RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 PLXNA1Q9UIW2 1896 aa21.94■■□□□ 1.1
RNF220-212ENST00000475378 CYP7A1P22680 504 aa21.93■■□□□ 1.1
RNF220-212ENST00000475378 EPHB4P54760 987 aa21.93■■□□□ 1.1
RNF220-212ENST00000475378 CCDC158Q5M9N0 1113 aa21.93■■□□□ 1.1
RNF220-212ENST00000475378 SHCBP1Q8NEM2 672 aa21.93■■□□□ 1.1
RNF220-212ENST00000475378 NAV1Q8NEY1 1877 aa21.93■■□□□ 1.1
RNF220-212ENST00000475378 COL11A1P12107 1806 aaPredicted RBP21.92■■□□□ 1.1
RNF220-212ENST00000475378 GNAI2P04899 355 aa21.92■■□□□ 1.1
RNF220-212ENST00000475378 SHMT1P34896 483 aa21.92■■□□□ 1.1
RNF220-212ENST00000475378 TLE2Q04725 743 aa21.92■■□□□ 1.1
RNF220-212ENST00000475378 FAM47AQ5JRC9 791 aa21.92■■□□□ 1.1
RNF220-212ENST00000475378 PRAMEF19Q5SWL8 479 aa21.92■■□□□ 1.1
RNF220-212ENST00000475378 USP38Q8NB14 1042 aa21.92■■□□□ 1.1
RNF220-212ENST00000475378 FERMT2Q96AC1 680 aa21.92■■□□□ 1.1
RNF220-212ENST00000475378 SPATC1LQ9H0A9 340 aa21.92■■□□□ 1.1
RNF220-212ENST00000475378 MYH8P13535 1937 aa21.91■■□□□ 1.1
RNF220-212ENST00000475378 ERCC3P19447 782 aa21.91■■□□□ 1.1
RNF220-212ENST00000475378 RARSP54136 660 aaKnown RBP21.91■■□□□ 1.1
RNF220-212ENST00000475378 TJAP1Q5JTD0 557 aa21.91■■□□□ 1.1
RNF220-212ENST00000475378 MIGA1Q8NAN2 632 aa21.91■■□□□ 1.1
RNF220-212ENST00000475378 RNPC3Q96LT9 517 aaKnown RBP21.91■■□□□ 1.1
RNF220-212ENST00000475378 PHF24Q9UPV7 400 aa21.91■■□□□ 1.1
RNF220-212ENST00000475378 TACC3Q9Y6A5 838 aa21.91■■□□□ 1.1
RNF220-212ENST00000475378 NCOR1O75376 2440 aa21.91■■□□□ 1.1
RNF220-212ENST00000475378 MYCNP04198 464 aaPredicted RBP21.9■■□□□ 1.1
RNF220-212ENST00000475378 USP5P45974 858 aa21.9■■□□□ 1.1
RNF220-212ENST00000475378 COG2Q14746 738 aa21.9■■□□□ 1.1
RNF220-212ENST00000475378 GRIN2CQ14957 1233 aa21.9■■□□□ 1.1
RNF220-212ENST00000475378 CABP5Q9NP86 173 aa21.9■■□□□ 1.1
RNF220-212ENST00000475378 HOXC10Q9NYD6 342 aa21.9■■□□□ 1.1
RNF220-212ENST00000475378 A0A1W2PRG0 241 aa21.89■■□□□ 1.09
RNF220-212ENST00000475378 KIAA0355O15063 1070 aa21.89■■□□□ 1.09
RNF220-212ENST00000475378 CLTBP09497 229 aa21.89■■□□□ 1.09
RNF220-212ENST00000475378 COL9A1P20849 921 aa21.89■■□□□ 1.09
RNF220-212ENST00000475378 PLCD1P51178 756 aa21.89■■□□□ 1.09
RNF220-212ENST00000475378 TTC6Q86TZ1 520 aa21.89■■□□□ 1.09
RNF220-212ENST00000475378 CERS3Q8IU89 383 aa21.89■■□□□ 1.09
RNF220-212ENST00000475378 TNFRSF10AO00220 468 aa21.88■■□□□ 1.09
RNF220-212ENST00000475378 GABPAQ06546 454 aa21.88■■□□□ 1.09
RNF220-212ENST00000475378 POLA2Q14181 598 aa21.88■■□□□ 1.09
RNF220-212ENST00000475378 SEPT2Q15019 361 aa21.88■■□□□ 1.09
RNF220-212ENST00000475378 ABRAQ8N0Z2 381 aa21.88■■□□□ 1.09
RNF220-212ENST00000475378 MAML3Q96JK9 1138 aa21.88■■□□□ 1.09
RNF220-212ENST00000475378 DNAJB2P25686 324 aa21.87■■□□□ 1.09
RNF220-212ENST00000475378 KIAA1755Q5JYT7 1200 aa21.87■■□□□ 1.09
RNF220-212ENST00000475378 MROH8Q9H579 483 aa21.87■■□□□ 1.09
RNF220-212ENST00000475378 SLC5A4Q9NY91 659 aa21.87■■□□□ 1.09
RNF220-212ENST00000475378 DBNLQ9UJU6 430 aaKnown RBP21.87■■□□□ 1.09
RNF220-212ENST00000475378 IDH1O75874 414 aaKnown RBP21.86■■□□□ 1.09
RNF220-212ENST00000475378 MAGEB6Q8N7X4 407 aa21.86■■□□□ 1.09
RNF220-212ENST00000475378 MB21D1Q8N884 522 aa21.86■■□□□ 1.09
RNF220-212ENST00000475378 TLR7Q9NYK1 1049 aaKnown RBP21.86■■□□□ 1.09
RNF220-212ENST00000475378 TNNQ9UQP3 1299 aa21.86■■□□□ 1.09
RNF220-212ENST00000475378 CHD9Q3L8U1 2897 aa21.85■■□□□ 1.09
RNF220-212ENST00000475378 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.85■■□□□ 1.09
RNF220-212ENST00000475378 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.85■■□□□ 1.09
RNF220-212ENST00000475378 TRIM27P14373 513 aa21.85■■□□□ 1.09
RNF220-212ENST00000475378 DSG3P32926 999 aa21.85■■□□□ 1.09
RNF220-212ENST00000475378 TANGO6Q9C0B7 1094 aa21.85■■□□□ 1.09
RNF220-212ENST00000475378 XPNPEP3Q9NQH7 507 aa21.85■■□□□ 1.09
RNF220-212ENST00000475378 NRBP1Q9UHY1 535 aa21.85■■□□□ 1.09
RNF220-212ENST00000475378 ROBO3Q96MS0 1386 aa21.85■■□□□ 1.09
RNF220-212ENST00000475378 A0A1W2PQ45 241 aaPredicted RBP21.84■■□□□ 1.09
RNF220-212ENST00000475378 A0A1W2PQY0 241 aa21.84■■□□□ 1.09
RNF220-212ENST00000475378 RAG1P15918 1043 aa21.84■■□□□ 1.09
RNF220-212ENST00000475378 EVX2Q03828 476 aa21.84■■□□□ 1.09
RNF220-212ENST00000475378 FPGSQ05932 587 aa21.84■■□□□ 1.09
RNF220-212ENST00000475378 NCAPG2Q86XI2 1143 aa21.84■■□□□ 1.09
RNF220-212ENST00000475378 SSH3Q8TE77 659 aa21.84■■□□□ 1.09
RNF220-212ENST00000475378 RIOK1Q9BRS2 568 aaKnown RBP21.84■■□□□ 1.09
RNF220-212ENST00000475378 ZNF576Q9H609 170 aa21.84■■□□□ 1.09
RNF220-212ENST00000475378 PQBP1O60828 265 aaKnown RBP21.83■■□□□ 1.09
RNF220-212ENST00000475378 PGK1P00558 417 aa21.83■■□□□ 1.09
RNF220-212ENST00000475378 RARBP10826 455 aa21.83■■□□□ 1.09
RNF220-212ENST00000475378 ANTXR1Q9H6X2 564 aa21.83■■□□□ 1.09
RNF220-212ENST00000475378 FAAP100Q0VG06 881 aa21.82■■□□□ 1.08
RNF220-212ENST00000475378 PLS1Q14651 629 aa21.82■■□□□ 1.08
RNF220-212ENST00000475378 TMED8Q6PL24 325 aaPredicted RBP21.82■■□□□ 1.08
RNF220-212ENST00000475378 ANKRD33Q7Z3H0 272 aa21.82■■□□□ 1.08
RNF220-212ENST00000475378 RNF180Q86T96 592 aa21.82■■□□□ 1.08
RNF220-212ENST00000475378 ATG4CQ96DT6 458 aa21.82■■□□□ 1.08
RNF220-212ENST00000475378 CCDC8Q9H0W5 538 aaPredicted RBP21.82■■□□□ 1.08
RNF220-212ENST00000475378 GBF1Q92538 1859 aa21.81■■□□□ 1.08
RNF220-212ENST00000475378 FCER1AP12319 257 aa21.81■■□□□ 1.08
RNF220-212ENST00000475378 OS9Q13438 667 aaPredicted RBP21.81■■□□□ 1.08
RNF220-212ENST00000475378 TOX2Q96NM4 488 aa21.81■■□□□ 1.08
RNF220-212ENST00000475378 TMEM39AQ9NV64 488 aa21.81■■□□□ 1.08
RNF220-212ENST00000475378 RAPGEFL1Q9UHV5 662 aa21.81■■□□□ 1.08
RNF220-212ENST00000475378 ADAMTS4O75173 837 aa21.8■■□□□ 1.08
RNF220-212ENST00000475378 SURF6O75683 361 aaKnown RBP21.8■■□□□ 1.08
RNF220-212ENST00000475378 FLOT1O75955 427 aa21.8■■□□□ 1.08
RNF220-212ENST00000475378 POLR3DP05423 398 aaPredicted RBP21.8■■□□□ 1.08
RNF220-212ENST00000475378 ZNF865P0CJ78 1059 aaPredicted RBP21.8■■□□□ 1.08
RNF220-212ENST00000475378 TAL1P17542 331 aaPredicted RBP21.8■■□□□ 1.08
RNF220-212ENST00000475378 ATP8B2P98198 1209 aa21.8■■□□□ 1.08
RNF220-212ENST00000475378 TMEM132BQ14DG7 1078 aa21.8■■□□□ 1.08
RNF220-212ENST00000475378 SIAH1Q8IUQ4 282 aa21.8■■□□□ 1.08
RNF220-212ENST00000475378 TIFAQ96CG3 184 aa21.8■■□□□ 1.08
RNF220-212ENST00000475378 EAF2Q96CJ1 260 aaPredicted RBP21.8■■□□□ 1.08
RNF220-212ENST00000475378 TINF2Q9BSI4 451 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms