RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 TATDN1Q6P1N9 297 aa12.72□□□□□ -0.37
VTI1A-204ENST00000480057 NOSTRINQ8IVI9 506 aa12.72□□□□□ -0.37
VTI1A-204ENST00000480057 LINC00301Q8NCQ3 95 aa12.72□□□□□ -0.37
VTI1A-204ENST00000480057 ZBED3Q96IU2 234 aaPredicted RBP12.72□□□□□ -0.37
VTI1A-204ENST00000480057 PRMT6Q96LA8 375 aaPredicted RBP12.72□□□□□ -0.37
VTI1A-204ENST00000480057 PHF20Q9BVI0 1012 aa12.72□□□□□ -0.37
VTI1A-204ENST00000480057 BRMS1Q9HCU9 246 aa12.72□□□□□ -0.37
VTI1A-204ENST00000480057 DDX19AQ9NUU7 478 aaKnown RBP12.72□□□□□ -0.37
VTI1A-204ENST00000480057 MAD2L2Q9UI95 211 aa12.72□□□□□ -0.37
VTI1A-204ENST00000480057 HERC5Q9UII4 1024 aaKnown RBP12.72□□□□□ -0.37
VTI1A-204ENST00000480057 SYNPO2Q9UMS6 1093 aa12.72□□□□□ -0.37
VTI1A-204ENST00000480057 V9GY48 417 aaPredicted RBP12.72□□□□□ -0.37
VTI1A-204ENST00000480057 SNHG28P0DPA3 235 aa12.71□□□□□ -0.37
VTI1A-204ENST00000480057 AKR1B1P15121 316 aa12.71□□□□□ -0.37
VTI1A-204ENST00000480057 CALML3P27482 149 aa12.71□□□□□ -0.37
VTI1A-204ENST00000480057 CXCL9Q07325 125 aa12.71□□□□□ -0.37
VTI1A-204ENST00000480057 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.37
VTI1A-204ENST00000480057 ASPRV1Q53RT3 343 aa12.71□□□□□ -0.37
VTI1A-204ENST00000480057 ANO1Q5XXA6 986 aa12.71□□□□□ -0.37
VTI1A-204ENST00000480057 GALNT17Q6IS24 598 aa12.71□□□□□ -0.37
VTI1A-204ENST00000480057 LRSAM1Q6UWE0 723 aa12.71□□□□□ -0.37
VTI1A-204ENST00000480057 FAM83AQ86UY5 434 aa12.71□□□□□ -0.37
VTI1A-204ENST00000480057 DIS3L2Q8IYB7 885 aaKnown RBP12.71□□□□□ -0.37
VTI1A-204ENST00000480057 JMYQ8N9B5 988 aa12.71□□□□□ -0.37
VTI1A-204ENST00000480057 FAM151AQ8WW52 585 aa12.71□□□□□ -0.37
VTI1A-204ENST00000480057 PGBD1Q96JS3 809 aa12.71□□□□□ -0.37
VTI1A-204ENST00000480057 TRIM34Q9BYJ4 488 aa12.71□□□□□ -0.37
VTI1A-204ENST00000480057 TDRD3Q9H7E2 651 aaKnown RBP12.71□□□□□ -0.37
VTI1A-204ENST00000480057 GJB4Q9NTQ9 266 aa12.71□□□□□ -0.37
VTI1A-204ENST00000480057 DDTLA6NHG4 134 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-204ENST00000480057 hCG_1984214I3L0E3 225 aa12.7□□□□□ -0.38
VTI1A-204ENST00000480057 MYO1BO43795 1136 aa12.7□□□□□ -0.38
VTI1A-204ENST00000480057 PPP6R2O75170 966 aa12.7□□□□□ -0.38
VTI1A-204ENST00000480057 PARP1P09874 1014 aaKnown RBP12.7□□□□□ -0.38
VTI1A-204ENST00000480057 KRT2P35908 639 aa12.7□□□□□ -0.38
VTI1A-204ENST00000480057 ZNF280AP59817 542 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-204ENST00000480057 SLC39A14Q15043 492 aa12.7□□□□□ -0.38
VTI1A-204ENST00000480057 STK38Q15208 465 aa12.7□□□□□ -0.38
VTI1A-204ENST00000480057 ADALQ6DHV7 355 aa12.7□□□□□ -0.38
VTI1A-204ENST00000480057 SH3BP5LQ7L8J4 393 aa12.7□□□□□ -0.38
VTI1A-204ENST00000480057 CMTR1Q8N1G2 835 aaKnown RBP12.7□□□□□ -0.38
VTI1A-204ENST00000480057 ZNF713Q8N859 430 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-204ENST00000480057 MKL1Q969V6 931 aa12.7□□□□□ -0.38
VTI1A-204ENST00000480057 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.7□□□□□ -0.38
VTI1A-204ENST00000480057 NYAP2Q9P242 653 aa12.7□□□□□ -0.38
VTI1A-204ENST00000480057 ZNF70Q9UC06 446 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-204ENST00000480057 BCS1LQ9Y276 419 aa12.7□□□□□ -0.38
VTI1A-204ENST00000480057 PCDHAC2Q9Y5I4 1007 aa12.7□□□□□ -0.38
VTI1A-204ENST00000480057 KLRF2D3W0D1 207 aa12.69□□□□□ -0.38
VTI1A-204ENST00000480057 UBE2Q2LH0YL09 131 aa12.69□□□□□ -0.38
VTI1A-204ENST00000480057 SPTLC2O15270 562 aa12.69□□□□□ -0.38
VTI1A-204ENST00000480057 TBC1D12O60347 775 aa12.69□□□□□ -0.38
VTI1A-204ENST00000480057 BMP15O95972 392 aa12.69□□□□□ -0.38
VTI1A-204ENST00000480057 TCP10Q12799 353 aa12.69□□□□□ -0.38
VTI1A-204ENST00000480057 CERKLQ49MI3 558 aaPredicted RBP12.69□□□□□ -0.38
VTI1A-204ENST00000480057 TMEM179Q6ZVK1 233 aa12.69□□□□□ -0.38
VTI1A-204ENST00000480057 ZSCAN29Q8IWY8 852 aaPredicted RBP12.69□□□□□ -0.38
VTI1A-204ENST00000480057 ZFPM1Q8IX07 1006 aa12.69□□□□□ -0.38
VTI1A-204ENST00000480057 CCDC82Q8N4S0 544 aa12.69□□□□□ -0.38
VTI1A-204ENST00000480057 DAGLBQ8NCG7 672 aa12.69□□□□□ -0.38
VTI1A-204ENST00000480057 CCDC148Q8NFR7 591 aa12.69□□□□□ -0.38
VTI1A-204ENST00000480057 BICD2Q8TD16 824 aa12.69□□□□□ -0.38
VTI1A-204ENST00000480057 DPF2Q92785 391 aa12.69□□□□□ -0.38
VTI1A-204ENST00000480057 DNAJC18Q9H819 358 aa12.69□□□□□ -0.38
VTI1A-204ENST00000480057 KANSL2Q9H9L4 492 aa12.69□□□□□ -0.38
VTI1A-204ENST00000480057 SPON1Q9HCB6 807 aa12.69□□□□□ -0.38
VTI1A-204ENST00000480057 PPP1R1BQ9UD71 204 aaPredicted RBP12.69□□□□□ -0.38
VTI1A-204ENST00000480057 BTBD18B2RXH4 712 aa12.68□□□□□ -0.38
VTI1A-204ENST00000480057 FZD9O00144 591 aa12.68□□□□□ -0.38
VTI1A-204ENST00000480057 PDHBP11177 359 aa12.68□□□□□ -0.38
VTI1A-204ENST00000480057 ME1P48163 572 aa12.68□□□□□ -0.38
VTI1A-204ENST00000480057 TRAPPC10P48553 1259 aa12.68□□□□□ -0.38
VTI1A-204ENST00000480057 CACNB3P54284 484 aa12.68□□□□□ -0.38
VTI1A-204ENST00000480057 EIF6P56537 245 aaKnown RBP12.68□□□□□ -0.38
VTI1A-204ENST00000480057 SF3A1Q15459 793 aaKnown RBP12.68□□□□□ -0.38
VTI1A-204ENST00000480057 GPATCH4Q5T3I0 446 aaKnown RBP12.68□□□□□ -0.38
VTI1A-204ENST00000480057 STAG2Q8N3U4 1231 aa12.68□□□□□ -0.38
VTI1A-204ENST00000480057 CCDC12Q8WUD4 166 aaPredicted RBP12.68□□□□□ -0.38
VTI1A-204ENST00000480057 RIOX1Q9H6W3 641 aa12.68□□□□□ -0.38
VTI1A-204ENST00000480057 GRPEL1Q9HAV7 217 aa12.68□□□□□ -0.38
VTI1A-204ENST00000480057 VPS54Q9P1Q0 977 aa12.68□□□□□ -0.38
VTI1A-204ENST00000480057 KCNJ14Q9UNX9 436 aa12.68□□□□□ -0.38
VTI1A-204ENST00000480057 CEP131Q9UPN4 1083 aa12.68□□□□□ -0.38
VTI1A-204ENST00000480057 CLIC4Q9Y696 253 aa12.68□□□□□ -0.38
VTI1A-204ENST00000480057 SYCE3A1L190 88 aa12.67□□□□□ -0.38
VTI1A-204ENST00000480057 PSDA5PKW4 1024 aaPredicted RBP12.67□□□□□ -0.38
VTI1A-204ENST00000480057 CTAGE5O15320 804 aa12.67□□□□□ -0.38
VTI1A-204ENST00000480057 LIG1P18858 919 aa12.67□□□□□ -0.38
VTI1A-204ENST00000480057 TNNI2P48788 182 aa12.67□□□□□ -0.38
VTI1A-204ENST00000480057 CEBPZQ03701 1054 aaKnown RBP12.67□□□□□ -0.38
VTI1A-204ENST00000480057 PTPAQ15257 358 aa12.67□□□□□ -0.38
VTI1A-204ENST00000480057 CCDC73Q6ZRK6 1079 aa12.67□□□□□ -0.38
VTI1A-204ENST00000480057 GAS2L3Q86XJ1 694 aa12.67□□□□□ -0.38
VTI1A-204ENST00000480057 TNFRSF25Q93038 417 aa12.67□□□□□ -0.38
VTI1A-204ENST00000480057 RRP36Q96EU6 259 aaKnown RBP12.67□□□□□ -0.38
VTI1A-204ENST00000480057 FTOQ9C0B1 505 aaKnown RBP eCLIP12.67□□□□□ -0.38
VTI1A-204ENST00000480057 NUP62CLQ9H1M0 184 aa12.67□□□□□ -0.38
VTI1A-204ENST00000480057 CLSTN2Q9H4D0 955 aa12.67□□□□□ -0.38
VTI1A-204ENST00000480057 MYOZ2Q9NPC6 264 aa12.67□□□□□ -0.38
VTI1A-204ENST00000480057 BARHL2Q9NY43 387 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms