RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 KRTAP17-1Q9BYP8 105 aa8.73□□□□□ -1.01
ITGA4-209ENST00000478440 METTL5Q9NRN9 209 aaKnown RBP8.73□□□□□ -1.01
ITGA4-209ENST00000478440 UGGT2Q9NYU1 1516 aa8.73□□□□□ -1.01
ITGA4-209ENST00000478440 KIF21BO75037 1637 aa8.72□□□□□ -1.01
ITGA4-209ENST00000478440 GOLGA3Q08378 1498 aa8.72□□□□□ -1.01
ITGA4-209ENST00000478440 BIN1O00499 593 aa8.72□□□□□ -1.01
ITGA4-209ENST00000478440 CD8BP10966 210 aa8.72□□□□□ -1.01
ITGA4-209ENST00000478440 FUT4P22083 530 aa8.72□□□□□ -1.01
ITGA4-209ENST00000478440 NKPD1Q17RQ9 610 aa8.72□□□□□ -1.01
ITGA4-209ENST00000478440 CBLL1Q75N03 491 aa8.72□□□□□ -1.01
ITGA4-209ENST00000478440 SLFN12Q8IYM2 578 aa8.72□□□□□ -1.01
ITGA4-209ENST00000478440 CYB5D2Q8WUJ1 264 aa8.72□□□□□ -1.01
ITGA4-209ENST00000478440 FMNL2Q96PY5 1086 aa8.72□□□□□ -1.01
ITGA4-209ENST00000478440 U3KQE9 123 aa8.72□□□□□ -1.01
ITGA4-209ENST00000478440 ZNF76P36508 570 aa8.71□□□□□ -1.02
ITGA4-209ENST00000478440 ZNF574Q6ZN55 896 aaPredicted RBP8.71□□□□□ -1.02
ITGA4-209ENST00000478440 THAP5Q7Z6K1 395 aa8.71□□□□□ -1.02
ITGA4-209ENST00000478440 PIWIL2Q8TC59 973 aaKnown RBP8.71□□□□□ -1.02
ITGA4-209ENST00000478440 PI4K2BQ8TCG2 481 aa8.71□□□□□ -1.02
ITGA4-209ENST00000478440 CEP131Q9UPN4 1083 aa8.71□□□□□ -1.02
ITGA4-209ENST00000478440 CD109Q6YHK3 1445 aa8.71□□□□□ -1.02
ITGA4-209ENST00000478440 GREM1O60565 184 aa8.7□□□□□ -1.02
ITGA4-209ENST00000478440 HTR3BO95264 441 aa8.7□□□□□ -1.02
ITGA4-209ENST00000478440 JUNBP17275 347 aaPredicted RBP8.7□□□□□ -1.02
ITGA4-209ENST00000478440 GARTP22102 1010 aa8.7□□□□□ -1.02
ITGA4-209ENST00000478440 VAMP1P23763 118 aa8.7□□□□□ -1.02
ITGA4-209ENST00000478440 CHMP4BP1P59074 171 aa8.7□□□□□ -1.02
ITGA4-209ENST00000478440 IKZF1Q13422 519 aa8.7□□□□□ -1.02
ITGA4-209ENST00000478440 FBXL19Q6PCT2 694 aa8.7□□□□□ -1.02
ITGA4-209ENST00000478440 ZNF296Q8WUU4 475 aaPredicted RBP8.7□□□□□ -1.02
ITGA4-209ENST00000478440 DPH2Q9BQC3 489 aaPredicted RBP8.7□□□□□ -1.02
ITGA4-209ENST00000478440 COPRSQ9NQ92 184 aa8.7□□□□□ -1.02
ITGA4-209ENST00000478440 LMCD1Q9NZU5 365 aa8.7□□□□□ -1.02
ITGA4-209ENST00000478440 REV1Q9UBZ9 1251 aa8.7□□□□□ -1.02
ITGA4-209ENST00000478440 CORINQ9Y5Q5 1042 aa8.7□□□□□ -1.02
ITGA4-209ENST00000478440 PITPNM2Q9BZ72 1349 aa8.7□□□□□ -1.02
ITGA4-209ENST00000478440 SLC23A3Q6PIS1 610 aa8.69□□□□□ -1.02
ITGA4-209ENST00000478440 CDH24Q86UP0 819 aa8.69□□□□□ -1.02
ITGA4-209ENST00000478440 KCNH3Q9ULD8 1083 aa8.69□□□□□ -1.02
ITGA4-209ENST00000478440 CAPN6Q9Y6Q1 641 aa8.69□□□□□ -1.02
ITGA4-209ENST00000478440 CBX7O95931 251 aa8.68□□□□□ -1.02
ITGA4-209ENST00000478440 ZNF792Q3KQV3 632 aa8.68□□□□□ -1.02
ITGA4-209ENST00000478440 WFDC3Q8IUB2 231 aa8.68□□□□□ -1.02
ITGA4-209ENST00000478440 RIN3Q8TB24 985 aa8.68□□□□□ -1.02
ITGA4-209ENST00000478440 ASIC4Q96FT7 647 aa8.68□□□□□ -1.02
ITGA4-209ENST00000478440 CCDC74BQ96LY2 380 aa8.68□□□□□ -1.02
ITGA4-209ENST00000478440 BACH2Q9BYV9 841 aa8.68□□□□□ -1.02
ITGA4-209ENST00000478440 TLR3O15455 904 aaKnown RBP8.67□□□□□ -1.02
ITGA4-209ENST00000478440 GRIN3BO60391 1043 aa8.67□□□□□ -1.02
ITGA4-209ENST00000478440 TNNI2P48788 182 aa8.67□□□□□ -1.02
ITGA4-209ENST00000478440 TRIM26Q12899 539 aaPredicted RBP8.67□□□□□ -1.02
ITGA4-209ENST00000478440 CDKAL1Q5VV42 579 aa8.67□□□□□ -1.02
ITGA4-209ENST00000478440 DNAJB8Q8NHS0 232 aa8.67□□□□□ -1.02
ITGA4-209ENST00000478440 CCDC120Q96HB5 630 aa8.67□□□□□ -1.02
ITGA4-209ENST00000478440 HSPA12BQ96MM6 686 aa8.67□□□□□ -1.02
ITGA4-209ENST00000478440 NT5C1AQ9BXI3 368 aa8.67□□□□□ -1.02
ITGA4-209ENST00000478440 KLHL3Q9UH77 587 aa8.67□□□□□ -1.02
ITGA4-209ENST00000478440 POLR3KQ9Y2Y1 108 aaPredicted RBP8.67□□□□□ -1.02
ITGA4-209ENST00000478440 ATE1O95260 518 aa8.66□□□□□ -1.02
ITGA4-209ENST00000478440 ZP2Q05996 745 aa8.66□□□□□ -1.02
ITGA4-209ENST00000478440 APOBRQ0VD83 1088 aa8.66□□□□□ -1.02
ITGA4-209ENST00000478440 REXO1Q8N1G1 1221 aaKnown RBP8.66□□□□□ -1.02
ITGA4-209ENST00000478440 RNF34Q969K3 372 aa8.66□□□□□ -1.02
ITGA4-209ENST00000478440 TRIT1Q9H3H1 467 aaKnown RBP8.66□□□□□ -1.02
ITGA4-209ENST00000478440 RC3H2Q9HBD1 1191 aaKnown RBP8.66□□□□□ -1.02
ITGA4-209ENST00000478440 ST14Q9Y5Y6 855 aa8.66□□□□□ -1.02
ITGA4-209ENST00000478440 ABCA8O94911 1581 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 MAGI3Q5TCQ9 1506 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 ARID4BQ4LE39 1312 aaPredicted RBP8.65□□□□□ -1.02
ITGA4-209ENST00000478440 PRR33A8MZF0 331 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 UPK3BL1B0FP48 263 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 UPK3BL2E5RIL1 263 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 ZNF165P49910 485 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 LRRFIP1Q32MZ4 808 aaKnown RBP8.65□□□□□ -1.02
ITGA4-209ENST00000478440 TMPRSS7Q7RTY8 843 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 ATG4DQ86TL0 474 aaPredicted RBP8.65□□□□□ -1.02
ITGA4-209ENST00000478440 KIAA0825Q8IV33 1275 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 PHACTR4Q8IZ21 702 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 FBXO27Q8NI29 283 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 RNF141Q8WVD5 230 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 SPON2Q9BUD6 331 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 KRTAP4-11Q9BYQ6 195 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 BRMS1Q9HCU9 246 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 SEMA3GQ9NS98 782 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 GMIPQ9P107 970 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 ADAMTS1Q9UHI8 967 aa8.65□□□□□ -1.02
ITGA4-209ENST00000478440 SCAMP3O14828 347 aaKnown RBP8.64□□□□□ -1.03
ITGA4-209ENST00000478440 ITGB5P18084 799 aa8.64□□□□□ -1.03
ITGA4-209ENST00000478440 CD96P40200 585 aa8.64□□□□□ -1.03
ITGA4-209ENST00000478440 USP48Q86UV5 1035 aa8.64□□□□□ -1.03
ITGA4-209ENST00000478440 ASPNQ9BXN1 380 aa8.64□□□□□ -1.03
ITGA4-209ENST00000478440 EHMT1Q9H9B1 1298 aa8.64□□□□□ -1.03
ITGA4-209ENST00000478440 PCDHB14Q9Y5E9 798 aa8.64□□□□□ -1.03
ITGA4-209ENST00000478440 H3BS24 57 aa8.63□□□□□ -1.03
ITGA4-209ENST00000478440 RNASE1P07998 156 aaKnown RBP8.63□□□□□ -1.03
ITGA4-209ENST00000478440 GBP1P32455 592 aa8.63□□□□□ -1.03
ITGA4-209ENST00000478440 FANCCQ00597 558 aa8.63□□□□□ -1.03
ITGA4-209ENST00000478440 TNK2Q07912 1038 aa8.63□□□□□ -1.03
ITGA4-209ENST00000478440 SEZ6Q53EL9 994 aa8.63□□□□□ -1.03
ITGA4-209ENST00000478440 LDLRAD1Q5T700 205 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms