RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 TSHZ3Q63HK5 1081 aa7.19□□□□□ -1.26
CPSF7-210ENST00000474684 THSD4Q6ZMP0 1018 aa7.19□□□□□ -1.26
CPSF7-210ENST00000474684 UBE2Q1Q7Z7E8 422 aa7.19□□□□□ -1.26
CPSF7-210ENST00000474684 NBPF11Q86T75 865 aa7.19□□□□□ -1.26
CPSF7-210ENST00000474684 CLASRPQ8N2M8 674 aaKnown RBP7.19□□□□□ -1.26
CPSF7-210ENST00000474684 DIS3LQ8TF46 1054 aaKnown RBP7.19□□□□□ -1.26
CPSF7-210ENST00000474684 U2AF1L4Q8WU68 220 aaKnown RBP7.19□□□□□ -1.26
CPSF7-210ENST00000474684 TRIB2Q92519 343 aa7.19□□□□□ -1.26
CPSF7-210ENST00000474684 TRIM34Q9BYJ4 488 aa7.19□□□□□ -1.26
CPSF7-210ENST00000474684 RNF208Q9H0X6 261 aa7.19□□□□□ -1.26
CPSF7-210ENST00000474684 EHD4Q9H223 541 aa7.19□□□□□ -1.26
CPSF7-210ENST00000474684 PORCNQ9H237 461 aa7.19□□□□□ -1.26
CPSF7-210ENST00000474684 BOLA2Q9H3K6 86 aa7.19□□□□□ -1.26
CPSF7-210ENST00000474684 ARMT1Q9H993 441 aa7.19□□□□□ -1.26
CPSF7-210ENST00000474684 AS3MTQ9HBK9 375 aa7.19□□□□□ -1.26
CPSF7-210ENST00000474684 MORF4L1Q9UBU8 362 aa7.19□□□□□ -1.26
CPSF7-210ENST00000474684 SERPINB13Q9UIV8 391 aa7.19□□□□□ -1.26
CPSF7-210ENST00000474684 VPS9D1Q9Y2B5 631 aa7.19□□□□□ -1.26
CPSF7-210ENST00000474684 DNAH12Q6ZR08 3092 aa7.19□□□□□ -1.26
CPSF7-210ENST00000474684 MAGEB6P1A0A0J9YX57 407 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 USP17L10C9JJH3 530 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 HMMRO75330 724 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 CNMDO75829 334 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 FARP2O94887 1054 aaPredicted RBP7.18□□□□□ -1.26
CPSF7-210ENST00000474684 MBD4O95243 580 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 GJB1P08034 283 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 VCAM1P19320 739 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 HOXD10P28358 340 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 ADD2P35612 726 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 GJA8P48165 433 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 IRX3P78415 501 aaPredicted RBP7.18□□□□□ -1.26
CPSF7-210ENST00000474684 IRF5Q13568 498 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 SEPT2Q15019 361 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 KIAA1755Q5JYT7 1200 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 SLC9C2Q5TAH2 1124 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 TATDN1Q6P1N9 297 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 Q6ZNB5 142 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 FOXP4Q8IVH2 680 aaPredicted RBP7.18□□□□□ -1.26
CPSF7-210ENST00000474684 RPAP2Q8IXW5 612 aaPredicted RBP7.18□□□□□ -1.26
CPSF7-210ENST00000474684 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.18□□□□□ -1.26
CPSF7-210ENST00000474684 DYNLL2Q96FJ2 89 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 C12orf42Q96LP6 360 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 DEFB118Q96PH6 123 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 P2RX7Q99572 595 aaKnown RBP7.18□□□□□ -1.26
CPSF7-210ENST00000474684 FEZ1Q99689 392 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 PAGR1Q9BTK6 254 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 TBC1D2Q9BYX2 928 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 DCP1AQ9NPI6 582 aaPredicted RBP7.18□□□□□ -1.26
CPSF7-210ENST00000474684 PAG1Q9NWQ8 432 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 BIN2Q9UBW5 565 aaPredicted RBP7.18□□□□□ -1.26
CPSF7-210ENST00000474684 MYO9BQ13459 2157 aa7.18□□□□□ -1.26
CPSF7-210ENST00000474684 A0A1W2PRG0 241 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 H0YGN5 161 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 IFIT2P09913 472 aaKnown RBP7.17□□□□□ -1.26
CPSF7-210ENST00000474684 MS4A1P11836 297 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 AKR1B1P15121 316 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 HOXA7P31268 230 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-210ENST00000474684 GCLCP48506 637 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-210ENST00000474684 UBXN2AP68543 259 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 LAPTM4AQ15012 233 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 RAB3GAP1Q15042 981 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 CCL14Q16627 93 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 ABCB5Q2M3G0 1257 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 Q3C1V9 767 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 HSP90AB4PQ58FF6 505 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 HABP4Q5JVS0 413 aaKnown RBP7.17□□□□□ -1.26
CPSF7-210ENST00000474684 OTUD7AQ8TE49 926 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-210ENST00000474684 PXYLP1Q8TE99 480 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 COA7Q96BR5 231 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.17□□□□□ -1.268e-11■□□□□ 11.2
CPSF7-210ENST00000474684 PAK6Q9NQU5 681 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-210ENST00000474684 MCM9Q9NXL9 1143 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 TMOD4Q9NZQ9 345 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 RBPJLQ9UBG7 517 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 GJD2Q9UKL4 321 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 STK24Q9Y6E0 443 aa7.17□□□□□ -1.26
CPSF7-210ENST00000474684 GBF1Q92538 1859 aa7.16□□□□□ -1.26
CPSF7-210ENST00000474684 GOLGA8CPA6NN73 597 aa7.16□□□□□ -1.26
CPSF7-210ENST00000474684 SPDYE16A6NNV3 312 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-210ENST00000474684 C19orf81C9J6K1 198 aa7.16□□□□□ -1.26
CPSF7-210ENST00000474684 IGSF3O75054 1194 aa7.16□□□□□ -1.26
CPSF7-210ENST00000474684 RAB11FIP3O75154 756 aa7.16□□□□□ -1.26
CPSF7-210ENST00000474684 HMGCRP04035 888 aa7.16□□□□□ -1.26
CPSF7-210ENST00000474684 ATP5JP18859 108 aa7.16□□□□□ -1.26
CPSF7-210ENST00000474684 CYP2B6P20813 491 aa7.16□□□□□ -1.26
CPSF7-210ENST00000474684 FXR1P51114 621 aaKnown RBP eCLIP7.16□□□□□ -1.26
CPSF7-210ENST00000474684 ERVK-9P63128 1117 aa7.16□□□□□ -1.26
CPSF7-210ENST00000474684 ERVK-24P63145 666 aa7.16□□□□□ -1.26
CPSF7-210ENST00000474684 PABPC4Q13310 644 aaKnown RBP eCLIP7.16□□□□□ -1.26
CPSF7-210ENST00000474684 PDE3AQ14432 1141 aa7.16□□□□□ -1.26
CPSF7-210ENST00000474684 TTF1Q15361 905 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-210ENST00000474684 CERKLQ49MI3 558 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-210ENST00000474684 USP17L2Q6R6M4 530 aa7.16□□□□□ -1.26
CPSF7-210ENST00000474684 GPR142Q7Z601 462 aa7.16□□□□□ -1.26
CPSF7-210ENST00000474684 KCNK17Q96T54 332 aa7.16□□□□□ -1.26
CPSF7-210ENST00000474684 HAUS7Q99871 368 aa7.16□□□□□ -1.26
CPSF7-210ENST00000474684 CRNKL1Q9BZJ0 848 aaKnown RBP7.16□□□□□ -1.26
CPSF7-210ENST00000474684 PUS7LQ9H0K6 701 aaKnown RBP7.16□□□□□ -1.26
CPSF7-210ENST00000474684 EPB41L4AQ9HCS5 686 aaPredicted RBP7.16□□□□□ -1.26
CPSF7-210ENST00000474684 GINM1Q9NU53 330 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms