RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 SHCBP1Q8NEM2 672 aa16.15■□□□□ 0.18
GAPDH-208ENST00000474249 HOXC10Q9NYD6 342 aa16.15■□□□□ 0.18
GAPDH-208ENST00000474249 A0A0G2JMZ2 1700 aa16.14■□□□□ 0.17
GAPDH-208ENST00000474249 ADORA2AP29274 412 aa16.14■□□□□ 0.17
GAPDH-208ENST00000474249 SHHQ15465 462 aa16.14■□□□□ 0.17
GAPDH-208ENST00000474249 GJC2Q5T442 439 aaPredicted RBP16.14■□□□□ 0.17
GAPDH-208ENST00000474249 SPATC1LQ9H0A9 340 aa16.14■□□□□ 0.17
GAPDH-208ENST00000474249 CABP5Q9NP86 173 aa16.14■□□□□ 0.17
GAPDH-208ENST00000474249 IVNS1ABPQ9Y6Y0 642 aa16.14■□□□□ 0.17
GAPDH-208ENST00000474249 TCRBV5S4A2TA0A5A2 114 aa16.13■□□□□ 0.17
GAPDH-208ENST00000474249 SEPT4O43236 478 aa16.13■□□□□ 0.17
GAPDH-208ENST00000474249 ERCC3P19447 782 aa16.13■□□□□ 0.17
GAPDH-208ENST00000474249 CNGA1P29973 690 aa16.13■□□□□ 0.17
GAPDH-208ENST00000474249 MAP3K12Q12852 859 aa16.13■□□□□ 0.17
GAPDH-208ENST00000474249 C9orf50Q5SZB4 431 aa16.13■□□□□ 0.17
GAPDH-208ENST00000474249 WDR78Q5VTH9 848 aa16.13■□□□□ 0.17
GAPDH-208ENST00000474249 ABRAQ8N0Z2 381 aa16.13■□□□□ 0.17
GAPDH-208ENST00000474249 ARRDC4Q8NCT1 418 aa16.13■□□□□ 0.17
GAPDH-208ENST00000474249 LBHD1Q9BQE6 289 aaPredicted RBP16.13■□□□□ 0.17
GAPDH-208ENST00000474249 TTC28Q96AY4 2481 aa16.12■□□□□ 0.17
GAPDH-208ENST00000474249 TRIM43BA6NCK2 446 aa16.12■□□□□ 0.17
GAPDH-208ENST00000474249 DSG3P32926 999 aa16.12■□□□□ 0.17
GAPDH-208ENST00000474249 CEP85Q6P2H3 762 aa16.12■□□□□ 0.17
GAPDH-208ENST00000474249 TRIM43Q96BQ3 446 aaPredicted RBP16.12■□□□□ 0.17
GAPDH-208ENST00000474249 SEMA6BQ9H3T3 888 aa16.12■□□□□ 0.17
GAPDH-208ENST00000474249 CWC22Q9HCG8 908 aaKnown RBP16.12■□□□□ 0.17
GAPDH-208ENST00000474249 ADAMTS5Q9UNA0 930 aa16.12■□□□□ 0.17
GAPDH-208ENST00000474249 SMCHD1A6NHR9 2005 aa16.11■□□□□ 0.17
GAPDH-208ENST00000474249 PRAMEF19Q5SWL8 479 aa16.11■□□□□ 0.17
GAPDH-208ENST00000474249 SH3RF1Q7Z6J0 888 aa16.11■□□□□ 0.17
GAPDH-208ENST00000474249 DPP9Q86TI2 863 aa16.11■□□□□ 0.17
GAPDH-208ENST00000474249 CDX2Q99626 313 aaPredicted RBP16.11■□□□□ 0.17
GAPDH-208ENST00000474249 DCP1AQ9NPI6 582 aaPredicted RBP16.11■□□□□ 0.17
GAPDH-208ENST00000474249 MAGEB6P1A0A0J9YX57 407 aa16.1■□□□□ 0.17
GAPDH-208ENST00000474249 PDE6AP16499 860 aa16.1■□□□□ 0.17
GAPDH-208ENST00000474249 ITGB8P26012 769 aa16.1■□□□□ 0.17
GAPDH-208ENST00000474249 LRRC41Q15345 812 aa16.1■□□□□ 0.17
GAPDH-208ENST00000474249 TRIM60Q495X7 471 aa16.1■□□□□ 0.17
GAPDH-208ENST00000474249 MB21D1Q8N884 522 aa16.1■□□□□ 0.17
GAPDH-208ENST00000474249 FAM161BQ96MY7 647 aa16.1■□□□□ 0.17
GAPDH-208ENST00000474249 TTYH1Q9H313 450 aaPredicted RBP16.1■□□□□ 0.17
GAPDH-208ENST00000474249 MROH8Q9H579 483 aa16.1■□□□□ 0.17
GAPDH-208ENST00000474249 PDLIM7Q9NR12 457 aa16.1■□□□□ 0.17
GAPDH-208ENST00000474249 ATP11BQ9Y2G3 1177 aa16.1■□□□□ 0.17
GAPDH-208ENST00000474249 TMX2Q9Y320 296 aa16.1■□□□□ 0.17
GAPDH-208ENST00000474249 SMIM22K7EJ46 135 aa16.09■□□□□ 0.17
GAPDH-208ENST00000474249 POLR3DP05423 398 aaPredicted RBP16.09■□□□□ 0.17
GAPDH-208ENST00000474249 CYP2D6P10635 497 aa16.09■□□□□ 0.17
GAPDH-208ENST00000474249 SLC9C2Q5TAH2 1124 aa16.09■□□□□ 0.17
GAPDH-208ENST00000474249 ANO1Q5XXA6 986 aa16.09■□□□□ 0.17
GAPDH-208ENST00000474249 TMEM179Q6ZVK1 233 aa16.09■□□□□ 0.17
GAPDH-208ENST00000474249 SLC44A5Q8NCS7 719 aa16.09■□□□□ 0.17
GAPDH-208ENST00000474249 BADQ92934 168 aa16.09■□□□□ 0.17
GAPDH-208ENST00000474249 MAML3Q96JK9 1138 aa16.09■□□□□ 0.17
GAPDH-208ENST00000474249 MCM9Q9NXL9 1143 aa16.09■□□□□ 0.17
GAPDH-208ENST00000474249 EXOC6BQ9Y2D4 811 aa16.09■□□□□ 0.17
GAPDH-208ENST00000474249 PARP14Q460N5 1801 aa16.09■□□□□ 0.17
GAPDH-208ENST00000474249 ZNFX1Q9P2E3 1918 aaKnown RBP16.09■□□□□ 0.17
GAPDH-208ENST00000474249 ADCYAP1R1P41586 468 aa16.08■□□□□ 0.16
GAPDH-208ENST00000474249 SMAD3P84022 425 aaKnown RBP16.08■□□□□ 0.16
GAPDH-208ENST00000474249 TMEM132BQ14DG7 1078 aa16.08■□□□□ 0.16
GAPDH-208ENST00000474249 ZNF697Q5TEC3 545 aa16.08■□□□□ 0.16
GAPDH-208ENST00000474249 AACSQ86V21 672 aa16.08■□□□□ 0.16
GAPDH-208ENST00000474249 LCORLQ8N3X6 602 aa16.08■□□□□ 0.16
GAPDH-208ENST00000474249 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.08■□□□□ 0.16
GAPDH-208ENST00000474249 SDR42E1Q8WUS8 393 aa16.08■□□□□ 0.16
GAPDH-208ENST00000474249 ATG4CQ96DT6 458 aa16.08■□□□□ 0.16
GAPDH-208ENST00000474249 PRKAG2Q9UGJ0 569 aa16.08■□□□□ 0.16
GAPDH-208ENST00000474249 NRBP1Q9UHY1 535 aa16.08■□□□□ 0.16
GAPDH-208ENST00000474249 PHF24Q9UPV7 400 aa16.08■□□□□ 0.16
GAPDH-208ENST00000474249 CHD9Q3L8U1 2897 aa16.08■□□□□ 0.16
GAPDH-208ENST00000474249 ZNF532Q9HCE3 1301 aa16.07■□□□□ 0.16
GAPDH-208ENST00000474249 NAV1Q8NEY1 1877 aa16.07■□□□□ 0.16
GAPDH-208ENST00000474249 KBTBD13C9JR72 458 aa16.07■□□□□ 0.16
GAPDH-208ENST00000474249 EPHB4P54760 987 aa16.07■□□□□ 0.16
GAPDH-208ENST00000474249 TTF1Q15361 905 aaPredicted RBP16.07■□□□□ 0.16
GAPDH-208ENST00000474249 FAM47AQ5JRC9 791 aa16.07■□□□□ 0.16
GAPDH-208ENST00000474249 ERC1Q8IUD2 1116 aa16.07■□□□□ 0.16
GAPDH-208ENST00000474249 CLEC10AQ8IUN9 316 aa16.07■□□□□ 0.16
GAPDH-208ENST00000474249 DYNLL2Q96FJ2 89 aa16.07■□□□□ 0.16
GAPDH-208ENST00000474249 CRNKL1Q9BZJ0 848 aaKnown RBP16.07■□□□□ 0.16
GAPDH-208ENST00000474249 TANGO6Q9C0B7 1094 aa16.07■□□□□ 0.16
GAPDH-208ENST00000474249 AKR1B1P15121 316 aa16.06■□□□□ 0.16
GAPDH-208ENST00000474249 TLE2Q04725 743 aa16.06■□□□□ 0.16
GAPDH-208ENST00000474249 ZNF792Q3KQV3 632 aa16.06■□□□□ 0.16
GAPDH-208ENST00000474249 REPS2Q8NFH8 660 aa16.06■□□□□ 0.16
GAPDH-208ENST00000474249 RHPN1Q8TCX5 695 aa16.06■□□□□ 0.16
GAPDH-208ENST00000474249 VCPKMTQ9H867 229 aa16.06■□□□□ 0.16
GAPDH-208ENST00000474249 SWAP70Q9UH65 585 aa16.06■□□□□ 0.16
GAPDH-208ENST00000474249 MPHOSPH10O00566 681 aaKnown RBP16.05■□□□□ 0.16
GAPDH-208ENST00000474249 KIAA0355O15063 1070 aa16.05■□□□□ 0.16
GAPDH-208ENST00000474249 PRKAB2O43741 272 aa16.05■□□□□ 0.16
GAPDH-208ENST00000474249 ZNF865P0CJ78 1059 aaPredicted RBP16.05■□□□□ 0.16
GAPDH-208ENST00000474249 SLFNL1Q499Z3 407 aa16.05■□□□□ 0.16
GAPDH-208ENST00000474249 ITPRIPQ8IWB1 547 aa16.05■□□□□ 0.16
GAPDH-208ENST00000474249 SPICE1Q8N0Z3 855 aa16.05■□□□□ 0.16
GAPDH-208ENST00000474249 FERMT2Q96AC1 680 aa16.05■□□□□ 0.16
GAPDH-208ENST00000474249 IL1RAPL2Q9NP60 686 aa16.05■□□□□ 0.16
GAPDH-208ENST00000474249 SLC5A4Q9NY91 659 aa16.05■□□□□ 0.16
GAPDH-208ENST00000474249 DIS3Q9Y2L1 958 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms