RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 GABPAQ06546 454 aa11.72□□□□□ -0.53
CCM2-210ENST00000478169 SEPT2Q15019 361 aa11.72□□□□□ -0.53
CCM2-210ENST00000478169 TTF1Q15361 905 aaPredicted RBP11.72□□□□□ -0.53
CCM2-210ENST00000478169 FTSJ3Q8IY81 847 aaKnown RBP11.72□□□□□ -0.53
CCM2-210ENST00000478169 MB21D1Q8N884 522 aa11.72□□□□□ -0.53
CCM2-210ENST00000478169 SHCBP1Q8NEM2 672 aa11.72□□□□□ -0.53
CCM2-210ENST00000478169 TRPV1Q8NER1 839 aa11.72□□□□□ -0.53
CCM2-210ENST00000478169 SLC5A4Q9NY91 659 aa11.72□□□□□ -0.53
CCM2-210ENST00000478169 A0A0G2JMZ2 1700 aa11.72□□□□□ -0.53
CCM2-210ENST00000478169 MAGEB6P1A0A0J9YX57 407 aa11.71□□□□□ -0.53
CCM2-210ENST00000478169 ADORA2AP29274 412 aa11.71□□□□□ -0.53
CCM2-210ENST00000478169 RTP1P59025 263 aa11.71□□□□□ -0.53
CCM2-210ENST00000478169 AACSQ86V21 672 aa11.71□□□□□ -0.53
CCM2-210ENST00000478169 ITPRIPQ8IWB1 547 aa11.71□□□□□ -0.53
CCM2-210ENST00000478169 MOV10L1Q9BXT6 1211 aaKnown RBP11.71□□□□□ -0.53
CCM2-210ENST00000478169 CRNKL1Q9BZJ0 848 aaKnown RBP11.71□□□□□ -0.53
CCM2-210ENST00000478169 SPATC1LQ9H0A9 340 aa11.71□□□□□ -0.53
CCM2-210ENST00000478169 BAZ2AQ9UIF9 1905 aaKnown RBP11.7□□□□□ -0.54
CCM2-210ENST00000478169 PLXNA1Q9UIW2 1896 aa11.7□□□□□ -0.54
CCM2-210ENST00000478169 COL11A1P12107 1806 aaPredicted RBP11.7□□□□□ -0.54
CCM2-210ENST00000478169 A0A1W2PRG0 241 aa11.7□□□□□ -0.54
CCM2-210ENST00000478169 KBTBD13C9JR72 458 aa11.7□□□□□ -0.54
CCM2-210ENST00000478169 SEPT4O43236 478 aa11.7□□□□□ -0.54
CCM2-210ENST00000478169 ERCC3P19447 782 aa11.7□□□□□ -0.54
CCM2-210ENST00000478169 HSP90AB4PQ58FF6 505 aa11.7□□□□□ -0.54
CCM2-210ENST00000478169 GJC2Q5T442 439 aaPredicted RBP11.7□□□□□ -0.54
CCM2-210ENST00000478169 SLC9C2Q5TAH2 1124 aa11.7□□□□□ -0.54
CCM2-210ENST00000478169 CEP85Q6P2H3 762 aa11.7□□□□□ -0.54
CCM2-210ENST00000478169 SLC39A5Q6ZMH5 540 aa11.7□□□□□ -0.54
CCM2-210ENST00000478169 TMEM179Q6ZVK1 233 aa11.7□□□□□ -0.54
CCM2-210ENST00000478169 ABRAQ8N0Z2 381 aa11.7□□□□□ -0.54
CCM2-210ENST00000478169 GUCD1Q96NT3 240 aa11.7□□□□□ -0.54
CCM2-210ENST00000478169 TANGO6Q9C0B7 1094 aa11.7□□□□□ -0.54
CCM2-210ENST00000478169 MROH8Q9H579 483 aa11.7□□□□□ -0.54
CCM2-210ENST00000478169 MCM9Q9NXL9 1143 aa11.7□□□□□ -0.54
CCM2-210ENST00000478169 MPHOSPH10O00566 681 aaKnown RBP11.69□□□□□ -0.54
CCM2-210ENST00000478169 COBLO75128 1261 aa11.69□□□□□ -0.54
CCM2-210ENST00000478169 PDE6AP16499 860 aa11.69□□□□□ -0.54
CCM2-210ENST00000478169 DSG3P32926 999 aa11.69□□□□□ -0.54
CCM2-210ENST00000478169 SNX17Q15036 470 aa11.69□□□□□ -0.54
CCM2-210ENST00000478169 ZNF697Q5TEC3 545 aa11.69□□□□□ -0.54
CCM2-210ENST00000478169 C1orf53Q5VUE5 145 aa11.69□□□□□ -0.54
CCM2-210ENST00000478169 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCM2-210ENST00000478169 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCM2-210ENST00000478169 RNF39Q9H2S5 420 aa11.69□□□□□ -0.54
CCM2-210ENST00000478169 DCP1AQ9NPI6 582 aaPredicted RBP11.69□□□□□ -0.54
CCM2-210ENST00000478169 SWAP70Q9UH65 585 aa11.69□□□□□ -0.54
CCM2-210ENST00000478169 EXOC6BQ9Y2D4 811 aa11.69□□□□□ -0.54
CCM2-210ENST00000478169 ATP11BQ9Y2G3 1177 aa11.69□□□□□ -0.54
CCM2-210ENST00000478169 UNC80Q8N2C7 3258 aa11.69□□□□□ -0.54
CCM2-210ENST00000478169 MYH7P12883 1935 aa11.68□□□□□ -0.54
CCM2-210ENST00000478169 RLBP1P12271 317 aa11.68□□□□□ -0.54
CCM2-210ENST00000478169 COL25A1Q9BXS0 654 aaPredicted RBP11.68□□□□□ -0.54
CCM2-210ENST00000478169 SH2D4AQ9H788 454 aa11.68□□□□□ -0.54
CCM2-210ENST00000478169 ARHGEF10LQ9HCE6 1279 aa11.68□□□□□ -0.54
CCM2-210ENST00000478169 NRBP1Q9UHY1 535 aa11.68□□□□□ -0.54
CCM2-210ENST00000478169 ZNF532Q9HCE3 1301 aa11.67□□□□□ -0.54
CCM2-210ENST00000478169 TCRBV5S4A2TA0A5A2 114 aa11.67□□□□□ -0.54
CCM2-210ENST00000478169 FLOT1O75955 427 aa11.67□□□□□ -0.54
CCM2-210ENST00000478169 SLC25A27O95847 323 aa11.67□□□□□ -0.54
CCM2-210ENST00000478169 FCER1AP12319 257 aa11.67□□□□□ -0.54
CCM2-210ENST00000478169 PLS1Q14651 629 aa11.67□□□□□ -0.54
CCM2-210ENST00000478169 LRRC41Q15345 812 aa11.67□□□□□ -0.54
CCM2-210ENST00000478169 SHHQ15465 462 aa11.67□□□□□ -0.54
CCM2-210ENST00000478169 NCAPG2Q86XI2 1143 aa11.67□□□□□ -0.54
CCM2-210ENST00000478169 CLASRPQ8N2M8 674 aaKnown RBP11.67□□□□□ -0.54
CCM2-210ENST00000478169 RHPN1Q8TCX5 695 aa11.67□□□□□ -0.54
CCM2-210ENST00000478169 CCDC17Q96LX7 622 aa11.67□□□□□ -0.54
CCM2-210ENST00000478169 FAM161BQ96MY7 647 aa11.67□□□□□ -0.54
CCM2-210ENST00000478169 TMX2Q9Y320 296 aa11.67□□□□□ -0.54
CCM2-210ENST00000478169 WDR46O15213 610 aaKnown RBP11.66□□□□□ -0.54
CCM2-210ENST00000478169 ADCYAP1R1P41586 468 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 SMAD3P84022 425 aaKnown RBP11.66□□□□□ -0.54
CCM2-210ENST00000478169 EVX2Q03828 476 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 ICA1Q05084 483 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 TRIM60Q495X7 471 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 KIAA1755Q5JYT7 1200 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 ANO1Q5XXA6 986 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 SIAH1Q8IUQ4 282 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 LCORLQ8N3X6 602 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 SDR42E1Q8WUS8 393 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 BADQ92934 168 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 ATG4CQ96DT6 458 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 MAML3Q96JK9 1138 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 CDX2Q99626 313 aaPredicted RBP11.66□□□□□ -0.54
CCM2-210ENST00000478169 VCPKMTQ9H867 229 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 IL1RAPL2Q9NP60 686 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 PRDM5Q9NQX1 630 aaPredicted RBP11.66□□□□□ -0.54
CCM2-210ENST00000478169 PDLIM7Q9NR12 457 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 ATP8A2Q9NTI2 1148 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 ADAMTS5Q9UNA0 930 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 MYO9BQ13459 2157 aa11.66□□□□□ -0.54
CCM2-210ENST00000478169 GOLIM4O00461 696 aa11.65□□□□□ -0.54
CCM2-210ENST00000478169 MYCNP04198 464 aaPredicted RBP11.65□□□□□ -0.54
CCM2-210ENST00000478169 CYP2D6P10635 497 aa11.65□□□□□ -0.54
CCM2-210ENST00000478169 RARBP10826 455 aa11.65□□□□□ -0.54
CCM2-210ENST00000478169 AKR1B1P15121 316 aa11.65□□□□□ -0.54
CCM2-210ENST00000478169 FAM47AQ5JRC9 791 aa11.65□□□□□ -0.54
CCM2-210ENST00000478169 PRAMEF19Q5SWL8 479 aa11.65□□□□□ -0.54
CCM2-210ENST00000478169 C9orf50Q5SZB4 431 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms