RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 SPDYE16A6NNV3 312 aaPredicted RBP13.7□□□□□ -0.22
GPM6B-208ENST00000475307 CNMDO75829 334 aa13.7□□□□□ -0.22
GPM6B-208ENST00000475307 EEF2P13639 858 aaKnown RBP13.7□□□□□ -0.22
GPM6B-208ENST00000475307 LBX2Q6XYB7 198 aa13.7□□□□□ -0.22
GPM6B-208ENST00000475307 GPR142Q7Z601 462 aa13.7□□□□□ -0.22
GPM6B-208ENST00000475307 PLEKHH3Q7Z736 793 aa13.7□□□□□ -0.22
GPM6B-208ENST00000475307 IFNL3Q8IZI9 196 aa13.7□□□□□ -0.22
GPM6B-208ENST00000475307 SPICE1Q8N0Z3 855 aa13.7□□□□□ -0.22
GPM6B-208ENST00000475307 U2AF1L4Q8WU68 220 aaKnown RBP13.7□□□□□ -0.22
GPM6B-208ENST00000475307 SHISA4Q96DD7 197 aa13.7□□□□□ -0.22
GPM6B-208ENST00000475307 LNPKQ9C0E8 428 aa13.7□□□□□ -0.22
GPM6B-208ENST00000475307 VCPKMTQ9H867 229 aa13.7□□□□□ -0.22
GPM6B-208ENST00000475307 EPB41L4AQ9HCS5 686 aaPredicted RBP13.7□□□□□ -0.22
GPM6B-208ENST00000475307 HOXC10Q9NYD6 342 aa13.7□□□□□ -0.22
GPM6B-208ENST00000475307 SUPT16HQ9Y5B9 1047 aaKnown RBP13.7□□□□□ -0.22
GPM6B-208ENST00000475307 RAD21O60216 631 aa13.69□□□□□ -0.22
GPM6B-208ENST00000475307 SGPL1O95470 568 aa13.69□□□□□ -0.22
GPM6B-208ENST00000475307 HMGCRP04035 888 aa13.69□□□□□ -0.22
GPM6B-208ENST00000475307 RASA1P20936 1047 aa13.69□□□□□ -0.22
GPM6B-208ENST00000475307 KIAA1755Q5JYT7 1200 aa13.69□□□□□ -0.22
GPM6B-208ENST00000475307 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
GPM6B-208ENST00000475307 SMC5Q8IY18 1101 aa13.69□□□□□ -0.22
GPM6B-208ENST00000475307 ZNF444Q8N0Y2 327 aaPredicted RBP13.69□□□□□ -0.22
GPM6B-208ENST00000475307 DEFB118Q96PH6 123 aa13.69□□□□□ -0.22
GPM6B-208ENST00000475307 NAPBQ9H115 298 aa13.69□□□□□ -0.22
GPM6B-208ENST00000475307 ZNF287Q9HBT7 754 aa13.69□□□□□ -0.22
GPM6B-208ENST00000475307 BTBD7Q9P203 1132 aa13.69□□□□□ -0.22
GPM6B-208ENST00000475307 BAZ2AQ9UIF9 1905 aaKnown RBP13.68□□□□□ -0.22
GPM6B-208ENST00000475307 WDR46O15213 610 aaKnown RBP13.68□□□□□ -0.22
GPM6B-208ENST00000475307 FLOT1O75955 427 aa13.68□□□□□ -0.22
GPM6B-208ENST00000475307 IGHDP01880 384 aa13.68□□□□□ -0.22
GPM6B-208ENST00000475307 RGS2P41220 211 aa13.68□□□□□ -0.22
GPM6B-208ENST00000475307 TRIB2Q92519 343 aa13.68□□□□□ -0.22
GPM6B-208ENST00000475307 GOPCQ9HD26 462 aa13.68□□□□□ -0.22
GPM6B-208ENST00000475307 IVNS1ABPQ9Y6Y0 642 aa13.68□□□□□ -0.22
GPM6B-208ENST00000475307 ROBO3Q96MS0 1386 aa13.68□□□□□ -0.22
GPM6B-208ENST00000475307 TRIM6-TRIM34B2RNG4 842 aa13.67□□□□□ -0.22
GPM6B-208ENST00000475307 PRDM1O75626 825 aa13.67□□□□□ -0.22
GPM6B-208ENST00000475307 TFRCP02786 760 aaKnown RBP13.67□□□□□ -0.22
GPM6B-208ENST00000475307 SLC3A2P08195 630 aaKnown RBP13.67□□□□□ -0.22
GPM6B-208ENST00000475307 XRCC5P13010 732 aaKnown RBP13.67□□□□□ -0.22
GPM6B-208ENST00000475307 ZKSCAN1P17029 563 aaPredicted RBP13.67□□□□□ -0.22
GPM6B-208ENST00000475307 DSG3P32926 999 aa13.67□□□□□ -0.22
GPM6B-208ENST00000475307 TRIM32Q13049 653 aa13.67□□□□□ -0.22
GPM6B-208ENST00000475307 MORN1Q5T089 497 aa13.67□□□□□ -0.22
GPM6B-208ENST00000475307 CCDC129Q6ZRS4 1044 aa13.67□□□□□ -0.22
GPM6B-208ENST00000475307 CHD1LQ86WJ1 897 aa13.67□□□□□ -0.22
GPM6B-208ENST00000475307 TRMT44Q8IYL2 757 aaKnown RBP13.67□□□□□ -0.22
GPM6B-208ENST00000475307 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.67□□□□□ -0.22
GPM6B-208ENST00000475307 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.67□□□□□ -0.224e-8■■□□□ 12.3
GPM6B-208ENST00000475307 HMX1Q9NP08 348 aaPredicted RBP13.67□□□□□ -0.22
GPM6B-208ENST00000475307 PAK6Q9NQU5 681 aaPredicted RBP13.67□□□□□ -0.22
GPM6B-208ENST00000475307 RPTORQ8N122 1335 aa13.66□□□□□ -0.22
GPM6B-208ENST00000475307 SLC15A5A6NIM6 579 aa13.66□□□□□ -0.22
GPM6B-208ENST00000475307 FARP2O94887 1054 aaPredicted RBP13.66□□□□□ -0.22
GPM6B-208ENST00000475307 CENPBP07199 599 aaPredicted RBP13.66□□□□□ -0.22
GPM6B-208ENST00000475307 CAPN2P17655 700 aa13.66□□□□□ -0.22
GPM6B-208ENST00000475307 PTPREP23469 700 aa13.66□□□□□ -0.22
GPM6B-208ENST00000475307 PDE4BQ07343 736 aa13.66□□□□□ -0.22
GPM6B-208ENST00000475307 PPARAQ07869 468 aa13.66□□□□□ -0.22
GPM6B-208ENST00000475307 MAP2K5Q13163 448 aa13.66□□□□□ -0.22
GPM6B-208ENST00000475307 PLS1Q14651 629 aa13.66□□□□□ -0.22
GPM6B-208ENST00000475307 USP6NLQ92738 828 aa13.66□□□□□ -0.22
GPM6B-208ENST00000475307 RILPL2Q969X0 211 aa13.66□□□□□ -0.22
GPM6B-208ENST00000475307 ATG4CQ96DT6 458 aa13.66□□□□□ -0.22
GPM6B-208ENST00000475307 APBA2Q99767 749 aa13.66□□□□□ -0.22
GPM6B-208ENST00000475307 MOV10L1Q9BXT6 1211 aaKnown RBP13.66□□□□□ -0.22
GPM6B-208ENST00000475307 HELLSQ9NRZ9 838 aa13.66□□□□□ -0.22
GPM6B-208ENST00000475307 PRKAR2AP13861 404 aaKnown RBP13.65□□□□□ -0.22
GPM6B-208ENST00000475307 NUCB1Q02818 461 aa13.65□□□□□ -0.22
GPM6B-208ENST00000475307 CCL14Q16627 93 aa13.65□□□□□ -0.22
GPM6B-208ENST00000475307 FAM83BQ5T0W9 1011 aa13.65□□□□□ -0.22
GPM6B-208ENST00000475307 MB21D1Q8N884 522 aa13.65□□□□□ -0.22
GPM6B-208ENST00000475307 SPATC1LQ9H0A9 340 aa13.65□□□□□ -0.22
GPM6B-208ENST00000475307 NYAP2Q9P242 653 aa13.65□□□□□ -0.22
GPM6B-208ENST00000475307 CLIP2Q9UDT6 1046 aa13.65□□□□□ -0.22
GPM6B-208ENST00000475307 HTTP42858 3142 aa13.64□□□□□ -0.23
GPM6B-208ENST00000475307 TSPY3P0CV98 308 aa13.64□□□□□ -0.23
GPM6B-208ENST00000475307 TSPY8P0CW00 308 aa13.64□□□□□ -0.23
GPM6B-208ENST00000475307 TFAP4Q01664 338 aa13.64□□□□□ -0.23
GPM6B-208ENST00000475307 NCAPG2Q86XI2 1143 aa13.64□□□□□ -0.23
GPM6B-208ENST00000475307 SHCBP1Q8NEM2 672 aa13.64□□□□□ -0.23
GPM6B-208ENST00000475307 DPF3Q92784 378 aa13.64□□□□□ -0.23
GPM6B-208ENST00000475307 FAM227BQ96M60 508 aa13.64□□□□□ -0.23
GPM6B-208ENST00000475307 HTATIP2Q9BUP3 242 aa13.64□□□□□ -0.23
GPM6B-208ENST00000475307 CRISPLD2Q9H0B8 497 aa13.64□□□□□ -0.23
GPM6B-208ENST00000475307 FBXO28Q9NVF7 368 aa13.64□□□□□ -0.23
GPM6B-208ENST00000475307 MYH8P13535 1937 aa13.63□□□□□ -0.23
GPM6B-208ENST00000475307 IGKV6D-41A0A0C4DH26 115 aa13.63□□□□□ -0.23
GPM6B-208ENST00000475307 A0A0D9SFI3 127 aa13.63□□□□□ -0.23
GPM6B-208ENST00000475307 F5H6K3 240 aa13.63□□□□□ -0.23
GPM6B-208ENST00000475307 STRNO43815 780 aa13.63□□□□□ -0.23
GPM6B-208ENST00000475307 ERCC3P19447 782 aa13.63□□□□□ -0.23
GPM6B-208ENST00000475307 KLRC3Q07444 240 aa13.63□□□□□ -0.23
GPM6B-208ENST00000475307 CACNB2Q08289 660 aaPredicted RBP13.63□□□□□ -0.23
GPM6B-208ENST00000475307 NMIQ13287 307 aaPredicted RBP13.63□□□□□ -0.23
GPM6B-208ENST00000475307 GRB14Q14449 540 aa13.63□□□□□ -0.23
GPM6B-208ENST00000475307 MCMDC2Q4G0Z9 681 aa13.63□□□□□ -0.23
GPM6B-208ENST00000475307 FAM47AQ5JRC9 791 aa13.63□□□□□ -0.23
GPM6B-208ENST00000475307 MAP3K21Q5TCX8 1036 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms