RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 NCBP1Q09161 790 aaKnown RBP6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 MTX1Q13505 466 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 ANKRD35Q8N283 1001 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 CCDC197Q8NCU1 140 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 CTTNBP2NLQ9P2B4 639 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 ASIC3Q9UHC3 531 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 PCDHA5Q9Y5H7 936 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 CAPN7Q9Y6W3 813 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 RFX7Q2KHR2 1363 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 ATP5HO75947 161 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 PARP1P09874 1014 aaKnown RBP6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 SKIP12755 728 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 MXD3Q9BW11 206 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 FAM96AQ9H5X1 160 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 MRVI1Q9Y6F6 885 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 IFNAR1P17181 557 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 PHBP35232 272 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 LIFRP42702 1097 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 HERC4Q5GLZ8 1057 aaPredicted RBP6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 CCDC63Q8NA47 563 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 FBXO41Q8TF61 875 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 TRIM11Q96F44 468 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 IFT122Q9HBG6 1241 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 PCDHB13Q9Y5F0 798 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 ARHGEF10O15013 1369 aa6.8□□□□□ -1.32
PRPF4B-205ENST00000480058 CCDC160A6NGH7 325 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 RNMTO43148 476 aaKnown RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 STK10O94804 968 aaKnown RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 GCFC2P16383 781 aaKnown RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 BIRC3Q13489 604 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 MAK16Q9BXY0 300 aaKnown RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 DMRT2Q9Y5R5 561 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 HPDP32754 393 aaPredicted RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 SLC8A3P57103 927 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 NR1H3Q13133 447 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 PCDHA7Q9UN72 937 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 C6orf229H3BNL8 230 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 FOXP2O15409 715 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 TFCP2Q12800 502 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 ORC2Q13416 577 aaPredicted RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 DRP2Q13474 957 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 CDC37Q16543 378 aaPredicted RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 ME3Q16798 604 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 PPP1R21Q6ZMI0 780 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 TTLL7Q6ZT98 887 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 REXO1Q8N1G1 1221 aaKnown RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 CACTINQ8WUQ7 758 aaKnown RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 TCHPQ9BT92 498 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 MCM9Q9NXL9 1143 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 YTHDC2Q9H6S0 1430 aaKnown RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 WDR19Q8NEZ3 1342 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 PLEKHG1Q9ULL1 1385 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 GADD45BO75293 160 aaPredicted RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 PRPF6O94906 941 aaKnown RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 EEF2P13639 858 aaKnown RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 GCKP35557 465 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 CUL1Q13616 776 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 SNCBQ16143 134 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 CDC37L1Q7L3B6 337 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 MYOCDQ8IZQ8 938 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 BPIFA3Q9BQP9 254 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 PHF23Q9BUL5 403 aaPredicted RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 MOV10L1Q9BXT6 1211 aaKnown RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 HAUS2Q9NVX0 235 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 STK17AQ9UEE5 414 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 MID2Q9UJV3 735 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 RABGAP1Q9Y3P9 1069 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 COMMD10Q9Y6G5 202 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 PPFIA2O75334 1257 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 ANXA13P27216 316 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 FKBP3Q00688 224 aaKnown RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 ARL6IP4Q66PJ3 421 aaKnown RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 ZNF790Q6PG37 636 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 ALDH8A1Q9H2A2 487 aaPredicted RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 BATF3Q9NR55 127 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 FGFR1OP2Q9NVK5 253 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 LCMT1Q9UIC8 334 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 DNM3Q9UQ16 869 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 SAMM50Q9Y512 469 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 V9GY48 417 aaPredicted RBP6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 YEATS2Q9ULM3 1422 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 MROH5Q6ZUA9 1318 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 PASKQ96RG2 1323 aa6.79□□□□□ -1.32
PRPF4B-205ENST00000480058 KIF1CO43896 1103 aaKnown RBP6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 MBD4O95243 580 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 IBSPP21815 317 aaPredicted RBP6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 PBKQ96KB5 322 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 C19orf44Q9H6X5 657 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 VIPAS39Q9H9C1 493 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 IRS4O14654 1257 aaPredicted RBP6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 KRT15P19012 456 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 POLR2BP30876 1174 aaKnown RBP6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 MAPK8IP2Q13387 824 aaPredicted RBP6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 VSTM4Q8IW00 320 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 CCDC144CPQ8IYA2 1237 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 BANK1Q8NDB2 785 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 TPCN1Q9ULQ1 816 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 DIS3Q9Y2L1 958 aaKnown RBP6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 DAAM1Q9Y4D1 1078 aa6.78□□□□□ -1.32
PRPF4B-205ENST00000480058 NESP48681 1621 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms