RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 UNC80Q8N2C7 3258 aa15.31■□□□□ 0.04
SKA3-206ENST00000475251 POLR3DP05423 398 aaPredicted RBP15.31■□□□□ 0.04
SKA3-206ENST00000475251 ADORA2AP29274 412 aa15.31■□□□□ 0.04
SKA3-206ENST00000475251 GJC2Q5T442 439 aaPredicted RBP15.31■□□□□ 0.04
SKA3-206ENST00000475251 IGHA2P01877 340 aa15.3■□□□□ 0.04
SKA3-206ENST00000475251 SHMT1P34896 483 aa15.3■□□□□ 0.04
SKA3-206ENST00000475251 SMAD3P84022 425 aaKnown RBP15.3■□□□□ 0.04
SKA3-206ENST00000475251 RLFQ13129 1914 aa15.3■□□□□ 0.04
SKA3-206ENST00000475251 SNX17Q15036 470 aa15.3■□□□□ 0.04
SKA3-206ENST00000475251 C1orf53Q5VUE5 145 aa15.3■□□□□ 0.04
SKA3-206ENST00000475251 ZKSCAN2Q63HK3 967 aa15.3■□□□□ 0.04
SKA3-206ENST00000475251 ABRAQ8N0Z2 381 aa15.3■□□□□ 0.04
SKA3-206ENST00000475251 TRPV1Q8NER1 839 aa15.3■□□□□ 0.04
SKA3-206ENST00000475251 CDX2Q99626 313 aaPredicted RBP15.3■□□□□ 0.04
SKA3-206ENST00000475251 MOV10L1Q9BXT6 1211 aaKnown RBP15.3■□□□□ 0.04
SKA3-206ENST00000475251 TANGO6Q9C0B7 1094 aa15.3■□□□□ 0.04
SKA3-206ENST00000475251 SPATC1LQ9H0A9 340 aa15.3■□□□□ 0.04
SKA3-206ENST00000475251 MROH8Q9H579 483 aa15.3■□□□□ 0.04
SKA3-206ENST00000475251 NOP58Q9Y2X3 529 aaKnown RBP15.3■□□□□ 0.04
SKA3-206ENST00000475251 MPHOSPH10O00566 681 aaKnown RBP15.29■□□□□ 0.04
SKA3-206ENST00000475251 ERCC3P19447 782 aa15.29■□□□□ 0.04
SKA3-206ENST00000475251 TTF1Q15361 905 aaPredicted RBP15.29■□□□□ 0.04
SKA3-206ENST00000475251 SHHQ15465 462 aa15.29■□□□□ 0.04
SKA3-206ENST00000475251 TMEM57Q8N5G2 664 aa15.29■□□□□ 0.04
SKA3-206ENST00000475251 MAFAQ8NHW3 353 aaPredicted RBP15.29■□□□□ 0.04
SKA3-206ENST00000475251 CCDC8Q9H0W5 538 aaPredicted RBP15.29■□□□□ 0.04
SKA3-206ENST00000475251 SEMA6BQ9H3T3 888 aa15.29■□□□□ 0.04
SKA3-206ENST00000475251 SH2D4AQ9H788 454 aa15.29■□□□□ 0.04
SKA3-206ENST00000475251 DNAH12Q6ZR08 3092 aa15.29■□□□□ 0.04
SKA3-206ENST00000475251 TMEM265A0A087WTH1 108 aa15.28■□□□□ 0.04
SKA3-206ENST00000475251 MAGEB6P1A0A0J9YX57 407 aa15.28■□□□□ 0.04
SKA3-206ENST00000475251 BCAR3O75815 825 aa15.28■□□□□ 0.04
SKA3-206ENST00000475251 PLCD1P51178 756 aa15.28■□□□□ 0.04
SKA3-206ENST00000475251 SEPT2Q15019 361 aa15.28■□□□□ 0.04
SKA3-206ENST00000475251 TRIM60Q495X7 471 aa15.28■□□□□ 0.04
SKA3-206ENST00000475251 TMEM179Q6ZVK1 233 aa15.28■□□□□ 0.04
SKA3-206ENST00000475251 ERC1Q8IUD2 1116 aa15.28■□□□□ 0.04
SKA3-206ENST00000475251 BADQ92934 168 aa15.28■□□□□ 0.04
SKA3-206ENST00000475251 EAF2Q96CJ1 260 aaPredicted RBP15.28■□□□□ 0.04
SKA3-206ENST00000475251 CRNKL1Q9BZJ0 848 aaKnown RBP15.28■□□□□ 0.04
SKA3-206ENST00000475251 TLR7Q9NYK1 1049 aaKnown RBP15.28■□□□□ 0.04
SKA3-206ENST00000475251 NRBP1Q9UHY1 535 aa15.28■□□□□ 0.04
SKA3-206ENST00000475251 NAV1Q8NEY1 1877 aa15.27■□□□□ 0.04
SKA3-206ENST00000475251 A0A0G2JMZ2 1700 aa15.27■□□□□ 0.04
SKA3-206ENST00000475251 GUCY1A2P33402 732 aa15.27■□□□□ 0.04
SKA3-206ENST00000475251 GABPAQ06546 454 aa15.27■□□□□ 0.04
SKA3-206ENST00000475251 PLS1Q14651 629 aa15.27■□□□□ 0.04
SKA3-206ENST00000475251 NCAPG2Q86XI2 1143 aa15.27■□□□□ 0.04
SKA3-206ENST00000475251 FTSJ3Q8IY81 847 aaKnown RBP15.27■□□□□ 0.04
SKA3-206ENST00000475251 SYMPKQ92797 1274 aaKnown RBP15.27■□□□□ 0.04
SKA3-206ENST00000475251 RIOK1Q9BRS2 568 aaKnown RBP15.27■□□□□ 0.04
SKA3-206ENST00000475251 ARHGEF10LQ9HCE6 1279 aa15.27■□□□□ 0.04
SKA3-206ENST00000475251 PDLIM7Q9NR12 457 aa15.27■□□□□ 0.04
SKA3-206ENST00000475251 SWAP70Q9UH65 585 aa15.27■□□□□ 0.04
SKA3-206ENST00000475251 TNNQ9UQP3 1299 aa15.27■□□□□ 0.04
SKA3-206ENST00000475251 TACC3Q9Y6A5 838 aa15.27■□□□□ 0.04
SKA3-206ENST00000475251 COBLO75128 1261 aa15.26■□□□□ 0.03
SKA3-206ENST00000475251 SLC25A27O95847 323 aa15.26■□□□□ 0.03
SKA3-206ENST00000475251 RARBP10826 455 aa15.26■□□□□ 0.03
SKA3-206ENST00000475251 FCER1AP12319 257 aa15.26■□□□□ 0.03
SKA3-206ENST00000475251 ADCYAP1R1P41586 468 aa15.26■□□□□ 0.03
SKA3-206ENST00000475251 LRRC41Q15345 812 aa15.26■□□□□ 0.03
SKA3-206ENST00000475251 C9orf50Q5SZB4 431 aa15.26■□□□□ 0.03
SKA3-206ENST00000475251 ANO1Q5XXA6 986 aa15.26■□□□□ 0.03
SKA3-206ENST00000475251 ANTXR1Q9H6X2 564 aa15.26■□□□□ 0.03
SKA3-206ENST00000475251 MCM9Q9NXL9 1143 aa15.26■□□□□ 0.03
SKA3-206ENST00000475251 A0A1W2PRG0 241 aa15.25■□□□□ 0.03
SKA3-206ENST00000475251 FLOT1O75955 427 aa15.25■□□□□ 0.03
SKA3-206ENST00000475251 FOSL2P15408 326 aa15.25■□□□□ 0.03
SKA3-206ENST00000475251 RNF180Q86T96 592 aa15.25■□□□□ 0.03
SKA3-206ENST00000475251 MAML3Q96JK9 1138 aa15.25■□□□□ 0.03
SKA3-206ENST00000475251 LAMA2P24043 3122 aaKnown RBP15.24■□□□□ 0.03
SKA3-206ENST00000475251 WDR46O15213 610 aaKnown RBP15.24■□□□□ 0.03
SKA3-206ENST00000475251 CLTBP09497 229 aa15.24■□□□□ 0.03
SKA3-206ENST00000475251 HSP90AB4PQ58FF6 505 aa15.24■□□□□ 0.03
SKA3-206ENST00000475251 FAM47AQ5JRC9 791 aa15.24■□□□□ 0.03
SKA3-206ENST00000475251 SLC9C2Q5TAH2 1124 aa15.24■□□□□ 0.03
SKA3-206ENST00000475251 AACSQ86V21 672 aa15.24■□□□□ 0.03
SKA3-206ENST00000475251 MYLIPQ8WY64 445 aa15.24■□□□□ 0.03
SKA3-206ENST00000475251 FERMT2Q96AC1 680 aa15.24■□□□□ 0.03
SKA3-206ENST00000475251 RNPC3Q96LT9 517 aaKnown RBP15.24■□□□□ 0.03
SKA3-206ENST00000475251 C1orf115Q9H7X2 142 aa15.24■□□□□ 0.03
SKA3-206ENST00000475251 XPNPEP3Q9NQH7 507 aa15.24■□□□□ 0.03
SKA3-206ENST00000475251 PHF24Q9UPV7 400 aa15.24■□□□□ 0.03
SKA3-206ENST00000475251 ROBO3Q96MS0 1386 aa15.24■□□□□ 0.03
SKA3-206ENST00000475251 TRIM43BA6NCK2 446 aa15.23■□□□□ 0.03
SKA3-206ENST00000475251 COPB2P35606 906 aa15.23■□□□□ 0.03
SKA3-206ENST00000475251 TLE2Q04725 743 aa15.23■□□□□ 0.03
SKA3-206ENST00000475251 ICA1Q05084 483 aa15.23■□□□□ 0.03
SKA3-206ENST00000475251 ITPRIPQ8IWB1 547 aa15.23■□□□□ 0.03
SKA3-206ENST00000475251 AMOTL1Q8IY63 956 aa15.23■□□□□ 0.03
SKA3-206ENST00000475251 TRIM43Q96BQ3 446 aaPredicted RBP15.23■□□□□ 0.03
SKA3-206ENST00000475251 CCDC17Q96LX7 622 aa15.23■□□□□ 0.03
SKA3-206ENST00000475251 TTYH1Q9H313 450 aaPredicted RBP15.23■□□□□ 0.03
SKA3-206ENST00000475251 VCPKMTQ9H867 229 aa15.23■□□□□ 0.03
SKA3-206ENST00000475251 DIS3Q9Y2L1 958 aaKnown RBP15.23■□□□□ 0.03
SKA3-206ENST00000475251 TMX2Q9Y320 296 aa15.23■□□□□ 0.03
SKA3-206ENST00000475251 CCER2I3L3R5 266 aa15.22■□□□□ 0.03
SKA3-206ENST00000475251 RAG1P15918 1043 aa15.22■□□□□ 0.03
SKA3-206ENST00000475251 PDE6AP16499 860 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms