RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 Q3C1V9 767 aa27.08■■□□□ 1.93
CNIH4-208ENST00000477413 UBE2Q1Q7Z7E8 422 aa27.08■■□□□ 1.93
CNIH4-208ENST00000477413 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.08■■□□□ 1.93
CNIH4-208ENST00000477413 PORCNQ9H237 461 aa27.08■■□□□ 1.93
CNIH4-208ENST00000477413 PATL2C9JE40 543 aaKnown RBP27.07■■□□□ 1.92
CNIH4-208ENST00000477413 PEX10O60683 326 aa27.07■■□□□ 1.92
CNIH4-208ENST00000477413 RASA1P20936 1047 aa27.07■■□□□ 1.92
CNIH4-208ENST00000477413 KIAA1755Q5JYT7 1200 aa27.07■■□□□ 1.92
CNIH4-208ENST00000477413 CLEC10AQ8IUN9 316 aa27.07■■□□□ 1.92
CNIH4-208ENST00000477413 EVI5LQ96CN4 794 aa27.07■■□□□ 1.92
CNIH4-208ENST00000477413 RNF208Q9H0X6 261 aa27.07■■□□□ 1.92
CNIH4-208ENST00000477413 RWDD1Q9H446 243 aaPredicted RBP27.07■■□□□ 1.92
CNIH4-208ENST00000477413 BIN2Q9UBW5 565 aaPredicted RBP27.07■■□□□ 1.92
CNIH4-208ENST00000477413 PLIN4Q96Q06 1357 aa27.07■■□□□ 1.92
CNIH4-208ENST00000477413 MYCP01106 439 aaPredicted RBP27.06■■□□□ 1.92
CNIH4-208ENST00000477413 CCNA1P78396 465 aa27.06■■□□□ 1.92
CNIH4-208ENST00000477413 MORN1Q5T089 497 aa27.06■■□□□ 1.92
CNIH4-208ENST00000477413 GPR142Q7Z601 462 aa27.06■■□□□ 1.92
CNIH4-208ENST00000477413 NUDT12Q9BQG2 462 aa27.06■■□□□ 1.92
CNIH4-208ENST00000477413 PAGR1Q9BTK6 254 aa27.06■■□□□ 1.92
CNIH4-208ENST00000477413 UNC93B1Q9H1C4 597 aa27.06■■□□□ 1.92
CNIH4-208ENST00000477413 WDR46O15213 610 aaKnown RBP27.05■■□□□ 1.92
CNIH4-208ENST00000477413 COG2Q14746 738 aa27.05■■□□□ 1.92
CNIH4-208ENST00000477413 IFNL3Q8IZI9 196 aa27.05■■□□□ 1.92
CNIH4-208ENST00000477413 SEC62Q99442 399 aaKnown RBP27.05■■□□□ 1.92
CNIH4-208ENST00000477413 BTBD7Q9P203 1132 aa27.05■■□□□ 1.92
CNIH4-208ENST00000477413 FOXP2O15409 715 aa27.04■■□□□ 1.92
CNIH4-208ENST00000477413 TDO2P48775 406 aa27.04■■□□□ 1.92
CNIH4-208ENST00000477413 MAP3K21Q5TCX8 1036 aa27.04■■□□□ 1.92
CNIH4-208ENST00000477413 PLEKHH3Q7Z736 793 aa27.04■■□□□ 1.92
CNIH4-208ENST00000477413 TRMT44Q8IYL2 757 aaKnown RBP27.04■■□□□ 1.92
CNIH4-208ENST00000477413 MB21D1Q8N884 522 aa27.04■■□□□ 1.92
CNIH4-208ENST00000477413 EXOC6Q8TAG9 804 aa27.04■■□□□ 1.92
CNIH4-208ENST00000477413 U2AF1L4Q8WU68 220 aaKnown RBP27.04■■□□□ 1.92
CNIH4-208ENST00000477413 NACAP1Q9BZK3 213 aa27.04■■□□□ 1.92
CNIH4-208ENST00000477413 ZNF287Q9HBT7 754 aa27.04■■□□□ 1.92
CNIH4-208ENST00000477413 HOXC10Q9NYD6 342 aa27.04■■□□□ 1.92
CNIH4-208ENST00000477413 MYH4Q9Y623 1939 aa27.04■■□□□ 1.92
CNIH4-208ENST00000477413 IGKV6D-41A0A0C4DH26 115 aa27.03■■□□□ 1.92
CNIH4-208ENST00000477413 EEF2P13639 858 aaKnown RBP27.03■■□□□ 1.92
CNIH4-208ENST00000477413 TRIB2Q92519 343 aa27.03■■□□□ 1.92
CNIH4-208ENST00000477413 SYNPO2Q9UMS6 1093 aa27.03■■□□□ 1.92
CNIH4-208ENST00000477413 APBA2Q99767 749 aa27.02■■□□□ 1.92
CNIH4-208ENST00000477413 TANGO6Q9C0B7 1094 aa27.02■■□□□ 1.92
CNIH4-208ENST00000477413 CRISPLD2Q9H0B8 497 aa27.02■■□□□ 1.92
CNIH4-208ENST00000477413 OSBPL3Q9H4L5 887 aa27.02■■□□□ 1.92
CNIH4-208ENST00000477413 NYAP2Q9P242 653 aa27.02■■□□□ 1.92
CNIH4-208ENST00000477413 CEP290O15078 2479 aa27.01■■□□□ 1.92
CNIH4-208ENST00000477413 SGPL1O95470 568 aa27.01■■□□□ 1.91
CNIH4-208ENST00000477413 NUCB1Q02818 461 aa27.01■■□□□ 1.91
CNIH4-208ENST00000477413 LNPKQ9C0E8 428 aa27.01■■□□□ 1.91
CNIH4-208ENST00000477413 ADAMTS5Q9UNA0 930 aa27.01■■□□□ 1.91
CNIH4-208ENST00000477413 COL11A1P12107 1806 aaPredicted RBP27.01■■□□□ 1.91
CNIH4-208ENST00000477413 MINDY4BA8MYZ0 360 aa27■■□□□ 1.91
CNIH4-208ENST00000477413 IGHDP01880 384 aa27■■□□□ 1.91
CNIH4-208ENST00000477413 HOXC6P09630 235 aa27■■□□□ 1.91
CNIH4-208ENST00000477413 DSG3P32926 999 aa27■■□□□ 1.91
CNIH4-208ENST00000477413 RGS2P41220 211 aa27■■□□□ 1.91
CNIH4-208ENST00000477413 GRB14Q14449 540 aa27■■□□□ 1.91
CNIH4-208ENST00000477413 CHD1LQ86WJ1 897 aa27■■□□□ 1.91
CNIH4-208ENST00000477413 SHCBP1Q8NEM2 672 aa27■■□□□ 1.91
CNIH4-208ENST00000477413 MKNK2Q9HBH9 465 aa27■■□□□ 1.91
CNIH4-208ENST00000477413 GOPCQ9HD26 462 aa27■■□□□ 1.91
CNIH4-208ENST00000477413 HELLSQ9NRZ9 838 aa27■■□□□ 1.91
CNIH4-208ENST00000477413 RPTORQ8N122 1335 aa26.99■■□□□ 1.91
CNIH4-208ENST00000477413 SLC15A5A6NIM6 579 aa26.99■■□□□ 1.91
CNIH4-208ENST00000477413 APPP05067 770 aa26.99■■□□□ 1.91
CNIH4-208ENST00000477413 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.99■■□□□ 1.91
CNIH4-208ENST00000477413 NAPBQ9H115 298 aa26.99■■□□□ 1.91
CNIH4-208ENST00000477413 ZMYM6O95789 1325 aa26.98■■□□□ 1.91
CNIH4-208ENST00000477413 PTPREP23469 700 aa26.98■■□□□ 1.91
CNIH4-208ENST00000477413 MAP2K5Q13163 448 aa26.98■■□□□ 1.91
CNIH4-208ENST00000477413 CCAR1Q8IX12 1150 aaKnown RBP26.98■■□□□ 1.91
CNIH4-208ENST00000477413 SPICE1Q8N0Z3 855 aa26.98■■□□□ 1.91
CNIH4-208ENST00000477413 SPATC1LQ9H0A9 340 aa26.98■■□□□ 1.91
CNIH4-208ENST00000477413 FLOT1O75955 427 aa26.97■■□□□ 1.91
CNIH4-208ENST00000477413 IGHA2P01877 340 aa26.97■■□□□ 1.91
CNIH4-208ENST00000477413 CYP2B6P20813 491 aa26.97■■□□□ 1.91
CNIH4-208ENST00000477413 PPARAQ07869 468 aa26.97■■□□□ 1.91
CNIH4-208ENST00000477413 MOV10L1Q9BXT6 1211 aaKnown RBP26.97■■□□□ 1.91
CNIH4-208ENST00000477413 FRMPD3Q5JV73 1810 aa26.96■■□□□ 1.91
CNIH4-208ENST00000477413 ZKSCAN1P17029 563 aaPredicted RBP26.96■■□□□ 1.91
CNIH4-208ENST00000477413 PDE4BQ07343 736 aa26.96■■□□□ 1.91
CNIH4-208ENST00000477413 ALX1Q15699 326 aa26.96■■□□□ 1.91
CNIH4-208ENST00000477413 PLEKHM2Q8IWE5 1019 aa26.96■■□□□ 1.91
CNIH4-208ENST00000477413 MKL1Q969V6 931 aa26.96■■□□□ 1.91
CNIH4-208ENST00000477413 DEFB118Q96PH6 123 aa26.96■■□□□ 1.91
CNIH4-208ENST00000477413 HMX1Q9NP08 348 aaPredicted RBP26.96■■□□□ 1.91
CNIH4-208ENST00000477413 ANAPC4Q9UJX5 808 aa26.96■■□□□ 1.91
CNIH4-208ENST00000477413 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.96■■□□□ 1.91
CNIH4-208ENST00000477413 TRIM32Q13049 653 aa26.95■■□□□ 1.9
CNIH4-208ENST00000477413 ATG4CQ96DT6 458 aa26.95■■□□□ 1.9
CNIH4-208ENST00000477413 MTMR4Q9NYA4 1195 aa26.95■■□□□ 1.9
CNIH4-208ENST00000477413 SUPT16HQ9Y5B9 1047 aaKnown RBP26.95■■□□□ 1.9
CNIH4-208ENST00000477413 STRNO43815 780 aa26.94■■□□□ 1.9
CNIH4-208ENST00000477413 FARP2O94887 1054 aaPredicted RBP26.94■■□□□ 1.9
CNIH4-208ENST00000477413 SLC3A2P08195 630 aaKnown RBP26.94■■□□□ 1.9
CNIH4-208ENST00000477413 CCDC129Q6ZRS4 1044 aa26.94■■□□□ 1.9
CNIH4-208ENST00000477413 ZNF444Q8N0Y2 327 aaPredicted RBP26.94■■□□□ 1.9
CNIH4-208ENST00000477413 ABRAQ8N0Z2 381 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms