTBP83111 547 aaPredicted RBP14.4□□□□□ -0.1
TRA2B-212ENST00000480461 KLRC3Q07444 240 aa14.4□□□□□ -0.1
TRA2B-212ENST00000480461 TRDNQ13061 729 aa14.4□□□□□ -0.1
TRA2B-212ENST00000480461 MTFR1Q15390 333 aa14.4□□□□□ -0.1
TRA2B-212ENST00000480461 POTEEQ6S8J3 1075 aa14.4□□□□□ -0.1
TRA2B-212ENST00000480461 RASGRP2Q7LDG7 609 aa14.4□□□□□ -0.1
TRA2B-212ENST00000480461 LRRC47Q8N1G4 583 aaKnown RBP14.4□□□□□ -0.1
TRA2B-212ENST00000480461 DPF3Q92784 378 aa14.4□□□□□ -0.1
TRA2B-212ENST00000480461 CHMP4CQ96CF2 233 aa14.4□□□□□ -0.1
TRA2B-212ENST00000480461 IL17RAQ96F46 866 aa14.4□□□□□ -0.1
TRA2B-212ENST00000480461 JAKMIP1Q96N16 626 aaKnown RBP14.4□□□□□ -0.1
TRA2B-212ENST00000480461 TTC14Q96N46 770 aa14.4□□□□□ -0.1
TRA2B-212ENST00000480461 KIF2CQ99661 725 aa14.4□□□□□ -0.1
TRA2B-212ENST00000480461 LRRC2Q9BYS8 371 aa14.4□□□□□ -0.1
TRA2B-212ENST00000480461 STX8Q9UNK0 236 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms