RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 IRF6O14896 467 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 ORC4O43929 436 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 SEPT2Q15019 361 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 TAF1CQ15572 869 aaPredicted RBP8.3□□□□□ -1.08
LIMD1-204ENST00000474665 CERKLQ49MI3 558 aaPredicted RBP8.3□□□□□ -1.08
LIMD1-204ENST00000474665 AKNAD1Q5T1N1 836 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 ERO1BQ86YB8 467 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 KCNB2Q92953 911 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 OPTNQ96CV9 577 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 USP26Q9BXU7 913 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 UBE2OQ9C0C9 1292 aaKnown RBP8.3□□□□□ -1.08
LIMD1-204ENST00000474665 ZFYVE28Q9HCC9 887 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 ANO2Q9NQ90 1003 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 IL17RBQ9NRM6 502 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 BIN2Q9UBW5 565 aaPredicted RBP8.3□□□□□ -1.08
LIMD1-204ENST00000474665 SWAP70Q9UH65 585 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 TAOK2Q9UL54 1235 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 KCNH4Q9UQ05 1017 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 AFG3L2Q9Y4W6 797 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 ZHX2Q9Y6X8 837 aa8.3□□□□□ -1.08
LIMD1-204ENST00000474665 U3KPZ7 1027 aaPredicted RBP8.3□□□□□ -1.08
LIMD1-204ENST00000474665 A0A1W2PRG0 241 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 SLC27A2O14975 620 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 NMT2O60551 498 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 SGPL1O95470 568 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 TFRCP02786 760 aaKnown RBP8.29□□□□□ -1.08
LIMD1-204ENST00000474665 CTGFP29279 349 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 GRK4P32298 578 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 LACTBP83111 547 aaPredicted RBP8.29□□□□□ -1.08
LIMD1-204ENST00000474665 PPIL2Q13356 520 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 KIF22Q14807 665 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 ABCB5Q2M3G0 1257 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 FAM47AQ5JRC9 791 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 TJAP1Q5JTD0 557 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 KIAA1755Q5JYT7 1200 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 CREB3L3Q68CJ9 461 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 ALYREFQ86V81 257 aaKnown RBP8.29□□□□□ -1.08
LIMD1-204ENST00000474665 ACER1Q8TDN7 264 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 STAG1Q8WVM7 1258 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 PAWRQ96IZ0 340 aaKnown RBP8.29□□□□□ -1.08
LIMD1-204ENST00000474665 UNC93B1Q9H1C4 597 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 CSADQ9Y600 493 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 PLIN4Q96Q06 1357 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 DOCK3Q8IZD9 2030 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 RLFQ13129 1914 aa8.29□□□□□ -1.08
LIMD1-204ENST00000474665 EYSQ5T1H1 3165 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 ZNF213O14771 459 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 ASNSP08243 561 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 NOVP48745 357 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 PPATQ06203 517 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 IMMTQ16891 758 aaKnown RBP8.28□□□□□ -1.08
LIMD1-204ENST00000474665 RCSD1Q6JBY9 416 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 CASC1Q6TDU7 716 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 KIAA1211Q6ZU35 1233 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 AMOTL1Q8IY63 956 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 FAM43AQ8N2R8 423 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 NEDD1Q8NHV4 660 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 BRI3BPQ8WY22 251 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 MYLIPQ8WY64 445 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 CCDC17Q96LX7 622 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 WDR18Q9BV38 432 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 TRIM34Q9BYJ4 488 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 GINM1Q9NU53 330 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 CTNNA3Q9UI47 895 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 SMCHD1A6NHR9 2005 aa8.28□□□□□ -1.08
LIMD1-204ENST00000474665 LOC285556D6RIA3 1793 aa8.27□□□□□ -1.08
LIMD1-204ENST00000474665 MUC3AQ02505 3323 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 TRIM75PA6NK02 468 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 USP17L5A8MUK1 530 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 B4E1Z4 1266 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 E7EWF7 191 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 CXCL11O14625 94 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 HSPA4P34932 840 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 PRMT2P55345 433 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 ANTXR2P58335 489 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 TFAP4Q01664 338 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 PDE4BQ07343 736 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 SPP2Q13103 211 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 RAB3GAP1Q15042 981 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 ADCK5Q3MIX3 580 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 TSGA10IPQ3SY00 556 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 ZNF697Q5TEC3 545 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 GPAT2Q6NUI2 795 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 MFSD6Q6ZSS7 791 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 TMEM179Q6ZVK1 233 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 CYB5R4Q7L1T6 521 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 MB21D2Q8IYB1 491 aaPredicted RBP8.27□□□□□ -1.09
LIMD1-204ENST00000474665 ZNF280CQ8ND82 737 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 RAET1EQ8TD07 263 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 DIS3LQ8TF46 1054 aaKnown RBP8.27□□□□□ -1.09
LIMD1-204ENST00000474665 CEP95Q96GE4 821 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 MKNK2Q9HBH9 465 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 SENP2Q9HC62 589 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 PICK1Q9NRD5 415 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 MTMR4Q9NYA4 1195 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 ZSWIM5Q9P217 1185 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 SRRDQ9UH36 339 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 ALPK3Q96L96 1907 aa8.27□□□□□ -1.09
LIMD1-204ENST00000474665 PARP14Q460N5 1801 aa8.26□□□□□ -1.09
LIMD1-204ENST00000474665 A0A0G2JLL6 359 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms