RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 NOVP48745 357 aa21.05■□□□□ 0.96
ATG4B-217ENST00000475693 SLC35G1Q2M3R5 365 aa21.05■□□□□ 0.96
ATG4B-217ENST00000475693 ZKSCAN4Q969J2 545 aaPredicted RBP21.05■□□□□ 0.96
ATG4B-217ENST00000475693 DCPSQ96C86 337 aaKnown RBP21.05■□□□□ 0.96
ATG4B-217ENST00000475693 TBC1D12O60347 775 aa21.05■□□□□ 0.96
ATG4B-217ENST00000475693 VEGFAP15692 232 aaPredicted RBP21.05■□□□□ 0.96
ATG4B-217ENST00000475693 MAP3K10Q02779 954 aa21.05■□□□□ 0.96
ATG4B-217ENST00000475693 ICA1Q05084 483 aa21.05■□□□□ 0.96
ATG4B-217ENST00000475693 KRT26Q7Z3Y9 468 aa21.05■□□□□ 0.96
ATG4B-217ENST00000475693 FAM184AQ8NB25 1140 aa21.05■□□□□ 0.96
ATG4B-217ENST00000475693 TNPO1Q92973 898 aaKnown RBP21.05■□□□□ 0.96
ATG4B-217ENST00000475693 LLPHQ9BRT6 129 aaKnown RBP21.05■□□□□ 0.96
ATG4B-217ENST00000475693 MAD2L2Q9UI95 211 aa21.05■□□□□ 0.96
ATG4B-217ENST00000475693 CAP2P40123 477 aa21.04■□□□□ 0.96
ATG4B-217ENST00000475693 TMEM179Q6ZVK1 233 aa21.04■□□□□ 0.96
ATG4B-217ENST00000475693 CDC37L1Q7L3B6 337 aa21.04■□□□□ 0.96
ATG4B-217ENST00000475693 FERMT3Q86UX7 667 aa21.04■□□□□ 0.96
ATG4B-217ENST00000475693 ZBTB21Q9ULJ3 1066 aa21.04■□□□□ 0.96
ATG4B-217ENST00000475693 STX6O43752 255 aa21.04■□□□□ 0.96
ATG4B-217ENST00000475693 DHX16O60231 1041 aaKnown RBP21.04■□□□□ 0.96
ATG4B-217ENST00000475693 DDAH1O94760 285 aa21.04■□□□□ 0.96
ATG4B-217ENST00000475693 ZYXQ15942 572 aaKnown RBP21.04■□□□□ 0.96
ATG4B-217ENST00000475693 CTCFLQ8NI51 663 aaPredicted RBP21.04■□□□□ 0.96
ATG4B-217ENST00000475693 KANSL2Q9H9L4 492 aa21.04■□□□□ 0.96
ATG4B-217ENST00000475693 CABP5Q9NP86 173 aa21.04■□□□□ 0.96
ATG4B-217ENST00000475693 FUT2Q10981 343 aa21.03■□□□□ 0.96
ATG4B-217ENST00000475693 DGKZQ13574 1117 aa21.03■□□□□ 0.96
ATG4B-217ENST00000475693 USP50Q70EL3 339 aaPredicted RBP21.03■□□□□ 0.96
ATG4B-217ENST00000475693 SULF1Q8IWU6 871 aa21.03■□□□□ 0.96
ATG4B-217ENST00000475693 UBA5Q9GZZ9 404 aa21.03■□□□□ 0.96
ATG4B-217ENST00000475693 CLEC11AQ9Y240 323 aa21.03■□□□□ 0.96
ATG4B-217ENST00000475693 SSC5DA1L4H1 1573 aa21.03■□□□□ 0.96
ATG4B-217ENST00000475693 CCDC178Q5BJE1 867 aa21.02■□□□□ 0.96
ATG4B-217ENST00000475693 KIAA1755Q5JYT7 1200 aa21.02■□□□□ 0.96
ATG4B-217ENST00000475693 SPICE1Q8N0Z3 855 aa21.02■□□□□ 0.96
ATG4B-217ENST00000475693 NUP88Q99567 741 aaPredicted RBP21.02■□□□□ 0.96
ATG4B-217ENST00000475693 CIZ1Q9ULV3 898 aaPredicted RBP21.02■□□□□ 0.96
ATG4B-217ENST00000475693 MTMR6Q9Y217 621 aa21.02■□□□□ 0.96
ATG4B-217ENST00000475693 V9GY48 417 aaPredicted RBP21.02■□□□□ 0.96
ATG4B-217ENST00000475693 ZC3H4Q9UPT8 1303 aaKnown RBP21.02■□□□□ 0.96
ATG4B-217ENST00000475693 GREB1LQ9C091 1923 aaPredicted RBP21.02■□□□□ 0.96
ATG4B-217ENST00000475693 BRD1O95696 1058 aa21.02■□□□□ 0.96
ATG4B-217ENST00000475693 MAP1SQ66K74 1059 aaPredicted RBP21.02■□□□□ 0.96
ATG4B-217ENST00000475693 TTBK2Q6IQ55 1244 aa21.02■□□□□ 0.96
ATG4B-217ENST00000475693 TMTC3Q6ZXV5 915 aa21.02■□□□□ 0.96
ATG4B-217ENST00000475693 MOB2Q70IA6 237 aa21.02■□□□□ 0.96
ATG4B-217ENST00000475693 KCTD1Q719H9 257 aa21.02■□□□□ 0.96
ATG4B-217ENST00000475693 GPCPD1Q9NPB8 672 aa21.02■□□□□ 0.96
ATG4B-217ENST00000475693 NMRK2Q9NPI5 230 aa21.02■□□□□ 0.96
ATG4B-217ENST00000475693 PDHBP11177 359 aa21.01■□□□□ 0.95
ATG4B-217ENST00000475693 IFNAR1P17181 557 aa21.01■□□□□ 0.95
ATG4B-217ENST00000475693 GRM4Q14833 912 aa21.01■□□□□ 0.95
ATG4B-217ENST00000475693 FAM173BQ6P4H8 233 aa21.01■□□□□ 0.95
ATG4B-217ENST00000475693 VAT1LQ9HCJ6 419 aa21.01■□□□□ 0.95
ATG4B-217ENST00000475693 ISY1Q9ULR0 285 aaKnown RBP21.01■□□□□ 0.95
ATG4B-217ENST00000475693 CYTH3O43739 400 aa21.01■□□□□ 0.95
ATG4B-217ENST00000475693 SSRP1Q08945 709 aaKnown RBP21.01■□□□□ 0.95
ATG4B-217ENST00000475693 WRNIP1Q96S55 665 aa21.01■□□□□ 0.95
ATG4B-217ENST00000475693 NID2Q14112 1375 aa21■□□□□ 0.95
ATG4B-217ENST00000475693 CALM1P0DP23 149 aa21■□□□□ 0.95
ATG4B-217ENST00000475693 CALM2P0DP24 149 aa21■□□□□ 0.95
ATG4B-217ENST00000475693 CALM3P0DP25 149 aa21■□□□□ 0.95
ATG4B-217ENST00000475693 SHISA4Q96DD7 197 aa21■□□□□ 0.95
ATG4B-217ENST00000475693 MYH4Q9Y623 1939 aa21■□□□□ 0.95
ATG4B-217ENST00000475693 TRAF5O00463 557 aa21■□□□□ 0.95
ATG4B-217ENST00000475693 FMNL1O95466 1100 aaPredicted RBP21■□□□□ 0.95
ATG4B-217ENST00000475693 SLC16A2P36021 539 aa21■□□□□ 0.95
ATG4B-217ENST00000475693 NT5C2P49902 561 aa21■□□□□ 0.95
ATG4B-217ENST00000475693 HMGN5P82970 282 aaKnown RBP21■□□□□ 0.95
ATG4B-217ENST00000475693 NYAP2Q9P242 653 aa21■□□□□ 0.95
ATG4B-217ENST00000475693 IQCA1LA6NCM1 817 aa20.99■□□□□ 0.95
ATG4B-217ENST00000475693 PALM3A6NDB9 673 aaPredicted RBP20.99■□□□□ 0.95
ATG4B-217ENST00000475693 KLRF2D3W0D1 207 aa20.99■□□□□ 0.95
ATG4B-217ENST00000475693 MCM4P33991 863 aa20.99■□□□□ 0.95
ATG4B-217ENST00000475693 NUCB2P80303 420 aa20.99■□□□□ 0.95
ATG4B-217ENST00000475693 ALG1Q9BT22 464 aa20.99■□□□□ 0.95
ATG4B-217ENST00000475693 PITPNM2Q9BZ72 1349 aa20.99■□□□□ 0.95
ATG4B-217ENST00000475693 CCDC196A0A1B0GTZ2 297 aa20.98■□□□□ 0.95
ATG4B-217ENST00000475693 PARP1P09874 1014 aaKnown RBP20.98■□□□□ 0.95
ATG4B-217ENST00000475693 PKN1Q16512 942 aa20.98■□□□□ 0.95
ATG4B-217ENST00000475693 CPLX2Q6PUV4 134 aaKnown RBP20.98■□□□□ 0.95
ATG4B-217ENST00000475693 CNTNAP5Q8WYK1 1306 aa20.98■□□□□ 0.95
ATG4B-217ENST00000475693 F5H6K3 240 aa20.98■□□□□ 0.95
ATG4B-217ENST00000475693 USP2O75604 605 aaPredicted RBP20.98■□□□□ 0.95
ATG4B-217ENST00000475693 ZSCAN22P10073 491 aaPredicted RBP20.98■□□□□ 0.95
ATG4B-217ENST00000475693 RCAN1P53805 252 aa20.98■□□□□ 0.95
ATG4B-217ENST00000475693 KLRC3Q07444 240 aa20.98■□□□□ 0.95
ATG4B-217ENST00000475693 MKL1Q969V6 931 aa20.98■□□□□ 0.95
ATG4B-217ENST00000475693 RBM28Q9NW13 759 aaKnown RBP20.98■□□□□ 0.95
ATG4B-217ENST00000475693 H3BQV1 296 aa20.97■□□□□ 0.95
ATG4B-217ENST00000475693 CDKL5O76039 1030 aa20.97■□□□□ 0.95
ATG4B-217ENST00000475693 IFFO2Q5TF58 517 aa20.97■□□□□ 0.95
ATG4B-217ENST00000475693 SLFN13Q68D06 897 aa20.97■□□□□ 0.95
ATG4B-217ENST00000475693 KLRG1Q96E93 195 aa20.97■□□□□ 0.95
ATG4B-217ENST00000475693 CDCA5Q96FF9 252 aa20.97■□□□□ 0.95
ATG4B-217ENST00000475693 ZNF341Q9BYN7 854 aa20.97■□□□□ 0.95
ATG4B-217ENST00000475693 KCNJ14Q9UNX9 436 aa20.97■□□□□ 0.95
ATG4B-217ENST00000475693 FSD2A1L4K1 749 aa20.97■□□□□ 0.95
ATG4B-217ENST00000475693 CCDC96Q2M329 555 aa20.97■□□□□ 0.95
ATG4B-217ENST00000475693 NDUFB10O96000 172 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms