RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 ATP8A2Q9NTI2 1148 aa8.48□□□□□ -1.05
HDAC3-207ENST00000475549 STAP2Q9UGK3 403 aa8.48□□□□□ -1.05
HDAC3-207ENST00000475549 PCDHB15Q9Y5E8 787 aa8.48□□□□□ -1.05
HDAC3-207ENST00000475549 MAST2Q6P0Q8 1798 aa8.48□□□□□ -1.05
HDAC3-207ENST00000475549 MYO5AQ9Y4I1 1855 aaKnown RBP8.47□□□□□ -1.05
HDAC3-207ENST00000475549 GSG1L2A8MUP6 293 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 COBLO75128 1261 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 HOXC6P09630 235 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 COL6A1P12109 1028 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 CAPN2P17655 700 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 MAP2K5Q13163 448 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 GRB14Q14449 540 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 TMEM179Q6ZVK1 233 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 C16orf86Q6ZW13 317 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 NECAB2Q7Z6G3 386 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 SPICE1Q8N0Z3 855 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 ANKLE1Q8NAG6 615 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 TRPV1Q8NER1 839 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 OSBP2Q969R2 916 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 APBA2Q99767 749 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 MOV10L1Q9BXT6 1211 aaKnown RBP8.47□□□□□ -1.05
HDAC3-207ENST00000475549 NBPF3Q9H094 633 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 CHMP4BQ9H444 224 aaKnown RBP8.47□□□□□ -1.05
HDAC3-207ENST00000475549 ECHDC1Q9NTX5 307 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 HOXC10Q9NYD6 342 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 SWAP70Q9UH65 585 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 TMX2Q9Y320 296 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 NR2E3Q9Y5X4 410 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 SLC4A4Q9Y6R1 1079 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 PFASO15067 1338 aa8.47□□□□□ -1.05
HDAC3-207ENST00000475549 SLC15A5A6NIM6 579 aa8.46□□□□□ -1.06
HDAC3-207ENST00000475549 SOX1O00570 391 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-207ENST00000475549 EEF2P13639 858 aaKnown RBP8.46□□□□□ -1.06
HDAC3-207ENST00000475549 ZKSCAN1P17029 563 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-207ENST00000475549 ERCC3P19447 782 aa8.46□□□□□ -1.06
HDAC3-207ENST00000475549 DSG3P32926 999 aa8.46□□□□□ -1.06
HDAC3-207ENST00000475549 CYP2C19P33261 490 aa8.46□□□□□ -1.06
HDAC3-207ENST00000475549 CCNA1P78396 465 aa8.46□□□□□ -1.06
HDAC3-207ENST00000475549 CCAR1Q8IX12 1150 aaKnown RBP8.46□□□□□ -1.06
HDAC3-207ENST00000475549 TRMT44Q8IYL2 757 aaKnown RBP8.46□□□□□ -1.06
HDAC3-207ENST00000475549 OTUD7AQ8TE49 926 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-207ENST00000475549 GDF15Q99988 308 aa8.46□□□□□ -1.06
HDAC3-207ENST00000475549 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.46□□□□□ -1.062e-6■■□□□ 14.5
HDAC3-207ENST00000475549 C11orf49Q9H6J7 331 aa8.46□□□□□ -1.06
HDAC3-207ENST00000475549 ADAMTS5Q9UNA0 930 aa8.46□□□□□ -1.06
HDAC3-207ENST00000475549 TRIOBPQ9H2D6 2365 aa8.46□□□□□ -1.06
HDAC3-207ENST00000475549 DNAH12Q6ZR08 3092 aa8.45□□□□□ -1.06
HDAC3-207ENST00000475549 ICA1Q05084 483 aa8.45□□□□□ -1.06
HDAC3-207ENST00000475549 TMEM132BQ14DG7 1078 aa8.45□□□□□ -1.06
HDAC3-207ENST00000475549 WDR78Q5VTH9 848 aa8.45□□□□□ -1.06
HDAC3-207ENST00000475549 KBTBD3Q8NAB2 608 aa8.45□□□□□ -1.06
HDAC3-207ENST00000475549 ATG4CQ96DT6 458 aa8.45□□□□□ -1.06
HDAC3-207ENST00000475549 CCDC17Q96LX7 622 aa8.45□□□□□ -1.06
HDAC3-207ENST00000475549 TANGO6Q9C0B7 1094 aa8.45□□□□□ -1.06
HDAC3-207ENST00000475549 SPATC1LQ9H0A9 340 aa8.45□□□□□ -1.06
HDAC3-207ENST00000475549 VCPKMTQ9H867 229 aa8.45□□□□□ -1.06
HDAC3-207ENST00000475549 FBXO28Q9NVF7 368 aa8.45□□□□□ -1.06
HDAC3-207ENST00000475549 ZMYND8Q9ULU4 1186 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-207ENST00000475549 PLXNB2O15031 1838 aa8.45□□□□□ -1.06
HDAC3-207ENST00000475549 FOCADQ5VW36 1801 aa8.45□□□□□ -1.06
HDAC3-207ENST00000475549 MGAMO43451 1857 aa8.45□□□□□ -1.06
HDAC3-207ENST00000475549 CDK5RAP2Q96SN8 1893 aa8.45□□□□□ -1.06
HDAC3-207ENST00000475549 DOCK3Q8IZD9 2030 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 DDX60LQ5H9U9 1706 aaKnown RBP8.44□□□□□ -1.06
HDAC3-207ENST00000475549 M0R2C6 588 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 RNF113AO15541 343 aaKnown RBP8.44□□□□□ -1.06
HDAC3-207ENST00000475549 STRNO43815 780 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 FLOT1O75955 427 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 SYN1P17600 705 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 RASA1P20936 1047 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 ADORA2AP29274 412 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 ATP2B2Q01814 1243 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 LRRC26Q2I0M4 334 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 SBK1Q52WX2 424 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 PRAMEF19Q5SWL8 479 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 C7orf61Q8IZ16 206 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 STK11IPQ8N1F8 1099 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 REPS2Q8NFH8 660 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 PI4K2BQ8TCG2 481 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 LPAR1Q92633 364 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 SEC62Q99442 399 aaKnown RBP8.44□□□□□ -1.06
HDAC3-207ENST00000475549 KANSL2Q9H9L4 492 aa8.44□□□□□ -1.06
HDAC3-207ENST00000475549 EPB41L4AQ9HCS5 686 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-207ENST00000475549 ATAD5Q96QE3 1844 aa8.43□□□□□ -1.06
HDAC3-207ENST00000475549 IGKV6D-41A0A0C4DH26 115 aa8.43□□□□□ -1.06
HDAC3-207ENST00000475549 VWA5AO00534 786 aa8.43□□□□□ -1.06
HDAC3-207ENST00000475549 WDR46O15213 610 aaKnown RBP8.43□□□□□ -1.06
HDAC3-207ENST00000475549 FOXP2O15409 715 aa8.43□□□□□ -1.06
HDAC3-207ENST00000475549 GLRX3O76003 335 aaKnown RBP8.43□□□□□ -1.06
HDAC3-207ENST00000475549 CYBAP13498 195 aa8.43□□□□□ -1.06
HDAC3-207ENST00000475549 BMP8BP34820 402 aa8.43□□□□□ -1.06
HDAC3-207ENST00000475549 MFSD14CQ5VZR4 134 aa8.43□□□□□ -1.06
HDAC3-207ENST00000475549 OLFML2BQ68BL8 750 aa8.43□□□□□ -1.06
HDAC3-207ENST00000475549 ZSCAN25Q6NSZ9 544 aa8.43□□□□□ -1.06
HDAC3-207ENST00000475549 SHCBP1Q8NEM2 672 aa8.43□□□□□ -1.06
HDAC3-207ENST00000475549 APPBP2Q92624 585 aa8.43□□□□□ -1.06
HDAC3-207ENST00000475549 LRCH3Q96II8 777 aa8.43□□□□□ -1.06
HDAC3-207ENST00000475549 NUP88Q99567 741 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-207ENST00000475549 ARHGEF10LQ9HCE6 1279 aa8.43□□□□□ -1.06
HDAC3-207ENST00000475549 DDX20Q9UHI6 824 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms