RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 NLRP12P59046 1061 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 CNNM3Q8NE01 707 aa14.23□□□□□ -0.13
RNF220-211ENST00000474956 SERPINB2P05120 415 aa14.22□□□□□ -0.13
RNF220-211ENST00000474956 GOLGA8HP0CJ92 632 aa14.22□□□□□ -0.13
RNF220-211ENST00000474956 SFPQP23246 707 aaKnown RBP eCLIP14.22□□□□□ -0.13
RNF220-211ENST00000474956 KRBA2Q6ZNG9 492 aa14.22□□□□□ -0.13
RNF220-211ENST00000474956 TMTC3Q6ZXV5 915 aa14.22□□□□□ -0.13
RNF220-211ENST00000474956 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.22□□□□□ -0.13
RNF220-211ENST00000474956 POLLQ9UGP5 575 aa14.22□□□□□ -0.13
RNF220-211ENST00000474956 MKRN1Q9UHC7 482 aaKnown RBP14.22□□□□□ -0.13
RNF220-211ENST00000474956 TRMT44Q8IYL2 757 aaKnown RBP14.22□□□□□ -0.13
RNF220-211ENST00000474956 TMTC2Q8N394 836 aa14.22□□□□□ -0.13
RNF220-211ENST00000474956 PPP1R13BQ96KQ4 1090 aa14.22□□□□□ -0.13
RNF220-211ENST00000474956 PHF20Q9BVI0 1012 aa14.22□□□□□ -0.13
RNF220-211ENST00000474956 FOXP1Q9H334 677 aaPredicted RBP14.22□□□□□ -0.13
RNF220-211ENST00000474956 AKAP17AQ02040 695 aaKnown RBP14.21□□□□□ -0.13
RNF220-211ENST00000474956 TYW1BQ6NUM6 668 aa14.21□□□□□ -0.13
RNF220-211ENST00000474956 TMC6Q7Z403 805 aa14.21□□□□□ -0.13
RNF220-211ENST00000474956 PROM2Q8N271 834 aa14.21□□□□□ -0.13
RNF220-211ENST00000474956 RPGRQ92834 1020 aaKnown RBP14.21□□□□□ -0.13
RNF220-211ENST00000474956 RNF26Q9BY78 433 aaPredicted RBP14.21□□□□□ -0.13
RNF220-211ENST00000474956 CCDC196A0A1B0GTZ2 297 aa14.21□□□□□ -0.13
RNF220-211ENST00000474956 RIMBP2O15034 1052 aa14.21□□□□□ -0.13
RNF220-211ENST00000474956 SEMA3EO15041 775 aa14.21□□□□□ -0.13
RNF220-211ENST00000474956 CUTAO60888 179 aa14.21□□□□□ -0.13
RNF220-211ENST00000474956 CDC25AP30304 524 aa14.21□□□□□ -0.13
RNF220-211ENST00000474956 WASF1Q92558 559 aa14.21□□□□□ -0.13
RNF220-211ENST00000474956 LAMB1P07942 1786 aa14.21□□□□□ -0.14
RNF220-211ENST00000474956 F8W031 263 aaPredicted RBP14.21□□□□□ -0.14
RNF220-211ENST00000474956 PTPREP23469 700 aa14.21□□□□□ -0.14
RNF220-211ENST00000474956 FAM193AP78312 1265 aa14.21□□□□□ -0.14
RNF220-211ENST00000474956 MDM2Q00987 491 aaPredicted RBP14.21□□□□□ -0.14
RNF220-211ENST00000474956 ARMCX5Q6P1M9 558 aa14.21□□□□□ -0.14
RNF220-211ENST00000474956 TMEM232C9JQI7 657 aa14.2□□□□□ -0.14
RNF220-211ENST00000474956 TUBE1Q9UJT0 475 aa14.2□□□□□ -0.14
RNF220-211ENST00000474956 UBR3Q6ZT12 1888 aa14.2□□□□□ -0.14
RNF220-211ENST00000474956 FMR1Q06787 632 aaKnown RBP eCLIP14.2□□□□□ -0.14
RNF220-211ENST00000474956 C12orf60Q5U649 245 aa14.2□□□□□ -0.14
RNF220-211ENST00000474956 PIK3AP1Q6ZUJ8 805 aa14.2□□□□□ -0.14
RNF220-211ENST00000474956 JMYQ8N9B5 988 aa14.2□□□□□ -0.14
RNF220-211ENST00000474956 CD209Q9NNX6 404 aa14.2□□□□□ -0.14
RNF220-211ENST00000474956 ATP8A2Q9NTI2 1148 aa14.2□□□□□ -0.14
RNF220-211ENST00000474956 XDHP47989 1333 aa14.2□□□□□ -0.14
RNF220-211ENST00000474956 FAM205AQ6ZU69 1335 aa14.2□□□□□ -0.14
RNF220-211ENST00000474956 CCP110O43303 1012 aa14.2□□□□□ -0.14
RNF220-211ENST00000474956 AFMP43652 599 aa14.2□□□□□ -0.14
RNF220-211ENST00000474956 SYT10Q6XYQ8 523 aa14.2□□□□□ -0.14
RNF220-211ENST00000474956 CLEC10AQ8IUN9 316 aa14.2□□□□□ -0.14
RNF220-211ENST00000474956 SMYD4Q8IYR2 804 aaPredicted RBP14.2□□□□□ -0.14
RNF220-211ENST00000474956 DHX58Q96C10 678 aa14.2□□□□□ -0.14
RNF220-211ENST00000474956 MED15Q96RN5 788 aa14.2□□□□□ -0.14
RNF220-211ENST00000474956 QTRT2Q9H974 415 aaKnown RBP14.2□□□□□ -0.14
RNF220-211ENST00000474956 PRPF3O43395 683 aaKnown RBP14.19□□□□□ -0.14
RNF220-211ENST00000474956 ORC4O43929 436 aa14.19□□□□□ -0.14
RNF220-211ENST00000474956 H2AFXP16104 143 aaPredicted RBP14.19□□□□□ -0.14
RNF220-211ENST00000474956 KRT2P35908 639 aa14.19□□□□□ -0.14
RNF220-211ENST00000474956 BMS1Q14692 1282 aaKnown RBP14.19□□□□□ -0.14
RNF220-211ENST00000474956 CCDC93Q567U6 631 aa14.19□□□□□ -0.14
RNF220-211ENST00000474956 RILPL1Q5EBL4 403 aa14.19□□□□□ -0.14
RNF220-211ENST00000474956 FANCLQ9NW38 375 aa14.19□□□□□ -0.14
RNF220-211ENST00000474956 SPATA31A6Q5VVP1 1343 aa14.19□□□□□ -0.14
RNF220-211ENST00000474956 DLEC1Q9Y238 1755 aa14.19□□□□□ -0.14
RNF220-211ENST00000474956 BTDP43251 543 aa14.19□□□□□ -0.14
RNF220-211ENST00000474956 CREBRFQ8IUR6 639 aa14.19□□□□□ -0.14
RNF220-211ENST00000474956 TNFRSF25Q93038 417 aa14.19□□□□□ -0.14
RNF220-211ENST00000474956 RTFDC1Q9BY42 306 aaPredicted RBP14.19□□□□□ -0.14
RNF220-211ENST00000474956 STX8Q9UNK0 236 aa14.19□□□□□ -0.14
RNF220-211ENST00000474956 IL17AQ16552 155 aa14.18□□□□□ -0.14
RNF220-211ENST00000474956 ERCC6LQ2NKX8 1250 aa14.18□□□□□ -0.14
RNF220-211ENST00000474956 CTCFLQ8NI51 663 aaPredicted RBP14.18□□□□□ -0.14
RNF220-211ENST00000474956 ARPP21Q9UBL0 812 aaPredicted RBP14.18□□□□□ -0.14
RNF220-211ENST00000474956 MAN1B1Q9UKM7 699 aa14.18□□□□□ -0.14
RNF220-211ENST00000474956 FAM237AA0A1B0GTK4 181 aa14.18□□□□□ -0.14
RNF220-211ENST00000474956 VWA3AA6NCI4 1184 aa14.18□□□□□ -0.14
RNF220-211ENST00000474956 IKBKBO14920 756 aa14.18□□□□□ -0.14
RNF220-211ENST00000474956 CYTH3O43739 400 aa14.18□□□□□ -0.14
RNF220-211ENST00000474956 SYMPKQ92797 1274 aaKnown RBP14.18□□□□□ -0.14
RNF220-211ENST00000474956 CCDC66A2RUB6 948 aa14.18□□□□□ -0.14
RNF220-211ENST00000474956 C6orf229H3BNL8 230 aa14.18□□□□□ -0.14
RNF220-211ENST00000474956 ACTN4O43707 911 aaKnown RBP14.18□□□□□ -0.14
RNF220-211ENST00000474956 MCM7P33993 719 aa14.18□□□□□ -0.14
RNF220-211ENST00000474956 PNMA1Q8ND90 353 aa14.18□□□□□ -0.14
RNF220-211ENST00000474956 MKNK2Q9HBH9 465 aa14.18□□□□□ -0.14
RNF220-211ENST00000474956 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.18□□□□□ -0.14
RNF220-211ENST00000474956 POSTNQ15063 836 aa14.17□□□□□ -0.14
RNF220-211ENST00000474956 MFSD14BQ5SR56 506 aa14.17□□□□□ -0.14
RNF220-211ENST00000474956 ZNF446Q9NWS9 450 aa14.17□□□□□ -0.14
RNF220-211ENST00000474956 SRPRBQ9Y5M8 271 aaKnown RBP14.17□□□□□ -0.14
RNF220-211ENST00000474956 CDK5RAP2Q96SN8 1893 aa14.17□□□□□ -0.14
RNF220-211ENST00000474956 TRIM75PA6NK02 468 aa14.17□□□□□ -0.14
RNF220-211ENST00000474956 ETF1P62495 437 aaKnown RBP14.17□□□□□ -0.14
RNF220-211ENST00000474956 FANCCQ00597 558 aa14.17□□□□□ -0.14
RNF220-211ENST00000474956 PTGDRQ13258 359 aa14.17□□□□□ -0.14
RNF220-211ENST00000474956 HOMER1Q86YM7 354 aa14.17□□□□□ -0.14
RNF220-211ENST00000474956 TIGD1Q96MW7 591 aa14.17□□□□□ -0.14
RNF220-211ENST00000474956 LEMD3Q9Y2U8 911 aa14.17□□□□□ -0.14
RNF220-211ENST00000474956 NLRP5P59047 1200 aa14.17□□□□□ -0.14
RNF220-211ENST00000474956 CRY2Q49AN0 593 aa14.17□□□□□ -0.14
RNF220-211ENST00000474956 SBK1Q52WX2 424 aa14.17□□□□□ -0.14
RNF220-211ENST00000474956 MSL1Q68DK7 614 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms