RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 GRAPLQ8TC17 118 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF8-204ENST00000479933 TNFRSF25Q93038 417 aa21.8■■□□□ 1.08
TNFRSF8-204ENST00000479933 CCP110O43303 1012 aa21.79■■□□□ 1.08
TNFRSF8-204ENST00000479933 LDHBP07195 334 aaKnown RBP21.79■■□□□ 1.08
TNFRSF8-204ENST00000479933 AMOTL1Q8IY63 956 aa21.79■■□□□ 1.08
TNFRSF8-204ENST00000479933 SPATA20Q8TB22 786 aa21.79■■□□□ 1.08
TNFRSF8-204ENST00000479933 ENOX1Q8TC92 643 aaKnown RBP21.79■■□□□ 1.08
TNFRSF8-204ENST00000479933 FEZ2Q9UHY8 353 aaPredicted RBP21.79■■□□□ 1.08
TNFRSF8-204ENST00000479933 SBF2Q86WG5 1849 aa21.79■■□□□ 1.08
TNFRSF8-204ENST00000479933 FOXN1O15353 648 aa21.79■■□□□ 1.08
TNFRSF8-204ENST00000479933 SCG2P13521 617 aa21.79■■□□□ 1.08
TNFRSF8-204ENST00000479933 CFAP100Q494V2 611 aa21.79■■□□□ 1.08
TNFRSF8-204ENST00000479933 TRAPPC3LQ5T215 181 aa21.79■■□□□ 1.08
TNFRSF8-204ENST00000479933 SRBD1Q8N5C6 995 aaKnown RBP21.79■■□□□ 1.08
TNFRSF8-204ENST00000479933 YY1AP1Q9H869 796 aa21.79■■□□□ 1.08
TNFRSF8-204ENST00000479933 FANCLQ9NW38 375 aa21.79■■□□□ 1.08
TNFRSF8-204ENST00000479933 MCM9Q9NXL9 1143 aa21.79■■□□□ 1.08
TNFRSF8-204ENST00000479933 ANKIB1Q9P2G1 1089 aa21.79■■□□□ 1.08
TNFRSF8-204ENST00000479933 USP27XA6NNY8 438 aa21.78■■□□□ 1.08
TNFRSF8-204ENST00000479933 BMP6P22004 513 aa21.78■■□□□ 1.08
TNFRSF8-204ENST00000479933 C15orf52Q6ZUT6 534 aaKnown RBP21.78■■□□□ 1.08
TNFRSF8-204ENST00000479933 DGKHQ86XP1 1220 aa21.78■■□□□ 1.08
TNFRSF8-204ENST00000479933 CERS3Q8IU89 383 aa21.78■■□□□ 1.08
TNFRSF8-204ENST00000479933 VSTM4Q8IW00 320 aa21.78■■□□□ 1.08
TNFRSF8-204ENST00000479933 PYM1Q9BRP8 204 aaKnown RBP21.78■■□□□ 1.08
TNFRSF8-204ENST00000479933 BAG3O95817 575 aa21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 CALML3P27482 149 aa21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 ERCC5P28715 1186 aaPredicted RBP21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 PFKFB3Q16875 520 aaPredicted RBP21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 FAM47AQ5JRC9 791 aa21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 TTC38Q5R3I4 469 aa21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 ZNF804AQ7Z570 1209 aa21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 TXNRD3Q86VQ6 643 aa21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 ANKS1AQ92625 1134 aa21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 USP21Q9UK80 565 aa21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 XDHP47989 1333 aa21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 ROBO3Q96MS0 1386 aa21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 LDHCP07864 332 aa21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 CYP2D6P10635 497 aa21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 NAA30Q147X3 362 aaPredicted RBP21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 C12orf60Q5U649 245 aa21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 KAT14Q9H8E8 782 aa21.77■■□□□ 1.08
TNFRSF8-204ENST00000479933 FAM205CA6NFA0 338 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 PRR29P0C7W0 189 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 CHRM1P11229 460 aaPredicted RBP21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 USP5P45974 858 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 NPY5RQ15761 445 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 MUM1L1Q5H9M0 696 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 CCDC24Q8N4L8 307 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 PDILTQ8N807 584 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 TRIM34Q9BYJ4 488 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 SH3GLB2Q9NR46 395 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 hCG_1642624A0A1W2PR95 340 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 NMT2O60551 498 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 TOP1P11387 765 aaKnown RBP21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 ADRA2BP18089 450 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 GNAQP50148 359 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 NLRP5P59047 1200 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 PPP4CP60510 307 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 ATP2C1P98194 919 aaPredicted RBP21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 EARS2Q5JPH6 523 aaKnown RBP21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 FBXO38Q6PIJ6 1188 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 TEX2Q8IWB9 1127 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 CNBD1Q8NA66 436 aa21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 MKRN1Q9UHC7 482 aaKnown RBP21.76■■□□□ 1.07
TNFRSF8-204ENST00000479933 PLCD1P51178 756 aa21.75■■□□□ 1.07
TNFRSF8-204ENST00000479933 BMS1Q14692 1282 aaKnown RBP21.75■■□□□ 1.07
TNFRSF8-204ENST00000479933 RCSD1Q6JBY9 416 aa21.75■■□□□ 1.07
TNFRSF8-204ENST00000479933 TRMT1Q9NXH9 659 aaKnown RBP21.75■■□□□ 1.07
TNFRSF8-204ENST00000479933 ERICH4A6NGS2 130 aa21.74■■□□□ 1.07
TNFRSF8-204ENST00000479933 E4F1Q66K89 784 aaPredicted RBP21.74■■□□□ 1.07
TNFRSF8-204ENST00000479933 USP49Q70CQ1 688 aa21.74■■□□□ 1.07
TNFRSF8-204ENST00000479933 SH3RF1Q7Z6J0 888 aa21.74■■□□□ 1.07
TNFRSF8-204ENST00000479933 ZNF592Q92610 1267 aa21.74■■□□□ 1.07
TNFRSF8-204ENST00000479933 DPF2Q92785 391 aa21.74■■□□□ 1.07
TNFRSF8-204ENST00000479933 DHX58Q96C10 678 aa21.74■■□□□ 1.07
TNFRSF8-204ENST00000479933 SPATA31A6Q5VVP1 1343 aa21.74■■□□□ 1.07
TNFRSF8-204ENST00000479933 NAV1Q8NEY1 1877 aa21.74■■□□□ 1.07
TNFRSF8-204ENST00000479933 ZNF18P17022 549 aa21.74■■□□□ 1.07
TNFRSF8-204ENST00000479933 TFAP4Q01664 338 aa21.74■■□□□ 1.07
TNFRSF8-204ENST00000479933 SYMPKQ92797 1274 aaKnown RBP21.74■■□□□ 1.07
TNFRSF8-204ENST00000479933 TCP11L1Q9NUJ3 509 aa21.74■■□□□ 1.07
TNFRSF8-204ENST00000479933 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.74■■□□□ 1.07
TNFRSF8-204ENST00000479933 NFE2L3Q9Y4A8 694 aa21.74■■□□□ 1.07
TNFRSF8-204ENST00000479933 USP17L8P0C7I0 530 aa21.73■■□□□ 1.07
TNFRSF8-204ENST00000479933 HNRNPH2P55795 449 aaKnown RBP21.73■■□□□ 1.07
TNFRSF8-204ENST00000479933 NFIXQ14938 502 aa21.73■■□□□ 1.07
TNFRSF8-204ENST00000479933 ZNF174Q15697 407 aa21.73■■□□□ 1.07
TNFRSF8-204ENST00000479933 FCHSD1Q86WN1 690 aa21.73■■□□□ 1.07
TNFRSF8-204ENST00000479933 FAM177A1Q8N128 213 aaPredicted RBP21.73■■□□□ 1.07
TNFRSF8-204ENST00000479933 GSDMAQ96QA5 445 aa21.73■■□□□ 1.07
TNFRSF8-204ENST00000479933 UBAP1LF5GYI3 381 aa21.73■■□□□ 1.07
TNFRSF8-204ENST00000479933 EVX2Q03828 476 aa21.73■■□□□ 1.07
TNFRSF8-204ENST00000479933 AMIGO3Q86WK7 504 aa21.73■■□□□ 1.07
TNFRSF8-204ENST00000479933 EPSTI1Q96J88 318 aa21.73■■□□□ 1.07
TNFRSF8-204ENST00000479933 ZNF287Q9HBT7 754 aa21.73■■□□□ 1.07
TNFRSF8-204ENST00000479933 ZNF215Q9UL58 517 aaPredicted RBP21.73■■□□□ 1.07
TNFRSF8-204ENST00000479933 H2AFXP16104 143 aaPredicted RBP21.72■■□□□ 1.07
TNFRSF8-204ENST00000479933 PTGDRQ13258 359 aa21.72■■□□□ 1.07
TNFRSF8-204ENST00000479933 GRAMD1CQ8IYS0 662 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms