RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ROBO3Q96MS0 1386 aa13.35□□□□□ -0.27
CKS1B-206ENST00000474215 CCL5P13501 91 aa13.35□□□□□ -0.27
CKS1B-206ENST00000474215 MAPK4P31152 587 aa13.35□□□□□ -0.27
CKS1B-206ENST00000474215 MTFR1Q15390 333 aa13.35□□□□□ -0.27
CKS1B-206ENST00000474215 KIAA1755Q5JYT7 1200 aa13.35□□□□□ -0.27
CKS1B-206ENST00000474215 LBX2Q6XYB7 198 aa13.35□□□□□ -0.27
CKS1B-206ENST00000474215 PLEKHM2Q8IWE5 1019 aa13.35□□□□□ -0.27
CKS1B-206ENST00000474215 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.35□□□□□ -0.27
CKS1B-206ENST00000474215 TANGO6Q9C0B7 1094 aa13.35□□□□□ -0.27
CKS1B-206ENST00000474215 OSBPL3Q9H4L5 887 aa13.35□□□□□ -0.27
CKS1B-206ENST00000474215 VCPKMTQ9H867 229 aa13.35□□□□□ -0.27
CKS1B-206ENST00000474215 HELLSQ9NRZ9 838 aa13.35□□□□□ -0.27
CKS1B-206ENST00000474215 SPDYE16A6NNV3 312 aaPredicted RBP13.34□□□□□ -0.27
CKS1B-206ENST00000474215 TRIM6-TRIM34B2RNG4 842 aa13.34□□□□□ -0.27
CKS1B-206ENST00000474215 CNMDO75829 334 aa13.34□□□□□ -0.27
CKS1B-206ENST00000474215 CCNA1P78396 465 aa13.34□□□□□ -0.27
CKS1B-206ENST00000474215 IRX6P78412 446 aaPredicted RBP13.34□□□□□ -0.27
CKS1B-206ENST00000474215 ATP2B2Q01814 1243 aa13.34□□□□□ -0.27
CKS1B-206ENST00000474215 CCDC129Q6ZRS4 1044 aa13.34□□□□□ -0.27
CKS1B-206ENST00000474215 ZNF444Q8N0Y2 327 aaPredicted RBP13.34□□□□□ -0.27
CKS1B-206ENST00000474215 SPICE1Q8N0Z3 855 aa13.34□□□□□ -0.27
CKS1B-206ENST00000474215 RNF208Q9H0X6 261 aa13.34□□□□□ -0.27
CKS1B-206ENST00000474215 NAPBQ9H115 298 aa13.34□□□□□ -0.27
CKS1B-206ENST00000474215 PORCNQ9H237 461 aa13.34□□□□□ -0.27
CKS1B-206ENST00000474215 MGAMO43451 1857 aa13.33□□□□□ -0.27
CKS1B-206ENST00000474215 FOXP2O15409 715 aa13.33□□□□□ -0.28
CKS1B-206ENST00000474215 PRDM1O75626 825 aa13.33□□□□□ -0.28
CKS1B-206ENST00000474215 INHAP05111 366 aa13.33□□□□□ -0.28
CKS1B-206ENST00000474215 GJB1P08034 283 aa13.33□□□□□ -0.28
CKS1B-206ENST00000474215 SLC3A2P08195 630 aaKnown RBP13.33□□□□□ -0.28
CKS1B-206ENST00000474215 PDE4BQ07343 736 aa13.33□□□□□ -0.28
CKS1B-206ENST00000474215 PPARAQ07869 468 aa13.33□□□□□ -0.28
CKS1B-206ENST00000474215 MCMDC2Q4G0Z9 681 aa13.33□□□□□ -0.28
CKS1B-206ENST00000474215 PLEKHH3Q7Z736 793 aa13.33□□□□□ -0.28
CKS1B-206ENST00000474215 NKX2-3Q8TAU0 364 aa13.33□□□□□ -0.28
CKS1B-206ENST00000474215 RILPL2Q969X0 211 aa13.33□□□□□ -0.28
CKS1B-206ENST00000474215 NUDT12Q9BQG2 462 aa13.33□□□□□ -0.28
CKS1B-206ENST00000474215 GOPCQ9HD26 462 aa13.33□□□□□ -0.28
CKS1B-206ENST00000474215 BTBD7Q9P203 1132 aa13.33□□□□□ -0.28
CKS1B-206ENST00000474215 NYAP2Q9P242 653 aa13.33□□□□□ -0.28
CKS1B-206ENST00000474215 WDR46O15213 610 aaKnown RBP13.32□□□□□ -0.28
CKS1B-206ENST00000474215 XRCC5P13010 732 aaKnown RBP13.32□□□□□ -0.28
CKS1B-206ENST00000474215 DSG3P32926 999 aa13.32□□□□□ -0.28
CKS1B-206ENST00000474215 GPR142Q7Z601 462 aa13.32□□□□□ -0.28
CKS1B-206ENST00000474215 SOCS4Q8WXH5 440 aa13.32□□□□□ -0.28
CKS1B-206ENST00000474215 FAM227BQ96M60 508 aa13.32□□□□□ -0.28
CKS1B-206ENST00000474215 UNC93B1Q9H1C4 597 aa13.32□□□□□ -0.28
CKS1B-206ENST00000474215 IGKV6D-41A0A0C4DH26 115 aa13.31□□□□□ -0.28
CKS1B-206ENST00000474215 A0A0D9SFI3 127 aa13.31□□□□□ -0.28
CKS1B-206ENST00000474215 RAD21O60216 631 aa13.31□□□□□ -0.28
CKS1B-206ENST00000474215 FLOT1O75955 427 aa13.31□□□□□ -0.28
CKS1B-206ENST00000474215 CYP2B6P20813 491 aa13.31□□□□□ -0.28
CKS1B-206ENST00000474215 GJA8P48165 433 aa13.31□□□□□ -0.28
CKS1B-206ENST00000474215 NMIQ13287 307 aaPredicted RBP13.31□□□□□ -0.28
CKS1B-206ENST00000474215 ALX1Q15699 326 aa13.31□□□□□ -0.28
CKS1B-206ENST00000474215 MORN1Q5T089 497 aa13.31□□□□□ -0.28
CKS1B-206ENST00000474215 VPS53Q5VIR6 699 aa13.31□□□□□ -0.28
CKS1B-206ENST00000474215 MB21D1Q8N884 522 aa13.31□□□□□ -0.28
CKS1B-206ENST00000474215 USP6NLQ92738 828 aa13.31□□□□□ -0.28
CKS1B-206ENST00000474215 CWC22Q9HCG8 908 aaKnown RBP13.31□□□□□ -0.28
CKS1B-206ENST00000474215 CLIP2Q9UDT6 1046 aa13.31□□□□□ -0.28
CKS1B-206ENST00000474215 RBBP6Q7Z6E9 1792 aaKnown RBP13.3□□□□□ -0.28
CKS1B-206ENST00000474215 F5H6K3 240 aa13.3□□□□□ -0.28
CKS1B-206ENST00000474215 HMGCRP04035 888 aa13.3□□□□□ -0.28
CKS1B-206ENST00000474215 TSPY3P0CV98 308 aa13.3□□□□□ -0.28
CKS1B-206ENST00000474215 TSPY8P0CW00 308 aa13.3□□□□□ -0.28
CKS1B-206ENST00000474215 SDSP20132 328 aa13.3□□□□□ -0.28
CKS1B-206ENST00000474215 RGS2P41220 211 aa13.3□□□□□ -0.28
CKS1B-206ENST00000474215 TFAP4Q01664 338 aa13.3□□□□□ -0.28
CKS1B-206ENST00000474215 CTDSPL2Q05D32 466 aa13.3□□□□□ -0.28
CKS1B-206ENST00000474215 KLRC3Q07444 240 aa13.3□□□□□ -0.28
CKS1B-206ENST00000474215 WDR78Q5VTH9 848 aa13.3□□□□□ -0.28
CKS1B-206ENST00000474215 TRMT44Q8IYL2 757 aaKnown RBP13.3□□□□□ -0.28
CKS1B-206ENST00000474215 NEDD1Q8NHV4 660 aa13.3□□□□□ -0.28
CKS1B-206ENST00000474215 MKL1Q969V6 931 aa13.3□□□□□ -0.28
CKS1B-206ENST00000474215 MTMR4Q9NYA4 1195 aa13.3□□□□□ -0.28
CKS1B-206ENST00000474215 ANAPC4Q9UJX5 808 aa13.3□□□□□ -0.28
CKS1B-206ENST00000474215 ADAMTS5Q9UNA0 930 aa13.3□□□□□ -0.28
CKS1B-206ENST00000474215 IVNS1ABPQ9Y6Y0 642 aa13.3□□□□□ -0.28
CKS1B-206ENST00000474215 SLC15A5A6NIM6 579 aa13.29□□□□□ -0.28
CKS1B-206ENST00000474215 STRNO43815 780 aa13.29□□□□□ -0.28
CKS1B-206ENST00000474215 SGPL1O95470 568 aa13.29□□□□□ -0.28
CKS1B-206ENST00000474215 FGAP02671 866 aa13.29□□□□□ -0.28
CKS1B-206ENST00000474215 CAPN2P17655 700 aa13.29□□□□□ -0.28
CKS1B-206ENST00000474215 PTPREP23469 700 aa13.29□□□□□ -0.28
CKS1B-206ENST00000474215 MAP2K5Q13163 448 aa13.29□□□□□ -0.28
CKS1B-206ENST00000474215 FAM47AQ5JRC9 791 aa13.29□□□□□ -0.28
CKS1B-206ENST00000474215 FAM83BQ5T0W9 1011 aa13.29□□□□□ -0.28
CKS1B-206ENST00000474215 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
CKS1B-206ENST00000474215 U2AF1L4Q8WU68 220 aaKnown RBP13.29□□□□□ -0.28
CKS1B-206ENST00000474215 TRIB2Q92519 343 aa13.29□□□□□ -0.28
CKS1B-206ENST00000474215 SHISA4Q96DD7 197 aa13.29□□□□□ -0.28
CKS1B-206ENST00000474215 ATG4CQ96DT6 458 aa13.29□□□□□ -0.28
CKS1B-206ENST00000474215 CEP95Q96GE4 821 aa13.29□□□□□ -0.28
CKS1B-206ENST00000474215 MOV10L1Q9BXT6 1211 aaKnown RBP13.29□□□□□ -0.28
CKS1B-206ENST00000474215 SPATC1LQ9H0A9 340 aa13.29□□□□□ -0.28
CKS1B-206ENST00000474215 PAK6Q9NQU5 681 aaPredicted RBP13.29□□□□□ -0.28
CKS1B-206ENST00000474215 SYNPO2Q9UMS6 1093 aa13.29□□□□□ -0.28
CKS1B-206ENST00000474215 MYH8P13535 1937 aa13.29□□□□□ -0.28
CKS1B-206ENST00000474215 KIAA0100Q14667 2235 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms