RNA–Protein interactions for RNA: ENST00000479487.1

ATRX-205, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-205ENST00000479487 CDCP2Q5VXM1 449 aa4.34□□□□□ -1.71
ATRX-205ENST00000479487 LETMD1Q6P1Q0 360 aa4.34□□□□□ -1.71
ATRX-205ENST00000479487 WFDC3Q8IUB2 231 aa4.34□□□□□ -1.71
ATRX-205ENST00000479487 ZNF654Q8IZM8 581 aa4.34□□□□□ -1.71
ATRX-205ENST00000479487 FBXO27Q8NI29 283 aa4.34□□□□□ -1.71
ATRX-205ENST00000479487 PPP1R13LQ8WUF5 828 aa4.34□□□□□ -1.71
ATRX-205ENST00000479487 KIRREL1Q96J84 757 aa4.34□□□□□ -1.71
ATRX-205ENST00000479487 TGIF2Q9GZN2 237 aa4.34□□□□□ -1.71
ATRX-205ENST00000479487 IGSF5Q9NSI5 407 aa4.34□□□□□ -1.71
ATRX-205ENST00000479487 GMIPQ9P107 970 aa4.34□□□□□ -1.71
ATRX-205ENST00000479487 ADAMTS6Q9UKP5 1117 aa4.34□□□□□ -1.71
ATRX-205ENST00000479487 PLAGL2Q9UPG8 496 aa4.34□□□□□ -1.71
ATRX-205ENST00000479487 CORINQ9Y5Q5 1042 aa4.34□□□□□ -1.71
ATRX-205ENST00000479487 CLSPNQ9HAW4 1339 aa4.34□□□□□ -1.71
ATRX-205ENST00000479487 GDNFP39905 211 aa4.33□□□□□ -1.72
ATRX-205ENST00000479487 CCNFP41002 786 aa4.33□□□□□ -1.72
ATRX-205ENST00000479487 ETV3P41162 512 aa4.33□□□□□ -1.72
ATRX-205ENST00000479487 ZNF165P49910 485 aa4.33□□□□□ -1.72
ATRX-205ENST00000479487 RAD51AP2Q09MP3 1159 aa4.33□□□□□ -1.72
ATRX-205ENST00000479487 APOBRQ0VD83 1088 aa4.33□□□□□ -1.72
ATRX-205ENST00000479487 MESP2Q0VG99 397 aa4.33□□□□□ -1.72
ATRX-205ENST00000479487 MLECQ14165 292 aa4.33□□□□□ -1.72
ATRX-205ENST00000479487 NT5DC4Q86YG4 428 aa4.33□□□□□ -1.72
ATRX-205ENST00000479487 SPACA3Q8IXA5 215 aa4.33□□□□□ -1.72
ATRX-205ENST00000479487 FBXO15Q8NCQ5 510 aaPredicted RBP4.33□□□□□ -1.72
ATRX-205ENST00000479487 PIWIL2Q8TC59 973 aaKnown RBP4.33□□□□□ -1.72
ATRX-205ENST00000479487 BRMS1Q9HCU9 246 aa4.33□□□□□ -1.72
ATRX-205ENST00000479487 UBP1Q9NZI7 540 aa4.33□□□□□ -1.72
ATRX-205ENST00000479487 CEP131Q9UPN4 1083 aa4.33□□□□□ -1.72
ATRX-205ENST00000479487 CTNND2Q9UQB3 1225 aa4.33□□□□□ -1.72
ATRX-205ENST00000479487 U3KQE9 123 aa4.33□□□□□ -1.72
ATRX-205ENST00000479487 SLC22A31A6NKX4 558 aa4.32□□□□□ -1.72
ATRX-205ENST00000479487 DNAJA2O60884 412 aa4.32□□□□□ -1.72
ATRX-205ENST00000479487 IMPDH2P12268 514 aa4.32□□□□□ -1.72
ATRX-205ENST00000479487 NKPD1Q17RQ9 610 aa4.32□□□□□ -1.72
ATRX-205ENST00000479487 LRRFIP1Q32MZ4 808 aaKnown RBP4.32□□□□□ -1.72
ATRX-205ENST00000479487 SFRP5Q5T4F7 317 aa4.32□□□□□ -1.72
ATRX-205ENST00000479487 SYDE1Q6ZW31 735 aaPredicted RBP4.32□□□□□ -1.72
ATRX-205ENST00000479487 TAB3Q8N5C8 712 aaPredicted RBP4.32□□□□□ -1.72
ATRX-205ENST00000479487 RBBP8NLQ8NC74 664 aaPredicted RBP4.32□□□□□ -1.72
ATRX-205ENST00000479487 FAM13CQ8NE31 585 aa4.32□□□□□ -1.72
ATRX-205ENST00000479487 NKD1Q969G9 470 aa4.32□□□□□ -1.72
ATRX-205ENST00000479487 SYTL4Q96C24 671 aaPredicted RBP4.32□□□□□ -1.72
ATRX-205ENST00000479487 MIPEPQ99797 713 aa4.32□□□□□ -1.72
ATRX-205ENST00000479487 CNNM2Q9H8M5 875 aa4.32□□□□□ -1.72
ATRX-205ENST00000479487 RAPGEFL1Q9UHV5 662 aa4.32□□□□□ -1.72
ATRX-205ENST00000479487 ZNRF3Q9ULT6 936 aa4.32□□□□□ -1.72
ATRX-205ENST00000479487 TPX2Q9ULW0 747 aaKnown RBP4.32□□□□□ -1.72
ATRX-205ENST00000479487 PCDHB14Q9Y5E9 798 aa4.32□□□□□ -1.72
ATRX-205ENST00000479487 PCDHGB7Q9Y5F8 929 aa4.32□□□□□ -1.72
ATRX-205ENST00000479487 TNFRSF10CO14798 259 aa4.31□□□□□ -1.72
ATRX-205ENST00000479487 RGS13O14921 159 aa4.31□□□□□ -1.72
ATRX-205ENST00000479487 TLR3O15455 904 aaKnown RBP4.31□□□□□ -1.72
ATRX-205ENST00000479487 GRIN3BO60391 1043 aa4.31□□□□□ -1.72
ATRX-205ENST00000479487 TCF3P15923 654 aa4.31□□□□□ -1.72
ATRX-205ENST00000479487 CD96P40200 585 aa4.31□□□□□ -1.72
ATRX-205ENST00000479487 SOX9P48436 509 aa4.31□□□□□ -1.72
ATRX-205ENST00000479487 KRTAP1-1Q07627 177 aa4.31□□□□□ -1.72
ATRX-205ENST00000479487 SEZ6Q53EL9 994 aa4.31□□□□□ -1.72
ATRX-205ENST00000479487 INTS3Q68E01 1043 aaKnown RBP4.31□□□□□ -1.72
ATRX-205ENST00000479487 THAP5Q7Z6K1 395 aa4.31□□□□□ -1.72
ATRX-205ENST00000479487 LRRC56Q8IYG6 542 aaPredicted RBP4.31□□□□□ -1.72
ATRX-205ENST00000479487 MFSD4AQ8N468 514 aa4.31□□□□□ -1.72
ATRX-205ENST00000479487 RIN3Q8TB24 985 aa4.31□□□□□ -1.72
ATRX-205ENST00000479487 RNF141Q8WVD5 230 aa4.31□□□□□ -1.72
ATRX-205ENST00000479487 VWCEQ96DN2 955 aa4.31□□□□□ -1.72
ATRX-205ENST00000479487 CCDC74BQ96LY2 380 aa4.31□□□□□ -1.72
ATRX-205ENST00000479487 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.31□□□□□ -1.72
ATRX-205ENST00000479487 CAPN6Q9Y6Q1 641 aa4.31□□□□□ -1.72
ATRX-205ENST00000479487 PITPNM2Q9BZ72 1349 aa4.3□□□□□ -1.72
ATRX-205ENST00000479487 CNTNAP4Q9C0A0 1308 aa4.3□□□□□ -1.72
ATRX-205ENST00000479487 ZNF503-AS2A6NEH8 195 aa4.3□□□□□ -1.72
ATRX-205ENST00000479487 UPK3BL1B0FP48 263 aa4.3□□□□□ -1.72
ATRX-205ENST00000479487 UPK3BL2E5RIL1 263 aa4.3□□□□□ -1.72
ATRX-205ENST00000479487 SRFP11831 508 aa4.3□□□□□ -1.72
ATRX-205ENST00000479487 CLCQ05315 142 aa4.3□□□□□ -1.72
ATRX-205ENST00000479487 PAK2Q13177 524 aa4.3□□□□□ -1.72
ATRX-205ENST00000479487 GPRASP2Q96D09 838 aa4.3□□□□□ -1.72
ATRX-205ENST00000479487 DPH2Q9BQC3 489 aaPredicted RBP4.3□□□□□ -1.72
ATRX-205ENST00000479487 ASPNQ9BXN1 380 aa4.3□□□□□ -1.72
ATRX-205ENST00000479487 ST14Q9Y5Y6 855 aa4.3□□□□□ -1.72
ATRX-205ENST00000479487 CHURC1-FNTBB4DL54 471 aa4.29□□□□□ -1.72
ATRX-205ENST00000479487 ZSCAN22P10073 491 aaPredicted RBP4.29□□□□□ -1.72
ATRX-205ENST00000479487 NME1P15531 152 aaKnown RBP4.29□□□□□ -1.72
ATRX-205ENST00000479487 CIAPIN1Q6FI81 312 aa4.29□□□□□ -1.72
ATRX-205ENST00000479487 OVOS1Q6IE37 1185 aa4.29□□□□□ -1.72
ATRX-205ENST00000479487 NLRC3Q7RTR2 1065 aa4.29□□□□□ -1.72
ATRX-205ENST00000479487 TMPRSS7Q7RTY8 843 aa4.29□□□□□ -1.72
ATRX-205ENST00000479487 AMIGO3Q86WK7 504 aa4.29□□□□□ -1.72
ATRX-205ENST00000479487 ATG4CQ96DT6 458 aa4.29□□□□□ -1.72
ATRX-205ENST00000479487 LIN37Q96GY3 246 aaPredicted RBP4.29□□□□□ -1.72
ATRX-205ENST00000479487 SEC16BQ96JE7 1060 aa4.29□□□□□ -1.72
ATRX-205ENST00000479487 Q96M66 194 aa4.29□□□□□ -1.72
ATRX-205ENST00000479487 SLC26A8Q96RN1 970 aa4.29□□□□□ -1.72
ATRX-205ENST00000479487 GPR62Q9BZJ7 368 aa4.29□□□□□ -1.72
ATRX-205ENST00000479487 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.29□□□□□ -1.72
ATRX-205ENST00000479487 DCP1AQ9NPI6 582 aaPredicted RBP4.29□□□□□ -1.72
ATRX-205ENST00000479487 SEMA3GQ9NS98 782 aa4.29□□□□□ -1.72
ATRX-205ENST00000479487 TCAF2A6NFQ2 919 aa4.28□□□□□ -1.72
ATRX-205ENST00000479487 PRR33A8MZF0 331 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms